Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cre04.g219787 Chlamydomonas reinhardtii HOM05D006342 ORTHO05D008155 6.4e-220 767.3 446 100.0
PRCOL_00002739 Prasinoderma coloniale HOM05D006342 ORTHO05D008155 2.0e-59 234.2 344 45.6
MELO3C018621.2 Cucumis melo HOM05D006342 ORTHO05D008155 3.4e-51 206.8 343 39.7
CsaV3_7G006740 Cucumis sativus L. HOM05D006342 ORTHO05D008155 3.4e-51 206.8 343 39.7
Pp3c15_22700 Physcomitrium patens HOM05D006342 ORTHO05D008155 1.3e-50 204.9 392 39.8
Cc02_g21250 Coffea canephora HOM05D006342 ORTHO05D008155 3.7e-50 203.4 359 39.0
Manes.07G034700 Manihot esculenta HOM05D006342 ORTHO05D008155 8.3e-50 202.2 347 41.2
Actinidia24004 Actinidia chinensis HOM05D006342 ORTHO05D008155 1.8e-49 201.1 346 40.2
HanXRQChr10g0303621 Helianthus annuus HOM05D006342 ORTHO05D008155 2.4e-49 200.7 367 38.4
Mapoly0112s0045 Marchantia polymorpha HOM05D006342 ORTHO05D008155 3.1e-49 200.3 383 39.7
Atru.chr6.1184 Acer truncatum HOM05D006342 ORTHO05D008155 4.1e-49 199.9 341 40.2
TAR628G1271 Trochodendron aralioides HOM05D006342 ORTHO05D008155 4.1e-49 199.9 352 39.8
Lj9A350G66 Lonicera japonica HOM05D006342 ORTHO05D008155 7.0e-49 199.1 348 39.9
CANSAT21G1086 Cannabis sativa HOM05D006342 ORTHO05D008155 9.1e-49 198.7 346 39.0
DCAR_003711 Daucus carota HOM05D006342 ORTHO05D008155 1.2e-48 198.4 370 38.9
Peaxi162Scf01060g00128 Petunia axillaris HOM05D006342 ORTHO05D008155 1.2e-48 198.4 344 39.0
QL11p022820 Quercus lobata HOM05D006342 ORTHO05D008155 1.6e-48 198.0 351 38.5
Ciclev10028615m.g Citrus clementina HOM05D006342 ORTHO05D008155 2.0e-48 197.6 343 39.1
Sabra17G0037300 Salix brachista HOM05D006342 ORTHO05D008155 2.0e-48 197.6 351 40.2
Rhsim11G0137800 Rhododendron simsii HOM05D006342 ORTHO05D008155 2.7e-48 197.2 341 39.6
RhsimUnG0187900 Rhododendron simsii HOM05D006342 ORTHO05D008155 2.7e-48 197.2 341 39.9
Lsat_1_v5_gn_5_108680 Lactuca sativa HOM05D006342 ORTHO05D008155 4.5e-48 196.4 377 38.2
Lj4g0023834 Lotus japonicus HOM05D006342 ORTHO05D008155 4.5e-48 196.4 353 39.4
Thecc.02G134500 Theobroma cacao HOM05D006342 ORTHO05D008155 5.9e-48 196.1 352 39.5
MSTRG.16600 Avicennia marina HOM05D006342 ORTHO05D008155 7.7e-48 195.7 349 39.8
RcHm_v2.0_Chr2g0143381 Rosa chinensis HOM05D006342 ORTHO05D008155 7.7e-48 195.7 346 41.3
Carub.0002s0473 Capsella rubella HOM05D006342 ORTHO05D008155 1.3e-47 194.9 349 40.1
Prupe.8G064500 Prunus persica HOM05D006342 ORTHO05D008155 1.3e-47 194.9 349 39.5
Gohir.D02G198600 Gossypium hirsutum HOM05D006342 ORTHO05D008155 1.7e-47 194.5 351 39.0
