Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cre05.g232850 Chlamydomonas reinhardtii HOM05D005352 ORTHO05D006371 4.0e-35 151.0 82 100.0
Migut.H01937 Erythranthe guttata HOM05D005352 ORTHO05D006371 2.5e-13 78.6 59 64.4
ClCG10G006950 Citrullus lanatus HOM05D005352 ORTHO05D006371 4.3e-13 77.8 53 71.7
MELO3C016512.2 Cucumis melo HOM05D005352 ORTHO05D006371 4.3e-13 77.8 53 71.7
CsaV3_3G006320 Cucumis sativus L. HOM05D005352 ORTHO05D006371 4.3e-13 77.8 53 71.7
Sed0025683 Sechium edule HOM05D005352 ORTHO05D006371 4.3e-13 77.8 53 71.7
Actinidia35250 Actinidia chinensis HOM05D005352 ORTHO05D006371 5.7e-13 77.4 54 70.4
CSS0040687 Camellia sinensis var. sinensis HOM05D005352 ORTHO05D006371 7.4e-13 77.0 54 68.5
TWI39G1034 Tripterygium wilfordii HOM05D005352 ORTHO05D006371 7.4e-13 77.0 56 66.1
unitig_26.g9534 Utricularia gibba HOM05D005352 ORTHO05D006371 7.4e-13 77.0 59 64.4
vmacro11864 Vaccinium macrocarpon HOM05D002732 ORTHO05D002955 7.4e-13 77.0 54 68.5
Rhsim01G0293100 Rhododendron simsii HOM05D005352 ORTHO05D006371 9.6e-13 76.6 52 67.3
Cc05_g12050 Coffea canephora HOM05D005352 ORTHO05D006371 1.6e-12 75.9 60 63.3
Nitab4.5_0002383g0040 Nicotiana tabacum HOM05D005352 ORTHO05D006371 1.6e-12 75.9 56 66.1
Zm00001eb312990 Zea mays HOM05D005352 ORTHO05D006371 1.6e-12 75.9 52 67.3
Solyc10g007010.1 Solanum lycopersicum HOM05D005352 ORTHO05D006371 2.1e-12 75.5 53 67.9
Sopen10g002920 Solanum pennellii HOM05D005352 ORTHO05D006371 2.1e-12 75.5 53 67.9
PGSC0003DMG400025038 Solanum tuberosum HOM05D005352 ORTHO05D006371 2.1e-12 75.5 53 67.9
Dinv20171 Davidia involucrata HOM05D005352 ORTHO05D006371 2.8e-12 75.1 54 68.5
Migut.M00807 Erythranthe guttata HOM05D005352 ORTHO05D006371 2.8e-12 75.1 51 66.7
Nitab4.5_0000207g0090 Nicotiana tabacum HOM05D005352 ORTHO05D006371 2.8e-12 75.1 53 67.9
QL08p021806 Quercus lobata HOM05D005352 ORTHO05D006371 2.8e-12 75.1 56 64.3
Rhsim06G0198800 Rhododendron simsii HOM05D005352 ORTHO05D006371 2.8e-12 75.1 53 67.9
Thecc.07G089400 Theobroma cacao HOM05D005352 ORTHO05D006371 2.8e-12 75.1 57 64.9
Dinv04306 Davidia involucrata HOM05D005352 ORTHO05D006371 3.7e-12 74.7 54 68.5
Gohir.A04G030400 Gossypium hirsutum HOM05D005352 ORTHO05D006371 3.7e-12 74.7 54 66.7
Gohir.D05G355700 Gossypium hirsutum HOM05D005352 ORTHO05D006371 3.7e-12 74.7 54 66.7
Gorai.009G388100 Gossypium raimondii HOM05D005352 ORTHO05D006371 3.7e-12 74.7 54 66.7
Cpa.g.sc80.62 Carica papaya HOM05D005352 ORTHO05D006371 4.8e-12 74.3 54 66.7
COL.COLO4_27168 Corchorus olitorius HOM05D005352 ORTHO05D006371 4.8e-12 74.3 54 66.7
