Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cre04.g217903 Chlamydomonas reinhardtii HOM05D006942 ORTHO05D008737 2.1e-134 482.6 301 100.0
BcaC04g22009 Brassica carinata HOM05D006942 ORTHO05D008737 5.6e-34 149.1 176 44.9
A09p19530 Brassica napus HOM05D006942 ORTHO05D008737 5.6e-34 149.1 176 44.9
C09p24900 Brassica napus HOM05D006942 ORTHO05D008737 5.6e-34 149.1 176 44.9
BolC9t55381H Brassica oleracea HOM05D006942 ORTHO05D008737 5.6e-34 149.1 176 44.9
Carub.0002s0962 Capsella rubella HOM05D006942 ORTHO05D008737 9.6e-34 148.3 176 44.9
Thhalv10008350m.g Eutrema salsugineum HOM05D006942 ORTHO05D008737 9.6e-34 148.3 178 43.8
BcaB07g31088 Brassica carinata HOM05D006942 ORTHO05D008737 1.2e-33 147.9 176 44.9
MD12G1002500 Malus domestica HOM05D006942 ORTHO05D008737 1.2e-33 147.9 176 43.2
CARHR028870 Cardamine hirsuta HOM05D006942 ORTHO05D008737 1.6e-33 147.5 175 43.4
Lj1g0019871 Lotus japonicus HOM05D006942 ORTHO05D008737 1.6e-33 147.5 177 45.2
AL1G64670 Arabidopsis lyrata HOM05D006942 ORTHO05D008737 2.1e-33 147.1 176 44.3
AT2G23840 Arabidopsis thaliana HOM05D006942 ORTHO05D008737 2.1e-33 147.1 176 44.3
SpUn0001_1050 Schrenkiella parvula HOM05D006942 ORTHO05D008737 2.1e-33 147.1 176 44.3
ATR0697G165 Amborella trichopoda HOM05D006942 ORTHO05D008737 2.8e-33 146.7 198 41.9
DCAR_009675 Daucus carota HOM05D006942 ORTHO05D008737 2.8e-33 146.7 177 42.4
Sed0013150 Sechium edule HOM05D006942 ORTHO05D008737 2.8e-33 146.7 176 42.0
Nn2g15884 Nelumbo nucifera HOM05D002140 ORTHO05D008737 3.6e-33 146.4 176 44.9
ClCG10G013230 Citrullus lanatus HOM05D006942 ORTHO05D008737 4.7e-33 146.0 176 42.0
Duzib177G1195 Durio zibethinus HOM05D006942 ORTHO05D008737 6.2e-33 145.6 180 41.7
COL.COLO4_13617 Corchorus olitorius HOM05D006942 ORTHO05D008737 8.1e-33 145.2 182 41.8
MELO3C026901.2 Cucumis melo HOM05D006942 ORTHO05D008737 8.1e-33 145.2 176 41.5
CsaV3_3G043400 Cucumis sativus L. HOM05D006942 ORTHO05D008737 8.1e-33 145.2 176 41.5
DCAR_019882 Daucus carota HOM05D006942 ORTHO05D008737 8.1e-33 145.2 176 42.6
PSO339G1210 Papaver somniferum HOM05D006942 ORTHO05D008737 8.1e-33 145.2 177 42.9
Nn7g35832 Nelumbo nucifera HOM05D006942 ORTHO05D008737 1.1e-32 144.8 176 44.3
Gohir.D13G109500 Gossypium hirsutum HOM05D006942 ORTHO05D008737 1.4e-32 144.4 177 41.8
Gorai.013G123100 Gossypium raimondii HOM05D006942 ORTHO05D008737 1.4e-32 144.4 177 41.8
Manes.08G149200 Manihot esculenta HOM05D006942 ORTHO05D008737 1.4e-32 144.4 207 39.6
FAN21G2944 Fragaria x ananassa HOM05D006942 ORTHO05D008737 1.8e-32 144.1 176 43.2
Sed0025081 Sechium edule HOM05D006942 ORTHO05D008737 1.8e-32 144.1 176 42.0
Phvul.001G109600 Phaseolus vulgaris HOM05D006942 ORTHO05D008737 2.4e-32 143.7 177 44.1
Rhsim04G0087000 Rhododendron simsii HOM05D006942 ORTHO05D008737 2.4e-32 143.7 182 41.2
VMungo1383G0897 Vigna mungo HOM05D006942 ORTHO05D008737 2.4e-32 143.7 177 44.1
Gohir.A13G105500 Gossypium hirsutum HOM05D006942 ORTHO05D008737 3.1e-32 143.3 177 42.4
Thecc.05G293100 Theobroma cacao HOM05D006942 ORTHO05D008737 3.1e-32 143.3 180 41.1
vmacro09146 Vaccinium macrocarpon HOM05D006942 ORTHO05D008737 3.1e-32 143.3 176 42.0
FvH4_3g25250 Fragaria vesca HOM05D006942 ORTHO05D008737 4.0e-32 142.9 176 43.2
