Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cre04.g221301 Chlamydomonas reinhardtii HOM05D000231 ORTHO05D138565 0.0e+00 1376.7 940 100.0
Cre09.g414416 Chlamydomonas reinhardtii HOM05D000231 ORTHO05D000132 2.8e-15 88.6 137 40.1
Cre11.g467772 Chlamydomonas reinhardtii HOM05D000231 ORTHO05D000132 3.7e-15 88.2 132 38.6
Cre06.g289750 Chlamydomonas reinhardtii HOM05D000552 ORTHO05D000469 1.1e-14 86.7 135 38.5
Cpa.g.sc309.8 Carica papaya HOM05D000231 ORTHO05D000132 2.0e-08 65.9 135 32.6
QL09p017198 Quercus lobata HOM05D000231 ORTHO05D000132 7.4e-08 63.9 122 32.8
TWI12G1399 Tripterygium wilfordii HOM05D000231 ORTHO05D000132 7.4e-08 63.9 124 31.5
Dinv42182 Davidia involucrata HOM05D000231 ORTHO05D000132 9.7e-08 63.5 128 33.6
Cfa013699 Carpinus fangiana HOM05D000231 ORTHO05D000132 1.3e-07 63.2 119 34.5
Duzib093G0734 Durio zibethinus HOM05D000231 ORTHO05D000132 1.7e-07 62.8 149 30.9
Haze_22343 Corylus avellana HOM05D000231 ORTHO05D000132 2.2e-07 62.4 119 34.5
Manes.07G076800 Manihot esculenta HOM05D000231 ORTHO05D000132 2.2e-07 62.4 122 32.8
Duzib187G1498 Durio zibethinus HOM05D000231 ORTHO05D000132 2.8e-07 62.0 122 34.4
Manes.02G146700 Manihot esculenta HOM05D000231 ORTHO05D000132 3.7e-07 61.6 122 30.3
TWI36G0384 Tripterygium wilfordii HOM05D000231 ORTHO05D000132 3.7e-07 61.6 124 29.8
TAR628G1660 Trochodendron aralioides HOM05D000231 ORTHO05D000132 3.7e-07 61.6 125 31.2
Atru.chr13.1046 Acer truncatum HOM05D000231 ORTHO05D000132 4.8e-07 61.2 124 29.8
vmacro04679 Vaccinium macrocarpon HOM05D000231 ORTHO05D000132 4.8e-07 61.2 129 31.0
GSVIVG01003175001 Vitis vinifera HOM05D000231 ORTHO05D000132 4.8e-07 61.2 123 31.7
Dinv15750 Davidia involucrata HOM05D000231 ORTHO05D000132 6.3e-07 60.8 123 34.1
MBI02_g18285_MAGBIO Magnolia biondii HOM05D000231 ORTHO05D000132 6.3e-07 60.8 136 32.4
MBI06_g42717_MAGBIO Magnolia biondii HOM05D000231 ORTHO05D000132 6.3e-07 60.8 129 32.6
Aqoxy5G01328 Aquilegia oxysepala HOM05D000231 ORTHO05D000132 1.4e-06 59.7 126 30.2
BcaC07g41064 Brassica carinata HOM05D000231 ORTHO05D000132 1.4e-06 59.7 121 30.6
BolC8t51630H Brassica oleracea HOM05D000231 ORTHO05D000132 1.4e-06 59.7 122 29.5
Lalb_Chr11g0065101 Lupinus albus HOM05D000231 ORTHO05D000132 1.4e-06 59.7 119 31.9
C08p40640 Brassica napus HOM05D000231 ORTHO05D000132 1.8e-06 59.3 122 29.5
CSS0036673 Camellia sinensis var. sinensis HOM05D000231 ORTHO05D000132 1.8e-06 59.3 122 27.9
Eucgr.F02128 Eucalyptus grandis HOM05D000231 ORTHO05D000132 1.8e-06 59.3 123 31.7
Rhsim06G0074000 Rhododendron simsii HOM05D000231 ORTHO05D000132 1.8e-06 59.3 122 29.5
TAR625G0067 Trochodendron aralioides HOM05D000231 ORTHO05D000132 1.8e-06 59.3 120 31.7
A09p57520 Brassica napus HOM05D000231 ORTHO05D000132 2.4e-06 58.9 122 29.5
BraA09t41143Z Brassica rapa HOM05D000231 ORTHO05D000132 2.4e-06 58.9 122 29.5
Gohir.A11G205900 Gossypium hirsutum HOM05D000231 ORTHO05D000132 2.4e-06 58.9 120 33.3
Gohir.D13G041500 Gossypium hirsutum HOM05D000231 ORTHO05D000132 2.4e-06 58.9 123 32.5
Gorai.013G046400 Gossypium raimondii HOM05D000231 ORTHO05D000132 2.4e-06 58.9 123 32.5
Lalb_Chr08g0242391 Lupinus albus HOM05D000231 ORTHO05D000132 2.4e-06 58.9 119 31.9
Rhsim07G0210100 Rhododendron simsii HOM05D000231 ORTHO05D000132 2.4e-06 58.9 124 31.5
