Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cre05.g237400 Chlamydomonas reinhardtii HOM05D004804 ORTHO05D005882 2.6e-186 655.2 323 100.0
A07p21740 Brassica napus HOM05D004804 ORTHO05D005882 4.4e-109 398.7 289 66.1
BolC6t37342H Brassica oleracea HOM05D004804 ORTHO05D005882 9.7e-109 397.5 289 66.1
BcaB02g07773 Brassica carinata HOM05D004804 ORTHO05D005882 2.2e-108 396.4 289 65.7
Aa31LG5G22830 Aethionema arabicum HOM05D004804 ORTHO05D005882 2.8e-108 396.0 287 64.8
BcaC08g44637 Brassica carinata HOM05D004804 ORTHO05D005882 2.8e-108 396.0 289 65.7
C06p21540 Brassica napus HOM05D004804 ORTHO05D005882 2.8e-108 396.0 289 65.7
Thhalv10016845m.g Eutrema salsugineum HOM05D004804 ORTHO05D005882 2.8e-108 396.0 285 65.6
BcaB01g00261 Brassica carinata HOM05D004804 ORTHO05D005882 4.8e-108 395.2 285 66.3
CANSAT80G2153 Cannabis sativa HOM05D004804 ORTHO05D005882 4.8e-108 395.2 288 64.9
FvH4_6g14490 Fragaria vesca HOM05D004804 ORTHO05D005882 4.8e-108 395.2 313 62.0
BolC4t22652H Brassica oleracea HOM05D004804 ORTHO05D005882 6.3e-108 394.8 285 65.3
Thhalv10010477m.g Eutrema salsugineum HOM05D004804 ORTHO05D005882 6.3e-108 394.8 285 66.3
AL5G34510 Arabidopsis lyrata HOM05D004804 ORTHO05D005882 8.2e-108 394.4 318 61.6
QL07p046693 Quercus lobata HOM05D004804 ORTHO05D005882 8.2e-108 394.4 287 65.5
AT3G53580 Arabidopsis thaliana HOM05D004804 ORTHO05D005882 1.1e-107 394.0 318 61.3
EL10Ac2g02842 Beta vulgaris HOM05D004804 ORTHO05D005882 1.1e-107 394.0 286 65.7
A05p08530 Brassica napus HOM05D004804 ORTHO05D005882 1.4e-107 393.7 285 65.3
A09p46600 Brassica napus HOM05D004804 ORTHO05D005882 1.4e-107 393.7 284 65.8
CARHR163490 Cardamine hirsuta HOM05D004804 ORTHO05D005882 1.4e-107 393.7 285 65.6
BraA05t19821Z Brassica rapa HOM05D004804 ORTHO05D005882 1.8e-107 393.3 285 65.3
C04p10610 Brassica napus HOM05D004804 ORTHO05D005882 2.4e-107 392.9 285 64.9
BraA07t29856Z Brassica rapa HOM05D004804 ORTHO05D005882 2.4e-107 392.9 290 65.5
Carub.0005s2015 Capsella rubella HOM05D004804 ORTHO05D005882 3.1e-107 392.5 285 65.6
FAN02G1589 Fragaria x ananassa HOM05D004804 ORTHO05D005882 3.1e-107 392.5 311 61.7
Potri.016G120900 Populus trichocarpa HOM05D004804 ORTHO05D005882 3.1e-107 392.5 288 64.2
FAN09G0808 Fragaria x ananassa HOM05D004804 ORTHO05D005882 4.1e-107 392.1 307 63.2
PGR004G0439 Punica granatum HOM05D004804 ORTHO05D005882 4.1e-107 392.1 287 64.5
Sp4g19750 Schrenkiella parvula HOM05D004804 ORTHO05D005882 4.1e-107 392.1 320 61.6
Sp5g08760 Schrenkiella parvula HOM05D004804 ORTHO05D005882 5.3e-107 391.7 285 64.9
Potri.006G102700 Populus trichocarpa HOM05D004804 ORTHO05D005882 7.0e-107 391.3 313 61.0