MBI03_g28426_MAGBIO Magnolia biondii HOM05D005352 ORTHO05D006371 4.8e-12 74.3 52 67.3
Cfa020587 Carpinus fangiana HOM05D005352 ORTHO05D006371 6.2e-12 73.9 57 63.2
TAR629G0728 Trochodendron aralioides HOM05D005352 ORTHO05D006371 6.2e-12 73.9 54 64.8
TAR629G2863 Trochodendron aralioides HOM05D000001 ORTHO05D000424 6.2e-12 73.9 54 64.8
GSVIVG01014339001 Vitis vinifera HOM05D005352 ORTHO05D006371 6.2e-12 73.9 53 67.9
Hma1.2p1_0885F.1_g232590 Hydrangea macrophylla HOM05D005352 ORTHO05D006371 8.2e-12 73.6 52 67.3
Lj5g0028047 Lotus japonicus HOM05D005352 ORTHO05D006371 8.2e-12 73.6 54 68.5
Nn7g36574 Nelumbo nucifera HOM05D005352 ORTHO05D006371 8.2e-12 73.6 54 68.5
SGA_v2.0_scaffold34G13815 Striga asiatica HOM05D005352 ORTHO05D006371 8.2e-12 73.6 62 61.3
Aa31LG10G2070 Aethionema arabicum HOM05D005352 ORTHO05D006371 1.1e-11 73.2 58 65.5
Duzib268G0922 Durio zibethinus HOM05D005352 ORTHO05D006371 1.1e-11 73.2 54 66.7
Nn2g14920 Nelumbo nucifera HOM05D005352 ORTHO05D006371 1.1e-11 73.2 51 66.7
Lsat_1_v5_gn_9_96160 Lactuca sativa HOM05D005352 ORTHO05D006371 1.8e-11 72.4 60 60.0
Ah.04g164870 Amaranthus hybridus HOM05D005352 ORTHO05D006371 2.4e-11 72.0 52 69.2
Ah.06g184190 Amaranthus hybridus HOM05D005352 ORTHO05D006371 2.4e-11 72.0 52 69.2
DCAR_013105 Daucus carota HOM05D005352 ORTHO05D006371 2.4e-11 72.0 54 64.8
Eucgr.F03316 Eucalyptus grandis HOM05D005352 ORTHO05D006371 2.4e-11 72.0 53 64.2
FvH4_3g19981 Fragaria vesca HOM05D005352 ORTHO05D006371 2.4e-11 72.0 52 65.4
FAN11G1098 Fragaria x ananassa HOM05D005352 ORTHO05D006371 2.4e-11 72.0 52 65.4
FAN16G1707 Fragaria x ananassa HOM05D005352 ORTHO05D006371 2.4e-11 72.0 52 65.4
FAN21G3346 Fragaria x ananassa HOM05D000257 ORTHO05D009129 2.4e-11 72.0 52 65.4
FAN25G2626 Fragaria x ananassa HOM05D005352 ORTHO05D006371 2.4e-11 72.0 52 65.4
Lsat_1_v5_gn_6_15501 Lactuca sativa HOM05D005352 ORTHO05D006371 2.4e-11 72.0 57 59.6
Lj3g0008482 Lotus japonicus HOM05D005352 ORTHO05D006371 2.4e-11 72.0 54 64.8
Os02g0794600 Oryza sativa ssp. japonica HOM05D005352 ORTHO05D006371 2.4e-11 72.0 52 67.3
Peaxi162Scf00027g00225 Petunia axillaris HOM05D005352 ORTHO05D006371 2.4e-11 72.0 56 62.5
RcHm_v2.0_Chr5g0033731 Rosa chinensis HOM05D005352 ORTHO05D006371 2.4e-11 72.0 54 64.8
BcaB04g20935 Brassica carinata HOM05D002732 ORTHO05D006371 3.1e-11 71.6 55 63.6
Ciclev10010072m.g Citrus clementina HOM05D005352 ORTHO05D006371 3.1e-11 71.6 54 64.8
Thhalv10021884m.g Eutrema salsugineum HOM05D005352 ORTHO05D006371 3.1e-11 71.6 62 61.3
Lalb_Chr01g0006571 Lupinus albus HOM05D005352 ORTHO05D006371 3.1e-11 71.6 57 63.2