Thecc.08G068100 Theobroma cacao HOM05D000231 ORTHO05D000132 2.4e-06 58.9 129 29.5
TWI56G1287 Tripterygium wilfordii HOM05D000231 ORTHO05D000132 2.4e-06 58.9 124 29.0
GSVIVG01003494001 Vitis vinifera HOM05D000231 ORTHO05D000132 2.4e-06 58.9 120 31.7
Actinidia33108 Actinidia chinensis HOM05D000231 ORTHO05D000132 3.1e-06 58.5 127 29.1
CSS0007207 Camellia sinensis var. sinensis HOM05D000231 ORTHO05D000132 3.1e-06 58.5 123 32.5
CiPaw.07G168000 Carya illinoinensis HOM05D000231 ORTHO05D000132 3.1e-06 58.5 119 32.8
Glyma.02G212400 Glycine max HOM05D000231 ORTHO05D000132 3.1e-06 58.5 124 27.4
Glyma.10G263500 Glycine max HOM05D000231 ORTHO05D000132 3.1e-06 58.5 123 32.5
Hma1.2p1_0796F.1_g219050 Hydrangea macrophylla HOM05D000231 ORTHO05D000132 3.1e-06 58.5 123 31.7
TAR376G1149 Trochodendron aralioides HOM05D000231 ORTHO05D000132 3.1e-06 58.5 124 33.1
Zm00001eb101120 Zea mays HOM05D000231 ORTHO05D000132 3.1e-06 58.5 136 33.1
Zm00001eb315430 Zea mays HOM05D000231 ORTHO05D000132 3.1e-06 58.5 139 32.4
Dinv42636 Davidia involucrata HOM05D000231 ORTHO05D000132 4.1e-06 58.2 113 31.9
Duzib248G0578 Durio zibethinus HOM05D000231 ORTHO05D000132 4.1e-06 58.2 123 31.7
Lalb_Chr23g0270101 Lupinus albus HOM05D000231 ORTHO05D000132 4.1e-06 58.2 125 29.6
Nn1g05509 Nelumbo nucifera HOM05D000231 ORTHO05D000132 5.3e-06 57.8 125 30.4
PSO210G7050 Papaver somniferum HOM05D000231 ORTHO05D000132 5.3e-06 57.8 120 30.0
Peaxi162Scf00003g02442 Petunia axillaris HOM05D000231 ORTHO05D000132 5.3e-06 57.8 123 30.9
Potri.002G103500 Populus trichocarpa HOM05D000231 ORTHO05D000132 5.3e-06 57.8 119 31.1
QL11p034257 Quercus lobata HOM05D000231 ORTHO05D000132 5.3e-06 57.8 123 30.1
TAR381G0488 Trochodendron aralioides HOM05D000231 ORTHO05D000132 5.3e-06 57.8 120 30.8
BcaB08g35075 Brassica carinata HOM05D000231 ORTHO05D000132 6.9e-06 57.4 121 29.8
CAN.G1231.17 Capsicum annuum HOM05D000231 ORTHO05D000132 6.9e-06 57.4 129 32.6
CAN.G1658.5 Capsicum annuum HOM05D000231 ORTHO05D000132 6.9e-06 57.4 115 31.3
Gohir.A06G032632 Gossypium hirsutum HOM05D000231 ORTHO05D000132 6.9e-06 57.4 129 28.7
Gohir.D06G032500 Gossypium hirsutum HOM05D000231 ORTHO05D000132 6.9e-06 57.4 129 28.7
Gorai.010G035800 Gossypium raimondii HOM05D000231 ORTHO05D000132 6.9e-06 57.4 129 28.7
Phvul.007G038400 Phaseolus vulgaris HOM05D000231 ORTHO05D000132 6.9e-06 57.4 129 31.0
Hund27006 Selenicereus undatus HOM05D000231 ORTHO05D000132 6.9e-06 57.4 126 26.2
VMungo0720G1505 Vigna mungo HOM05D000231 ORTHO05D000132 6.9e-06 57.4 123 31.7
Cpa.g.sc200.13 Carica papaya HOM05D000231 ORTHO05D000132 9.1e-06 57.0 124 29.8
Duzib116G0763 Durio zibethinus HOM05D000231 ORTHO05D000132 9.1e-06 57.0 129 28.7
Gohir.D11G208966 Gossypium hirsutum HOM05D000231 ORTHO05D000132 9.1e-06 57.0 135 32.6
Nitab4.5_0003771g0030 Nicotiana tabacum HOM05D000231 ORTHO05D000132 9.1e-06 57.0 129 31.0
PSO170G3029 Papaver somniferum HOM05D000231 ORTHO05D000132 9.1e-06 57.0 120 30.0
RcHm_v2.0_Chr6g0255741 Rosa chinensis HOM05D000231 ORTHO05D000132 9.1e-06 57.0 123 31.7
Thecc.01G092500 Theobroma cacao HOM05D000231 ORTHO05D000132 9.1e-06 57.0 122 32.8
vmacro18570 Vaccinium macrocarpon HOM05D000231 ORTHO05D000132 9.1e-06 57.0 116 31.9
HPP92_016369 Vanilla planifolia HOM05D000231 ORTHO05D000132 9.1e-06 57.0 129 29.5


User provided reference genes

Program Settings