Duzib052G0010 Durio zibethinus HOM05D006342 ORTHO05D008155 2.3e-47 194.1 354 39.3
Gorai.005G222500 Gossypium raimondii HOM05D006342 ORTHO05D008155 2.3e-47 194.1 351 39.3
TWI23G0792 Tripterygium wilfordii HOM05D006342 ORTHO05D008155 2.9e-47 193.7 352 38.9
AL2G16000 Arabidopsis lyrata HOM05D006342 ORTHO05D008155 6.6e-47 192.6 349 40.4
FvH4_6g33511 Fragaria vesca HOM05D006342 ORTHO05D008155 6.6e-47 192.6 346 39.9
Potri.017G050900 Populus trichocarpa HOM05D006342 ORTHO05D008155 6.6e-47 192.6 349 39.3
ECA234G3624 Erigeron canadensis HOM05D006342 ORTHO05D008155 8.6e-47 192.2 348 38.8
Hma1.2p1_0522F.1_g171800 Hydrangea macrophylla HOM05D006342 ORTHO05D008155 8.6e-47 192.2 370 37.6
Oeu042410.2 Olea europaea HOM05D006342 ORTHO05D008155 1.1e-46 191.8 346 38.4
Aa31LG2G9860 Aethionema arabicum HOM05D006342 ORTHO05D008155 1.9e-46 191.0 349 40.1
Gohir.A03G175100 Gossypium hirsutum HOM05D006342 ORTHO05D008155 1.9e-46 191.0 351 38.2
SMO364G0259 Selaginella moellendorffii HOM05D006342 ORTHO05D008155 1.9e-46 191.0 330 40.6
GSVIVG01015772001 Vitis vinifera HOM05D006342 ORTHO05D008155 1.9e-46 191.0 351 37.9
CAN.G523.45 Capsicum annuum HOM05D006342 ORTHO05D008155 2.5e-46 190.7 344 37.5
Nitab4.5_0000863g0140 Nicotiana tabacum HOM05D006342 ORTHO05D008155 5.5e-46 189.5 344 37.2
SalBow5G5605 Salvia bowleyana HOM05D006342 ORTHO05D008155 5.5e-46 189.5 354 39.3
PGSC0003DMG400012575 Solanum tuberosum HOM05D006342 ORTHO05D008155 7.2e-46 189.1 344 37.8
Migut.B00584 Erythranthe guttata HOM05D006342 ORTHO05D008155 9.5e-46 188.7 349 39.5
EL10Ac9g21517 Beta vulgaris HOM05D006342 ORTHO05D008155 1.2e-45 188.3 339 38.9
BolC1t03681H Brassica oleracea HOM05D006342 ORTHO05D008155 1.2e-45 188.3 349 39.5
Sopen01g047960 Solanum pennellii HOM05D006342 ORTHO05D008155 1.2e-45 188.3 344 37.5
Psat7g100320 Pisum sativum HOM05D006342 ORTHO05D008155 1.6e-45 188.0 341 39.3
unitig_0.g609 Utricularia gibba HOM05D006342 ORTHO05D008190 1.6e-45 188.0 362 40.1
BcaB04g20275 Brassica carinata HOM05D006342 ORTHO05D008155 2.1e-45 187.6 346 39.6
Nitab4.5_0003959g0010 Nicotiana tabacum HOM05D006342 ORTHO05D008155 2.1e-45 187.6 344 37.2
BraA01t03071Z Brassica rapa HOM05D006342 ORTHO05D008155 2.8e-45 187.2 349 39.0
AUR62013159 Chenopodium quinoa HOM05D006342 ORTHO05D008155 2.8e-45 187.2 339 38.6
AT1G60600 Arabidopsis thaliana HOM05D006342 ORTHO05D008155 3.6e-45 186.8 349 39.5
A01p29370 Brassica napus HOM05D006342 ORTHO05D008155 6.1e-45 186.0 349 39.0
Eucgr.G00932 Eucalyptus grandis HOM05D006342 ORTHO05D008155 6.1e-45 186.0 339 39.2