TWI53G1005 Tripterygium wilfordii HOM05D004804 ORTHO05D005882 1.2e-106 390.6 287 63.8
Ah.10g030750 Amaranthus hybridus HOM05D004804 ORTHO05D005882 1.6e-106 390.2 285 65.6
Mapoly0001s0200 Marchantia polymorpha HOM05D004804 ORTHO05D005882 1.6e-106 390.2 284 65.5
SGA_v2.0_scaffold126G33837 Striga asiatica HOM05D004804 ORTHO05D005882 1.6e-106 390.2 287 64.8
COL.COLO4_14869 Corchorus olitorius HOM05D004804 ORTHO05D005882 2.0e-106 389.8 315 61.0
Eucgr.K03171 Eucalyptus grandis HOM05D004804 ORTHO05D005882 2.0e-106 389.8 287 64.1
RcHm_v2.0_Chr3g0467571 Rosa chinensis HOM05D004804 ORTHO05D005882 2.0e-106 389.8 320 60.3
Hund13338 Selenicereus undatus HOM05D004804 ORTHO05D005882 2.0e-106 389.8 287 64.5
Sc01g0003910 Simmondsia chinensis HOM05D004804 ORTHO05D005882 2.0e-106 389.8 287 63.4
BraA09t40124Z Brassica rapa HOM05D004804 ORTHO05D005882 2.6e-106 389.4 287 64.8
Zm00001eb136710 Zea mays HOM05D004804 ORTHO05D005882 2.6e-106 389.4 316 60.1
AagrBONN_evm.TU.Sc2ySwM_228.1472 Anthoceros agrestis HOM05D004804 ORTHO05D005882 3.5e-106 389.0 300 63.0
Sed0001519 Sechium edule HOM05D004804 ORTHO05D005882 3.5e-106 389.0 292 63.4
Cc06_g03070 Coffea canephora HOM05D004804 ORTHO05D005882 4.5e-106 388.7 287 64.1
CsaV3_4G024670 Cucumis sativus L. HOM05D004804 ORTHO05D005882 4.5e-106 388.7 287 64.5
Migut.L01624 Erythranthe guttata HOM05D004804 ORTHO05D005882 4.5e-106 388.7 314 59.9
Peaxi162Scf00039g00093 Petunia axillaris HOM05D004804 ORTHO05D005882 4.5e-106 388.7 287 64.8
Solyc09g005700.3 Solanum lycopersicum HOM05D004804 ORTHO05D005882 5.9e-106 388.3 282 65.6
THA.LOC104806587 Tarenaya hassleriana HOM05D004804 ORTHO05D005882 1.0e-105 387.5 285 64.2
C08p28920 Brassica napus HOM05D004804 ORTHO05D005882 1.7e-105 386.7 284 64.8
AUR62026834 Chenopodium quinoa HOM05D004804 ORTHO05D005882 1.7e-105 386.7 286 64.0
MD12G1136700 Malus domestica HOM05D004804 ORTHO05D005882 2.2e-105 386.3 338 58.9
ECA238G1409 Erigeron canadensis HOM05D004804 ORTHO05D005882 2.9e-105 386.0 288 63.9
GSVIVG01025612001 Vitis vinifera HOM05D004804 ORTHO05D005882 2.9e-105 386.0 287 63.4
CAN.G125.11 Capsicum annuum HOM05D004804 ORTHO05D005882 3.8e-105 385.6 285 64.2
Lj2A100T74 Lonicera japonica HOM05D004804 ORTHO05D005882 3.8e-105 385.6 287 63.4
Haze_20724 Corylus avellana HOM05D004804 ORTHO05D005882 6.5e-105 384.8 287 63.4
Lalb_Chr25g0289471 Lupinus albus HOM05D004804 ORTHO05D005882 6.5e-105 384.8 287 64.1
Manes.08G076545 Manihot esculenta HOM05D004804 ORTHO05D005882 1.1e-104 384.0 287 63.8
Glyma.03G173400 Glycine max HOM05D004804 ORTHO05D005882 1.9e-104 383.3 316 59.8