Carub.0001s4218 Capsella rubella HOM05D005352 ORTHO05D006371 4.0e-11 71.2 55 63.6
Haze_09426 Corylus avellana HOM05D002732 ORTHO05D002955 4.0e-11 71.2 56 58.9
BcaC08g43490 Brassica carinata HOM05D002732 ORTHO05D002955 5.3e-11 70.9 50 70.0
C06p08730 Brassica napus HOM05D005352 ORTHO05D006371 5.3e-11 70.9 50 70.0
BolC1t04875H Brassica oleracea HOM05D002732 ORTHO05D002955 5.3e-11 70.9 47 70.2
BolC6t35949H Brassica oleracea HOM05D005352 ORTHO05D006371 5.3e-11 70.9 50 70.0
CAN.G199.4 Capsicum annuum HOM05D005352 ORTHO05D006371 5.3e-11 70.9 52 63.5
CARHR090370 Cardamine hirsuta HOM05D005352 ORTHO05D006371 5.3e-11 70.9 50 70.0
HanXRQChr12g0364261 Helianthus annuus HOM05D005352 ORTHO05D006371 5.3e-11 70.9 47 68.1
Hma1.2p1_0898F.1_g234370 Hydrangea macrophylla HOM05D005352 ORTHO05D006371 5.3e-11 70.9 52 67.3
Oeu011684.1 Olea europaea HOM05D005352 ORTHO05D006371 5.3e-11 70.9 57 59.6
Peaxi162Scf00069g01430 Petunia axillaris HOM05D005352 ORTHO05D006371 5.3e-11 70.9 49 67.3
Sc03g0009970 Simmondsia chinensis HOM05D005352 ORTHO05D006371 5.3e-11 70.9 53 66.0
THA.LOC104818076 Tarenaya hassleriana HOM05D005352 ORTHO05D006371 5.3e-11 70.9 59 61.0
BcaC09g48499 Brassica carinata HOM05D005352 ORTHO05D006371 6.9e-11 70.5 47 70.2
C01p49110 Brassica napus HOM05D002732 ORTHO05D002955 6.9e-11 70.5 47 70.2
CAN.G162.62 Capsicum annuum HOM05D005352 ORTHO05D006371 6.9e-11 70.5 55 61.8
Gohir.D11G297800 Gossypium hirsutum HOM05D005352 ORTHO05D006371 6.9e-11 70.5 54 63.0
Gorai.007G322700 Gossypium raimondii HOM05D005352 ORTHO05D006371 6.9e-11 70.5 54 63.0
Medtr0271s0050 Medicago truncatula HOM05D005352 ORTHO05D006371 6.9e-11 70.5 49 65.3
Medtr0648s0010 Medicago truncatula HOM05D005352 ORTHO05D006371 6.9e-11 70.5 49 65.3
Medtr1g092430 Medicago truncatula HOM05D005352 ORTHO05D006371 6.9e-11 70.5 49 65.3
MCO06G059 Micromonas commoda HOM05D005352 ORTHO05D006371 6.9e-11 70.5 51 66.7
TPR.G39025 Trifolium pratense HOM05D005352 ORTHO05D006371 6.9e-11 70.5 49 63.3
AL1G61380 Arabidopsis lyrata HOM05D005352 ORTHO05D006371 9.0e-11 70.1 50 70.0
arahy.Tifrunner.gnm1.ann1.I7TC1S Arachis hypogaea HOM05D005352 ORTHO05D006371 9.0e-11 70.1 52 67.3
A01p38690 Brassica napus HOM05D005352 ORTHO05D006371 9.0e-11 70.1 47 70.2
AUR62034294 Chenopodium quinoa HOM05D002732 ORTHO05D002955 9.0e-11 70.1 52 65.4
Dinv03511 Davidia involucrata HOM05D005352 ORTHO05D006371 9.0e-11 70.1 54 63.0
HanXRQChr13g0406971 Helianthus annuus HOM05D005352 ORTHO05D006371 9.0e-11 70.1 56 62.5
Nitab4.5_0001796g0040 Nicotiana tabacum HOM05D005352 ORTHO05D006371 9.0e-11 70.1 60 61.7