FAN02G0548 Fragaria x ananassa HOM05D006342 ORTHO05D008155 6.1e-45 186.0 380 37.4
BcaC09g49390 Brassica carinata HOM05D006342 ORTHO05D008155 8.0e-45 185.7 349 39.5
C01p37160 Brassica napus HOM05D006342 ORTHO05D008155 8.0e-45 185.7 349 39.5
CSS0025541 Camellia sinensis var. sinensis HOM05D006342 ORTHO05D008155 8.0e-45 185.7 343 38.5
AUR62010160 Chenopodium quinoa HOM05D006342 ORTHO05D008155 8.0e-45 185.7 339 38.3
Thhalv10023528m.g Eutrema salsugineum HOM05D006342 ORTHO05D008155 8.0e-45 185.7 349 38.7
Dinv24174 Davidia involucrata HOM05D006342 ORTHO05D008155 1.4e-44 184.9 341 37.2
Medtr4g094100 Medicago truncatula HOM05D006342 ORTHO05D008155 1.4e-44 184.9 370 38.4
Cpa.g.sc42.26 Carica papaya HOM05D006342 ORTHO05D008155 2.3e-44 184.1 326 39.9
PSO447G0017 Papaver somniferum HOM05D006342 ORTHO05D008155 2.3e-44 184.1 340 37.4
ClCG09G015650 Citrullus lanatus HOM05D006342 ORTHO05D008155 4.0e-44 183.3 343 37.6
Nn5g30026 Nelumbo nucifera HOM05D006342 ORTHO05D008155 4.0e-44 183.3 366 37.4
arahy.Tifrunner.gnm1.ann1.U7PRNJ Arachis hypogaea HOM05D006342 ORTHO05D008155 5.2e-44 183.0 354 38.4
PGR042G1699 Punica granatum HOM05D006342 ORTHO05D008155 5.2e-44 183.0 387 36.4
COL.COLO4_32304 Corchorus olitorius HOM05D006342 ORTHO05D008155 6.8e-44 182.6 324 39.8
CiPaw.05G033400 Carya illinoinensis HOM05D006342 ORTHO05D008155 1.2e-43 181.8 341 38.4
Os03g0190100 Oryza sativa ssp. japonica HOM05D006342 ORTHO05D008155 2.6e-43 180.6 371 37.5
SGA_v2.0_scaffold83G26327 Striga asiatica HOM05D006342 ORTHO05D008155 2.6e-43 180.6 350 37.7
Sabra17G0037900 Salix brachista HOM05D006342 ORTHO05D008155 1.3e-42 178.3 351 39.3
TPR.G35344 Trifolium pratense HOM05D006342 ORTHO05D008155 1.3e-42 178.3 365 37.5
Lalb_Chr05g0217591 Lupinus albus HOM05D006342 ORTHO05D008155 1.7e-42 177.9 368 38.3
VMungo0251G1514 Vigna mungo HOM05D006342 ORTHO05D008155 1.7e-42 177.9 348 37.4
Ca_18366_v3 Cicer arietinum L. HOM05D003001 ORTHO05D003494 2.9e-42 177.2 345 37.4
Glyma.13G042800 Glycine max HOM05D006342 ORTHO05D008155 2.9e-42 177.2 349 37.0
Glyma.08G070600 Glycine max HOM05D006342 ORTHO05D008155 1.4e-41 174.9 364 36.5
Sabra17G0042600 Salix brachista HOM05D006342 ORTHO05D008155 1.8e-41 174.5 351 38.7
MSTRG.20291 Avicennia marina HOM05D006342 ORTHO05D008155 2.4e-41 174.1 346 37.6
Sc15g0003050 Simmondsia chinensis HOM05D006342 ORTHO05D008155 3.2e-41 173.7 339 36.3
Migut.B01155 Erythranthe guttata HOM05D006342 ORTHO05D008155 5.4e-41 172.9 348 36.2
Hund06370 Selenicereus undatus HOM05D006342 ORTHO05D008155 7.0e-41 172.6 309 40.1