FAN16G3006 Fragaria x ananassa HOM05D006942 ORTHO05D008737 4.0e-32 142.9 176 43.2
MBI11_g05460_MAGBIO Magnolia biondii HOM05D006942 ORTHO05D008737 4.0e-32 142.9 176 43.2
Aqoxy2G00557 Aquilegia oxysepala HOM05D006942 ORTHO05D008737 6.9e-32 142.1 175 44.0
SGA_v2.0_scaffold50G18512 Striga asiatica HOM05D006942 ORTHO05D008737 6.9e-32 142.1 176 40.3
TWI34G0045 Tripterygium wilfordii HOM05D006942 ORTHO05D008737 6.9e-32 142.1 176 40.9
Glyma.16G042200 Glycine max HOM05D006942 ORTHO05D008737 9.0e-32 141.7 177 43.5
RcHm_v2.0_Chr5g0046891 Rosa chinensis HOM05D006942 ORTHO05D008737 9.0e-32 141.7 176 42.0
Eucgr.A02087 Eucalyptus grandis HOM05D006942 ORTHO05D008737 1.2e-31 141.4 175 42.3
THA.LOC104823787 Tarenaya hassleriana HOM05D006942 ORTHO05D008737 1.2e-31 141.4 176 41.5
Glyma.19G110300 Glycine max HOM05D006942 ORTHO05D008737 1.5e-31 141.0 177 43.5
arahy.Tifrunner.gnm1.ann1.0W916P Arachis hypogaea HOM05D006942 ORTHO05D008737 2.0e-31 140.6 177 41.8
CDE06G2457 Ceratophyllum demersum HOM05D006942 ORTHO05D008737 2.0e-31 140.6 177 42.4
Potri.013G059500 Populus trichocarpa HOM05D006942 ORTHO05D008737 2.0e-31 140.6 176 41.5
GSVIVG01033386001 Vitis vinifera HOM05D006942 ORTHO05D008737 3.4e-31 139.8 176 41.5
Aa31LG2G1990 Aethionema arabicum HOM05D006942 ORTHO05D008737 4.4e-31 139.4 167 44.3
Ciclev10021582m.g Citrus clementina HOM05D006942 ORTHO05D008737 4.4e-31 139.4 175 42.3
Cc00_g08890 Coffea canephora HOM05D006942 ORTHO05D008737 4.4e-31 139.4 176 42.6
CDE10G0368 Ceratophyllum demersum HOM05D006942 ORTHO05D008737 5.8e-31 139.0 176 40.9
MSTRG.19939 Avicennia marina HOM05D006942 ORTHO05D008737 7.6e-31 138.7 176 39.8
Gorai.007G287900 Gossypium raimondii HOM05D006942 ORTHO05D008737 7.6e-31 138.7 176 41.5
Eucgr.K01480 Eucalyptus grandis HOM05D006942 ORTHO05D008737 9.9e-31 138.3 175 41.7
Atru.chr2.1323 Acer truncatum HOM05D006942 ORTHO05D008737 1.3e-30 137.9 176 40.9
PGR042G3330 Punica granatum HOM05D006942 ORTHO05D008737 1.7e-30 137.5 176 39.8
Lalb_Chr24g0403081 Lupinus albus HOM05D006942 ORTHO05D008737 2.2e-30 137.1 175 40.6
Medtr7g085420 Medicago truncatula HOM05D006942 ORTHO05D008737 2.2e-30 137.1 179 41.9
QL07p020181 Quercus lobata HOM05D006942 ORTHO05D008737 2.2e-30 137.1 176 40.3
Mapoly0043s0076 Marchantia polymorpha HOM05D006942 ORTHO05D008737 3.8e-30 136.3 143 46.9
AagrBONN_evm.TU.Sc2ySwM_344.2088 Anthoceros agrestis HOM05D006942 ORTHO05D008737 6.4e-30 135.6 175 42.3
Psat3g089160 Pisum sativum HOM05D006942 ORTHO05D008737 6.4e-30 135.6 179 40.2
TAR633G0669 Trochodendron aralioides HOM05D006942 ORTHO05D008737 8.4e-30 135.2 176 39.2
CANSAT78G1082 Cannabis sativa HOM05D006942 ORTHO05D008737 1.1e-29 134.8 172 41.3
Migut.J01895 Erythranthe guttata HOM05D006942 ORTHO05D008737 1.4e-29 134.4 198 38.4
ECA233G4155 Erigeron canadensis HOM05D006942 ORTHO05D008737 3.2e-29 133.3 177 40.7
TPR.G5873 Trifolium pratense HOM05D006942 ORTHO05D008737 3.2e-29 133.3 181 40.9
SMO364G0530 Selaginella moellendorffii HOM05D006942 ORTHO05D008737 4.2e-29 132.9 143 48.3
HanXRQChr13g0398101 Helianthus annuus HOM05D006942 ORTHO05D008737 7.1e-29 132.1 175 40.6
Lsat_1_v5_gn_6_36781 Lactuca sativa HOM05D006942 ORTHO05D008737 1.2e-28 131.3 148 43.2
Cpa.g.sc51.94 Carica papaya HOM05D006942 ORTHO05D008737 1.6e-28 131.0 183 39.3