Os09g0420700 Oryza sativa ssp. japonica HOM05D005352 ORTHO05D006371 9.0e-11 70.1 52 65.4
PGR031G2765 Punica granatum HOM05D005352 ORTHO05D006371 9.0e-11 70.1 53 64.2
AL3G27810 Arabidopsis lyrata HOM05D005352 ORTHO05D006371 1.2e-10 69.7 60 60.0
AT3G15352 Arabidopsis thaliana HOM05D005352 ORTHO05D006371 1.2e-10 69.7 60 60.0
arahy.Tifrunner.gnm1.ann1.UV8WYD Arachis hypogaea HOM05D005352 ORTHO05D006371 1.2e-10 69.7 49 69.4
CBR_g8998 Chara braunii HOM05D004567 ORTHO05D005726 1.2e-10 69.7 63 57.1
Ca_24271_v3 Cicer arietinum L. HOM05D005352 ORTHO05D006371 1.2e-10 69.7 52 65.4
PSO384G2174 Papaver somniferum HOM05D005352 ORTHO05D006371 1.2e-10 69.7 56 62.5
Phvul.004G175600 Phaseolus vulgaris HOM05D005352 ORTHO05D006371 1.2e-10 69.7 54 63.0
Psat5g244480 Pisum sativum HOM05D005352 ORTHO05D006371 1.2e-10 69.7 49 65.3
Psat5g287360 Pisum sativum HOM05D005352 ORTHO05D006371 1.2e-10 69.7 49 65.3
Potri.001G400000 Populus trichocarpa HOM05D005352 ORTHO05D006371 1.2e-10 69.7 52 63.5
Sabra11G0103700 Salix brachista HOM05D002732 ORTHO05D002955 1.2e-10 69.7 52 63.5
vmacro09532 Vaccinium macrocarpon HOM05D005352 ORTHO05D006371 1.2e-10 69.7 54 64.8
ATR0568G005 Amborella trichopoda HOM05D005352 ORTHO05D006371 1.5e-10 69.3 48 66.7
AT1G53030 Arabidopsis thaliana HOM05D005352 ORTHO05D006371 1.5e-10 69.3 55 63.6
A06p01290 Brassica napus HOM05D005352 ORTHO05D006371 1.5e-10 69.3 50 70.0
BraA06t23355Z Brassica rapa HOM05D005352 ORTHO05D006371 1.5e-10 69.3 50 70.0
Carub.0003s1504 Capsella rubella HOM05D005352 ORTHO05D006371 1.5e-10 69.3 57 61.4
CARHR043250 Cardamine hirsuta HOM05D005352 ORTHO05D006371 1.5e-10 69.3 50 70.0
CiPaw.11G169400 Carya illinoinensis HOM05D005352 ORTHO05D006371 1.5e-10 69.3 57 59.6
AUR62019420 Chenopodium quinoa HOM05D005352 ORTHO05D006371 1.5e-10 69.3 52 65.4
Manes.15G086800 Manihot esculenta HOM05D005352 ORTHO05D006371 1.5e-10 69.3 53 62.3
Nitab4.5_0001336g0010 Nicotiana tabacum HOM05D005352 ORTHO05D006371 1.5e-10 69.3 60 61.7
Potri.011G119000 Populus trichocarpa HOM05D005352 ORTHO05D006371 1.5e-10 69.3 54 59.3
Sp3g13580 Schrenkiella parvula HOM05D005352 ORTHO05D006371 1.5e-10 69.3 60 60.0
Ca_01841_v3 Cicer arietinum L. HOM05D005352 ORTHO05D006371 2.0e-10 68.9 47 68.1
Glyma.06G242800 Glycine max HOM05D005352 ORTHO05D006371 2.0e-10 68.9 57 59.6
Glyma.12G154400 Glycine max HOM05D005352 ORTHO05D006371 2.0e-10 68.9 57 59.6
Prupe.4G181400 Prunus persica HOM05D005352 ORTHO05D006371 2.0e-10 68.9 52 65.4
Aa31LG8G2560 Aethionema arabicum HOM05D004832 ORTHO05D005821 2.6e-10 68.6 60 60.0