Aqoxy4G03017 Aquilegia oxysepala HOM05D004804 ORTHO05D005882 2.5e-104 382.9 285 64.6
DCAR_009258 Daucus carota HOM05D004804 ORTHO05D005882 2.5e-104 382.9 287 63.4
Hma1.2p1_1481F.1_g286070 Hydrangea macrophylla HOM05D004804 ORTHO05D005882 2.5e-104 382.9 287 63.1
Nn2g12889 Nelumbo nucifera HOM05D004804 ORTHO05D005882 2.5e-104 382.9 288 62.2
PSO339G6548 Papaver somniferum HOM05D004804 ORTHO05D005882 2.5e-104 382.9 287 63.4
MD04G1119400 Malus domestica HOM05D004804 ORTHO05D005882 3.2e-104 382.5 287 63.1
SalBow4G1685 Salvia bowleyana HOM05D004804 ORTHO05D005882 3.2e-104 382.5 287 63.4
CiPaw.09G187800 Carya illinoinensis HOM05D004804 ORTHO05D005882 4.2e-104 382.1 287 63.1
Cfa017439 Carpinus fangiana HOM05D004804 ORTHO05D005882 5.5e-104 381.7 287 62.7
Glyma.19G174300 Glycine max HOM05D004804 ORTHO05D005882 5.5e-104 381.7 316 59.5
Lj1g0023900 Lotus japonicus HOM05D004804 ORTHO05D005882 7.2e-104 381.3 287 62.7
arahy.Tifrunner.gnm1.ann1.EYL599 Arachis hypogaea HOM05D004804 ORTHO05D005882 9.4e-104 380.9 287 63.4
CDE08G0350 Ceratophyllum demersum HOM05D004804 ORTHO05D005882 1.2e-103 380.6 286 63.3
ClCG04G008480 Citrullus lanatus HOM05D004804 ORTHO05D005882 1.2e-103 380.6 335 57.6
Phvul.001G170900 Phaseolus vulgaris HOM05D004804 ORTHO05D005882 1.6e-103 380.2 287 62.0
VMungo1383G1812 Vigna mungo HOM05D004804 ORTHO05D005882 1.6e-103 380.2 287 62.4
Migut.J00372 Erythranthe guttata HOM05D004804 ORTHO05D005882 2.1e-103 379.8 287 61.0
Dinv37213 Davidia involucrata HOM05D004804 ORTHO05D005882 2.7e-103 379.4 288 62.2
Medtr7g100345 Medicago truncatula HOM05D004804 ORTHO05D005882 2.7e-103 379.4 287 62.4
SalBow1G1981 Salvia bowleyana HOM05D004804 ORTHO05D005882 2.7e-103 379.4 287 63.1
Atru.chr8.1921 Acer truncatum HOM05D004804 ORTHO05D005882 3.6e-103 379.0 300 60.0
unitig_27.g24899 Utricularia gibba HOM05D002116 ORTHO05D005882 3.6e-103 379.0 281 63.7
Gohir.D04G118600 Gossypium hirsutum HOM05D004804 ORTHO05D005882 4.7e-103 378.6 315 58.7
Ciclev10012025m.g Citrus clementina HOM05D004804 ORTHO05D005882 6.1e-103 378.3 300 60.3
Lsat_1_v5_gn_2_111181 Lactuca sativa HOM05D004804 ORTHO05D005882 6.1e-103 378.3 316 59.5
Thecc.05G045900 Theobroma cacao HOM05D004804 ORTHO05D005882 6.1e-103 378.3 285 62.5
MCO16G320 Micromonas commoda HOM05D004804 ORTHO05D005882 8.0e-103 377.9 308 60.1
PSO384G4865 Papaver somniferum HOM05D004804 ORTHO05D005882 8.0e-103 377.9 287 62.7
HanXRQChr14g0453791 Helianthus annuus HOM05D004804 ORTHO05D005882 1.0e-102 377.5 308 58.4
Gorai.009G423800 Gossypium raimondii HOM05D004804 ORTHO05D005882 1.4e-102 377.1 316 58.5
Nitab4.5_0002995g0070 Nicotiana tabacum HOM05D004804 ORTHO05D005882 2.3e-102 376.3 280 64.6