Pp3c12_13900 Physcomitrium patens HOM05D006942 ORTHO05D008737 2.7e-28 130.2 176 42.6
Pp3c4_7620 Physcomitrium patens HOM05D006942 ORTHO05D008737 2.7e-28 130.2 176 42.0
HPP92_018642 Vanilla planifolia HOM05D006942 ORTHO05D008737 3.5e-28 129.8 175 39.4
Os07g0170200 Oryza sativa ssp. japonica HOM05D006942 ORTHO05D008737 7.8e-28 128.6 165 41.8
Peaxi162Scf00076g01036 Petunia axillaris HOM05D006942 ORTHO05D008737 1.0e-27 128.3 193 37.3
Sabra19G0041400 Salix brachista HOM05D006942 ORTHO05D008737 1.7e-27 127.5 176 39.2
PRCOL_00006758 Prasinoderma coloniale HOM05D006942 ORTHO05D008737 5.1e-27 125.9 146 44.5
TAR623G0107 Trochodendron aralioides HOM05D002140 ORTHO05D002382 5.1e-27 125.9 166 40.4
Sc13g0007650 Simmondsia chinensis HOM05D006942 ORTHO05D008737 5.6e-26 122.5 141 43.3
Haze_19409 Corylus avellana HOM05D006942 ORTHO05D008737 9.6e-26 121.7 218 35.8
AUR62032674 Chenopodium quinoa HOM05D006942 ORTHO05D008737 2.1e-25 120.6 172 37.8
Lalb_Chr06g0173931 Lupinus albus HOM05D006942 ORTHO05D008737 4.0e-24 116.3 216 32.9
Lj2A357G77 Lonicera japonica HOM05D006942 ORTHO05D008737 1.2e-23 114.8 149 40.9
PGR142G1268 Punica granatum HOM05D006942 ORTHO05D008737 4.5e-23 112.8 181 37.0
Sabra13G0052800 Salix brachista HOM05D006942 ORTHO05D008737 4.5e-23 112.8 149 40.3
Prupe.7G002400 Prunus persica HOM05D006942 ORTHO05D008737 7.6e-23 112.1 147 41.5
Ca_08258_v3 Cicer arietinum L. HOM05D006942 ORTHO05D008737 9.9e-23 111.7 152 42.1
EL10Ac3g06808 Beta vulgaris HOM05D006942 ORTHO05D008737 1.3e-22 111.3 222 31.5
Manes.09G142700 Manihot esculenta HOM05D006942 ORTHO05D008737 1.3e-22 111.3 115 47.0
CBR_g603 Chara braunii HOM05D006942 ORTHO05D008737 2.2e-22 110.5 184 37.0
CiPaw.09G001300 Carya illinoinensis HOM05D006942 ORTHO05D008737 2.9e-22 110.2 149 38.9
Gohir.D11G268200 Gossypium hirsutum HOM05D006942 ORTHO05D008737 4.2e-21 106.3 176 35.8
Actinidia38618 Actinidia chinensis HOM05D006942 ORTHO05D008737 4.6e-20 102.8 174 33.9
Nitab4.5_0000911g0030 Nicotiana tabacum HOM05D006942 ORTHO05D008737 1.8e-19 100.9 113 45.1
CSS0046453 Camellia sinensis var. sinensis HOM05D006942 ORTHO05D008737 5.6e-18 95.9 175 34.3
unitig_85.g27430 Utricularia gibba HOM05D006942 ORTHO05D008737 3.7e-17 93.2 117 43.6
Duzib128G0620 Durio zibethinus HOM05D006942 ORTHO05D008737 4.8e-17 92.8 142 34.5
AUR62032073 Chenopodium quinoa HOM05D006942 ORTHO05D008737 3.1e-16 90.1 107 41.1
Potri.019G033200 Populus trichocarpa HOM05D006942 ORTHO05D008737 9.3e-13 78.6 91 42.9
SalBow2G1960 Salvia bowleyana HOM05D006942 ORTHO05D008737 2.1e-12 77.4 93 40.9
Hund24842 Selenicereus undatus HOM05D006942 ORTHO05D008737 3.5e-12 76.6 104 37.5
Actinidia17307 Actinidia chinensis HOM05D006942 ORTHO05D008737 1.8e-11 74.3 91 38.5
arahy.Tifrunner.gnm1.ann1.T4HPZA Arachis hypogaea HOM05D006942 ORTHO05D008737 2.1e-09 67.4 177 29.9
Gohir.A11G258200 Gossypium hirsutum HOM05D006942 ORTHO05D008737 2.1e-09 67.4 91 38.5
Ah.04g153240 Amaranthus hybridus HOM05D000653 ORTHO05D003117 1.4e-08 64.7 86 39.5
Pp3s30_1160 Physcomitrium patens HOM05D006942 ORTHO05D317230 2.2e-06 57.4 80 37.5
Oeu048436.1 Olea europaea HOM05D006942 ORTHO05D008737 6.5e-06 55.8 81 35.8


User provided reference genes

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