Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cre04.g233302 Chlamydomonas reinhardtii HOM05D018848 ORTHO05D020402 0.0e+00 1331.2 680 100.0
Cre08.g359500 Chlamydomonas reinhardtii HOM05D018848 ORTHO05D020402 8.4e-203 711.1 712 55.3
CBR_g41742 Chara braunii HOM05D018848 ORTHO05D020402 1.3e-115 421.4 661 37.1
Cre08.g358536 Chlamydomonas reinhardtii HOM05D018848 ORTHO05D020402 1.3e-54 218.8 119 91.6
PRCOL_00001365 Prasinoderma coloniale HOM05D018848 ORTHO05D020402 2.1e-12 78.6 156 35.3
Cre08.g370200 Chlamydomonas reinhardtii HOM05D018848 ORTHO05D020402 4.8e-09 67.4 156 32.7
MCO04G444 Micromonas commoda HOM05D018848 ORTHO05D020402 1.1e-08 66.2 105 36.2
C07p55810 Brassica napus HOM05D000590 ORTHO05D001713 7.0e-08 63.5 136 33.1
SEGI_41134 Sequoiadendron giganteum HOM05D000590 ORTHO05D001713 7.0e-08 63.5 136 30.1
BolC7t46060H Brassica oleracea HOM05D000590 ORTHO05D001713 9.1e-08 63.2 136 33.1
THA.LOC104800295 Tarenaya hassleriana HOM05D000590 ORTHO05D001713 2.7e-07 61.6 137 33.6
Carub.0008s1359 Capsella rubella HOM05D000590 ORTHO05D001713 3.5e-07 61.2 136 30.1
A03p57600 Brassica napus HOM05D000590 ORTHO05D001713 5.9e-07 60.5 136 33.1
BraA03t14827Z Brassica rapa HOM05D000590 ORTHO05D001713 5.9e-07 60.5 136 33.1
Thhalv10024299m.g Eutrema salsugineum HOM05D000590 ORTHO05D001713 5.9e-07 60.5 136 32.4
AL8G28130 Arabidopsis lyrata HOM05D000590 ORTHO05D001713 7.7e-07 60.1 136 30.9
Lalb_Chr11g0066801 Lupinus albus HOM05D000590 ORTHO05D001713 7.7e-07 60.1 136 31.6
Psat5g077640 Pisum sativum HOM05D000590 ORTHO05D001713 7.7e-07 60.1 136 31.6
Aqoxy7G03278 Aquilegia oxysepala HOM05D000966 ORTHO05D002384 1.0e-06 59.7 132 33.3
Lsat_1_v5_gn_9_58321 Lactuca sativa HOM05D000590 ORTHO05D001713 1.0e-06 59.7 136 32.4
Pp3c3_23770 Physcomitrium patens HOM05D000590 ORTHO05D001713 1.0e-06 59.7 139 30.9
Sp7g25880 Schrenkiella parvula HOM05D000590 ORTHO05D001713 1.0e-06 59.7 134 29.9
TWI32G0919 Tripterygium wilfordii HOM05D000966 ORTHO05D002384 1.0e-06 59.7 154 28.6
GSVIVG01038708001 Vitis vinifera HOM05D000590 ORTHO05D001713 1.0e-06 59.7 136 30.9
HanXRQChr09g0252891 Helianthus annuus HOM05D000590 ORTHO05D001713 1.3e-06 59.3 136 31.6
A10p10900 Brassica napus HOM05D000590 ORTHO05D001713 1.7e-06 58.9 136 30.1
C09p43290 Brassica napus HOM05D000590 ORTHO05D001713 1.7e-06 58.9 136 30.1
BolC9t57210H Brassica oleracea HOM05D000590 ORTHO05D001713 1.7e-06 58.9 136 30.1
BraA10t43178Z Brassica rapa HOM05D000590 ORTHO05D001713 1.7e-06 58.9 136 30.1
Aa31LG3G9600 Aethionema arabicum HOM05D000590 ORTHO05D001713 2.3e-06 58.5 136 30.9
CARHR235610 Cardamine hirsuta HOM05D000590 ORTHO05D001713 2.3e-06 58.5 136 30.9
CANSAT21G0899 Cannabis sativa HOM05D000590 ORTHO05D001713 2.9e-06 58.2 136 31.6
CiPaw.05G251600 Carya illinoinensis HOM05D000590 ORTHO05D001713 2.9e-06 58.2 136 30.9
Lsat_1_v5_gn_7_50901 Lactuca sativa HOM05D000966 ORTHO05D002384 2.9e-06 58.2 132 32.6
SEGI_27414 Sequoiadendron giganteum HOM05D000590 ORTHO05D001713 2.9e-06 58.2 134 26.9
CiPaw.02G040600 Carya illinoinensis HOM05D000590 ORTHO05D001713 3.8e-06 57.8 134 28.4
Haze_00225 Corylus avellana HOM05D000590 ORTHO05D001713 3.8e-06 57.8 139 32.4