MBI05_g05612_MAGBIO Magnolia biondii HOM05D006342 ORTHO05D008155 1.2e-40 171.8 337 38.3
MD10G1052500 Malus domestica HOM05D006342 ORTHO05D008155 1.2e-40 171.8 349 37.2
arahy.Tifrunner.gnm1.ann1.XZGJ82 Arachis hypogaea HOM05D006342 ORTHO05D008155 1.6e-40 171.4 341 38.7
Zm00001eb006830 Zea mays HOM05D006342 ORTHO05D008155 3.3e-38 163.7 386 36.8
Solyc01g105460.4 Solanum lycopersicum HOM05D006342 ORTHO05D008155 5.6e-38 162.9 309 36.9
AagrBONN_evm.TU.Sc2ySwM_117.3744 Anthoceros agrestis HOM05D006342 ORTHO05D008155 7.3e-38 162.5 339 37.2
THA.LOC104799883 Tarenaya hassleriana HOM05D006342 ORTHO05D008155 7.3e-38 162.5 323 36.8
AagrBONN_evm.TU.Sc2ySwM_228.424 Anthoceros agrestis HOM05D006342 ORTHO05D008155 2.1e-37 161.0 376 36.4
PSO210G1371 Papaver somniferum HOM05D006342 ORTHO05D008155 1.0e-36 158.7 273 39.6
HPP92_019303 Vanilla planifolia HOM05D006342 ORTHO05D008155 1.4e-36 158.3 399 35.8
Migut.B01157 Erythranthe guttata HOM05D006342 ORTHO05D008155 2.3e-36 157.5 317 36.0
Sed0004067 Sechium edule HOM05D006342 ORTHO05D008155 1.5e-35 154.8 250 40.8
FAN09G1871 Fragaria x ananassa HOM05D006342 ORTHO05D003187 1.7e-34 151.4 380 33.7
CBR_g45392 Chara braunii HOM05D006342 ORTHO05D008155 1.9e-33 147.9 321 38.6
Oeu000253.3 Olea europaea HOM05D006342 ORTHO05D008155 1.9e-33 147.9 342 34.2
Hma1.2p1_0522F.1_g171810 Hydrangea macrophylla HOM05D006342 ORTHO05D008155 3.2e-33 147.1 231 39.8
Phvul.002G210750 Phaseolus vulgaris HOM05D006342 ORTHO05D008155 5.4e-33 146.4 261 40.2
SpUN0430_0010 Schrenkiella parvula HOM05D006342 ORTHO05D008155 1.5e-30 138.3 272 38.2
vmacro01839 Vaccinium macrocarpon HOM05D006342 ORTHO05D008155 1.9e-30 137.9 352 34.4
Ah.01g010100 Amaranthus hybridus HOM05D006342 ORTHO05D008155 8.9e-28 129.0 265 36.2
QL11p022738 Quercus lobata HOM05D006342 ORTHO05D008155 4.9e-26 123.2 283 36.0
SEGI_15165 Sequoiadendron giganteum HOM05D006342 ORTHO05D008155 8.6e-23 112.5 214 36.0
FAN14G1047 Fragaria x ananassa HOM05D000343 ORTHO05D003187 2.2e-18 97.8 346 28.0
Haze_10585 Corylus avellana HOM05D006342 ORTHO05D008155 4.1e-17 93.6 337 28.2
Aqoxy5G01924 Aquilegia oxysepala HOM05D006342 ORTHO05D008155 4.7e-13 80.1 128 39.1
Glyma.10G123801 Glycine max HOM05D006342 ORTHO05D008155 2.1e-08 64.7 92 40.2
Glyma.16G064700 Glycine max HOM05D006342 ORTHO05D008155 2.1e-08 64.7 92 40.2
SEGI_15059 Sequoiadendron giganteum HOM05D006342 ORTHO05D008155 1.0e-07 62.4 115 40.9
ATR0918G004 Amborella trichopoda HOM05D006342 ORTHO05D008155 2.3e-07 61.2 106 34.9


User provided reference genes

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