TAR623G1260 Trochodendron aralioides HOM05D004804 ORTHO05D005882 3.0e-102 375.9 287 61.7
SMO118G0282 Selaginella moellendorffii HOM05D004804 ORTHO05D005882 4.0e-102 375.6 301 61.8
ATR0033G037 Amborella trichopoda HOM05D004804 ORTHO05D005882 5.2e-102 375.2 287 62.0
Ca_07739_v3 Cicer arietinum L. HOM05D004804 ORTHO05D005882 5.2e-102 375.2 287 62.0
Gohir.A04G079400 Gossypium hirsutum HOM05D004804 ORTHO05D005882 5.2e-102 375.2 315 58.1
Lalb_Chr20g0113121 Lupinus albus HOM05D004804 ORTHO05D005882 6.7e-102 374.8 287 62.7
TPR.G21455 Trifolium pratense HOM05D004804 ORTHO05D005882 6.7e-102 374.8 287 62.0
Duzib093G1125 Durio zibethinus HOM05D004804 ORTHO05D005882 1.2e-101 374.0 313 58.5
Actinidia05292 Actinidia chinensis HOM05D004804 ORTHO05D005882 2.6e-101 372.9 284 63.7
Ca_08795_v3 Cicer arietinum L. HOM05D004804 ORTHO05D005882 2.6e-101 372.9 287 61.7
MSTRG.5692 Avicennia marina HOM05D004804 ORTHO05D005882 3.3e-101 372.5 332 54.2
HPP92_019459 Vanilla planifolia HOM05D004804 ORTHO05D005882 8.2e-100 367.9 287 59.9
Oeu029811.2 Olea europaea HOM05D004804 ORTHO05D005882 5.3e-99 365.2 276 62.7
vmacro20115 Vaccinium macrocarpon HOM05D004804 ORTHO05D005882 2.0e-98 363.2 300 58.7
FAN14G5408 Fragaria x ananassa HOM05D004804 ORTHO05D005882 4.5e-98 362.1 313 58.5
Rhsim05G0187300 Rhododendron simsii HOM05D004804 ORTHO05D005882 5.9e-98 361.7 324 55.2
Pp3c10_3520 Physcomitrium patens HOM05D004804 ORTHO05D005882 2.2e-97 359.8 292 61.6
Actinidia19758 Actinidia chinensis HOM05D004804 ORTHO05D001149 3.8e-97 359.0 284 62.3
Nitab4.5_0005039g0030 Nicotiana tabacum HOM05D004804 ORTHO05D005882 3.2e-96 355.9 304 58.2
Sabra06G0079000 Salix brachista HOM05D004804 ORTHO05D005882 2.7e-95 352.8 290 59.0
Nitab4.5_0004851g0050 Nicotiana tabacum HOM05D004804 ORTHO05D005882 1.1e-91 340.9 399 45.9
BcaNung07017 Brassica carinata HOM05D004804 ORTHO05D005882 5.4e-91 338.6 261 63.2
CSS0039312 Camellia sinensis var. sinensis HOM05D004804 ORTHO05D001149 1.5e-88 330.5 262 62.2
MELO3C003100.2 Cucumis melo HOM05D004804 ORTHO05D005882 3.2e-88 329.3 339 51.9
AUR62037218 Chenopodium quinoa HOM05D004804 ORTHO05D005882 7.2e-88 328.2 248 62.9
BcaNung07160 Brassica carinata HOM05D004804 ORTHO05D005882 3.6e-87 325.9 283 57.2
PRCOL_00004448 Prasinoderma coloniale HOM05D004804 ORTHO05D005882 1.4e-86 323.9 293 58.4
BcaC07g39720 Brassica carinata HOM05D004804 ORTHO05D005882 7.5e-85 318.2 259 59.5
Psat3g121680 Pisum sativum HOM05D004804 ORTHO05D005882 2.8e-84 316.2 249 60.2
SMO116G0240 Selaginella moellendorffii HOM05D004804 ORTHO05D005882 2.9e-81 306.2 293 52.6