DCAR_017140 Daucus carota HOM05D005352 ORTHO05D006371 2.6e-10 68.6 54 63.0
Manes.03G110400 Manihot esculenta HOM05D005352 ORTHO05D006371 2.6e-10 68.6 52 63.5
EL10Ac4g08174 Beta vulgaris HOM05D005352 ORTHO05D006371 3.4e-10 68.2 44 68.2
Lalb_Chr25g0286381 Lupinus albus HOM05D005352 ORTHO05D006371 3.4e-10 68.2 47 66.0
MBI06_g21936_MAGBIO Magnolia biondii HOM05D005352 ORTHO05D006371 3.4e-10 68.2 47 68.1
Pp3c15_5560 Physcomitrium patens HOM05D005352 ORTHO05D006371 3.4e-10 68.2 54 59.3
Sabra16G0262400 Salix brachista HOM05D005352 ORTHO05D006371 3.4e-10 68.2 52 61.5
HPP92_010342 Vanilla planifolia HOM05D005352 ORTHO05D006371 3.4e-10 68.2 47 66.0
MD03G1227400 Malus domestica HOM05D005352 ORTHO05D006371 4.5e-10 67.8 52 63.5
MD03G1227600 Malus domestica HOM05D005352 ORTHO05D006371 4.5e-10 67.8 52 63.5
MD11G1246900 Malus domestica HOM05D005352 ORTHO05D006371 4.5e-10 67.8 52 63.5
ECA240G0949 Erigeron canadensis HOM05D005352 ORTHO05D006371 5.8e-10 67.4 44 68.2
SEGI_39587 Sequoiadendron giganteum HOM05D005352 ORTHO05D006371 5.8e-10 67.4 53 62.3
Solyc07g063160.2 Solanum lycopersicum HOM05D005352 ORTHO05D006371 5.8e-10 67.4 60 60.0
Sopen07g031350 Solanum pennellii HOM05D005352 ORTHO05D006371 5.8e-10 67.4 60 60.0
PGSC0003DMG400012418 Solanum tuberosum HOM05D005352 ORTHO05D006371 5.8e-10 67.4 60 60.0
THA.LOC104810475 Tarenaya hassleriana HOM05D005352 ORTHO05D006371 5.8e-10 67.4 60 55.0
AagrBONN_evm.TU.Sc2ySwM_228.196 Anthoceros agrestis HOM05D005352 ORTHO05D006371 7.6e-10 67.0 47 61.7
Thhalv10011917m.g Eutrema salsugineum HOM05D005352 ORTHO05D006371 7.6e-10 67.0 47 68.1
ATR0736G058 Amborella trichopoda HOM05D005352 ORTHO05D006371 1.0e-09 66.6 46 67.4
Aqoxy7G00104 Aquilegia oxysepala HOM05D005352 ORTHO05D006371 1.0e-09 66.6 45 68.9
Gohir.A11G284900 Gossypium hirsutum HOM05D005352 ORTHO05D006371 2.2e-09 65.5 54 61.1
Mapoly0075s0017 Marchantia polymorpha HOM05D005352 ORTHO05D006371 2.9e-09 65.1 46 63.0
arahy.Tifrunner.gnm1.ann1.BBI5VM Arachis hypogaea HOM05D005352 ORTHO05D006371 5.0e-09 64.3 46 58.7
arahy.Tifrunner.gnm1.ann1.XK3P9A Arachis hypogaea HOM05D005352 ORTHO05D006371 5.0e-09 64.3 46 58.7
SMO358G0354 Selaginella moellendorffii HOM05D005352 ORTHO05D006371 1.9e-08 62.4 44 63.6
CSS0006050 Camellia sinensis var. sinensis HOM05D005352 ORTHO05D006371 2.1e-07 58.9 46 63.0
CSS0042186 Camellia sinensis var. sinensis HOM05D005352 ORTHO05D006371 2.1e-07 58.9 46 63.0
CiPaw.12G118100 Carya illinoinensis HOM05D005352 ORTHO05D006371 2.1e-07 58.9 43 65.1


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