MELO3C008490.2 Cucumis melo HOM05D000590 ORTHO05D001713 3.8e-06 57.8 134 28.4
ECA232G2153 Erigeron canadensis HOM05D000590 ORTHO05D001713 3.8e-06 57.8 136 31.6
Sp6g15560 Schrenkiella parvula HOM05D000590 ORTHO05D001713 3.8e-06 57.8 136 29.4
TWI39G0115 Tripterygium wilfordii HOM05D000590 ORTHO05D001713 3.8e-06 57.8 136 30.1
arahy.Tifrunner.gnm1.ann1.E3AN2D Arachis hypogaea HOM05D000590 ORTHO05D001713 5.0e-06 57.4 136 30.9
arahy.Tifrunner.gnm1.ann1.SPP5W5 Arachis hypogaea HOM05D000590 ORTHO05D001713 5.0e-06 57.4 136 30.9
CARHR266550 Cardamine hirsuta HOM05D000590 ORTHO05D001713 5.0e-06 57.4 136 30.1
COL.COLO4_11266 Corchorus olitorius HOM05D000590 ORTHO05D001713 5.0e-06 57.4 139 31.7
CsaV3_3G019960 Cucumis sativus L. HOM05D000590 ORTHO05D001713 5.0e-06 57.4 134 28.4
Dinv35113 Davidia involucrata HOM05D000590 ORTHO05D001713 5.0e-06 57.4 134 26.9
ECA240G3489 Erigeron canadensis HOM05D000966 ORTHO05D002384 5.0e-06 57.4 132 32.6
Thhalv10012524m.g Eutrema salsugineum HOM05D000590 ORTHO05D001713 5.0e-06 57.4 136 30.1
FAN03G3103 Fragaria x ananassa HOM05D000590 ORTHO05D001713 5.0e-06 57.4 136 30.9
Manes.14G006400 Manihot esculenta HOM05D000590 ORTHO05D001713 5.0e-06 57.4 134 29.1
Medtr3g091310 Medicago truncatula HOM05D000590 ORTHO05D001713 5.0e-06 57.4 136 30.9
Pp3c13_19810 Physcomitrium patens HOM05D000590 ORTHO05D001713 5.0e-06 57.4 140 29.3
SMO356G0085 Selaginella moellendorffii HOM05D000590 ORTHO05D001713 5.0e-06 57.4 135 27.4
Cpa.g.sc3.73 Carica papaya HOM05D000590 ORTHO05D001713 6.6e-06 57.0 136 30.9
Ca_16699_v3 Cicer arietinum L. HOM05D000590 ORTHO05D001713 6.6e-06 57.0 136 30.9
Glyma.19G066800 Glycine max HOM05D000590 ORTHO05D001713 6.6e-06 57.0 119 30.3
Lalb_Chr23g0271561 Lupinus albus HOM05D000590 ORTHO05D001713 6.6e-06 57.0 136 30.1
Potri.012G013900 Populus trichocarpa HOM05D000590 ORTHO05D001713 6.6e-06 57.0 136 30.9
QL09p009467 Quercus lobata HOM05D000590 ORTHO05D001713 6.6e-06 57.0 136 31.6
RcHm_v2.0_Chr1g0380901 Rosa chinensis HOM05D000590 ORTHO05D001713 6.6e-06 57.0 136 30.9
Thecc.03G197100 Theobroma cacao HOM05D000590 ORTHO05D001713 6.6e-06 57.0 134 28.4
VMungo1383G1591 Vigna mungo HOM05D000590 ORTHO05D001713 6.6e-06 57.0 135 30.4
AT5G53430 Arabidopsis thaliana HOM05D000590 ORTHO05D001713 8.6e-06 56.6 136 30.1
CiPaw.02G040800 Carya illinoinensis HOM05D000590 ORTHO05D001713 8.6e-06 56.6 134 27.6
CiPaw.06G010100 Carya illinoinensis HOM05D000590 ORTHO05D001713 8.6e-06 56.6 139 31.7
AUR62019387 Chenopodium quinoa HOM05D000590 ORTHO05D001713 8.6e-06 56.6 134 28.4
Ca_12809_v3 Cicer arietinum L. HOM05D000590 ORTHO05D001713 8.6e-06 56.6 139 31.7
CsaV3_6G007140 Cucumis sativus L. HOM05D000590 ORTHO05D001713 8.6e-06 56.6 136 30.1
HanXRQChr16g0524131 Helianthus annuus HOM05D000590 ORTHO05D001713 8.6e-06 56.6 135 29.6
Medtr1g008230 Medicago truncatula HOM05D000590 ORTHO05D001713 8.6e-06 56.6 139 31.7
Potri.015G014300 Populus trichocarpa HOM05D000590 ORTHO05D001713 8.6e-06 56.6 136 30.9
Prupe.2G311000 Prunus persica HOM05D000590 ORTHO05D001713 8.6e-06 56.6 136 30.9
Sabra15G0011800 Salix brachista HOM05D000590 ORTHO05D001713 8.6e-06 56.6 136 30.9


User provided reference genes

Program Settings