AUR62038459 Chenopodium quinoa HOM05D004804 ORTHO05D005882 2.0e-74 283.5 246 56.1
Zm00001eb028810 Zea mays HOM05D004804 ORTHO05D005882 1.3e-68 264.2 238 55.5
Sopen09g001590 Solanum pennellii HOM05D004804 ORTHO05D005882 2.2e-68 263.5 202 62.9
BolC8t50494H Brassica oleracea HOM05D004804 ORTHO05D005882 8.3e-68 261.5 247 53.0
Cpa.g.c31068.3 Carica papaya HOM05D004804 ORTHO05D005882 7.1e-59 231.9 173 60.7
Prupe.6G249100 Prunus persica HOM05D004804 ORTHO05D005882 2.7e-58 229.9 200 56.0
Cpa.g.c30481.1 Carica papaya HOM05D004804 ORTHO05D005882 5.6e-56 222.2 169 63.3
MD07G1084600 Malus domestica HOM05D004804 ORTHO05D005882 4.7e-47 192.6 133 66.2
MD07G1085800 Malus domestica HOM05D004804 ORTHO05D005882 6.4e-44 182.2 128 65.6
Medtr7g072350 Medicago truncatula HOM05D004804 ORTHO05D005882 7.1e-43 178.7 222 42.8
FvH4_5g27660 Fragaria vesca HOM05D004804 ORTHO05D005882 2.8e-39 166.8 118 63.6
AUR62014235 Chenopodium quinoa HOM05D004804 ORTHO05D005882 4.6e-34 149.4 247 38.1
FAN18G1921 Fragaria x ananassa HOM05D004804 ORTHO05D005882 9.6e-32 141.7 148 48.0
BcaC05g25676 Brassica carinata HOM05D004804 ORTHO05D005882 2.8e-31 140.2 153 50.3
SEGI_18757 Sequoiadendron giganteum HOM05D004804 ORTHO05D005882 6.2e-31 139.0 97 61.9
BcaC03g18267 Brassica carinata HOM05D004804 ORTHO05D005882 1.6e-26 124.4 153 47.1
BcaC03g18268 Brassica carinata HOM05D004804 ORTHO05D005882 2.5e-24 117.1 153 46.4
Hma1.2p1_0683F.1_g202920 Hydrangea macrophylla HOM05D004804 ORTHO05D005882 1.4e-22 111.3 71 69.0
BcaC01g02299 Brassica carinata HOM05D004804 ORTHO05D005882 4.0e-22 109.8 153 41.8
SEGI_29945 Sequoiadendron giganteum HOM05D004804 ORTHO05D005882 1.2e-21 108.2 112 50.9
SEGI_13543 Sequoiadendron giganteum HOM05D004804 ORTHO05D005882 7.9e-18 95.5 61 72.1
Atru.chr5.1411 Acer truncatum HOM05D004804 ORTHO05D005882 2.2e-15 87.4 57 66.7
MSTRG.19109 Avicennia marina HOM05D004804 ORTHO05D005882 5.5e-11 72.8 74 50.0
FAN13G1509 Fragaria x ananassa HOM05D004804 ORTHO05D022561 5.5e-11 72.8 41 75.6
BolC5t30247H Brassica oleracea HOM05D003490 ORTHO05D039708 7.2e-11 72.4 57 57.9
C03p66880 Brassica napus HOM05D004804 ORTHO05D005882 2.1e-10 70.9 57 56.1
BolC3t18958H Brassica oleracea HOM05D004804 ORTHO05D005882 6.1e-10 69.3 49 63.3
Rhsim01G0214400 Rhododendron simsii HOM05D004804 ORTHO05D000007 5.7e-08 62.8 35 68.6
RcHm_v2.0_Chr6g0244381 Rosa chinensis HOM05D004556 ORTHO05D005298 6.3e-07 59.3 37 70.3
C03p66890 Brassica napus HOM05D004804 ORTHO05D005882 3.1e-06 57.0 65 46.2
BolC3t18959H Brassica oleracea HOM05D004804 ORTHO05D005882 3.1e-06 57.0 65 46.2


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