Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cre03.g206950 Chlamydomonas reinhardtii HOM05D002350 ORTHO05D000091 0.0e+00 3017.6 1723 100.0
Nitab4.5_0001354g0020 Nicotiana tabacum HOM05D002350 ORTHO05D000091 1.1e-09 70.9 220 29.5
Solyc06g051190.3 Solanum lycopersicum HOM05D002350 ORTHO05D000091 1.1e-09 70.9 233 28.3
Cc06_g10360 Coffea canephora HOM05D002350 ORTHO05D000091 1.5e-09 70.5 221 29.0
Eucgr.C03764 Eucalyptus grandis HOM05D002350 ORTHO05D000091 1.9e-09 70.1 240 27.5
Nitab4.5_0000165g0030 Nicotiana tabacum HOM05D002350 ORTHO05D000091 3.2e-09 69.3 220 29.5
MBI04_g40931_MAGBIO Magnolia biondii HOM05D002350 ORTHO05D000091 2.1e-08 66.6 260 24.6
Sabra06G0136400 Salix brachista HOM05D002350 ORTHO05D000091 2.1e-08 66.6 223 28.3
Manes.16G110000 Manihot esculenta HOM05D002350 ORTHO05D000091 2.7e-08 66.2 240 27.9
Lj4C392G1 Lonicera japonica HOM05D002350 ORTHO05D000091 3.6e-08 65.9 260 25.8
RcHm_v2.0_Chr2g0091731 Rosa chinensis HOM05D002350 ORTHO05D000091 3.6e-08 65.9 222 27.5
arahy.Tifrunner.gnm1.ann1.HAD3B9 Arachis hypogaea HOM05D002350 ORTHO05D000091 4.7e-08 65.5 220 27.3
AUR62021425 Chenopodium quinoa HOM05D002350 ORTHO05D000091 4.7e-08 65.5 219 26.0
Potri.006G164400 Populus trichocarpa HOM05D002350 ORTHO05D000091 4.7e-08 65.5 223 27.8
Potri.007G081300 Populus trichocarpa HOM05D002350 ORTHO05D000091 6.1e-08 65.1 247 26.3
Gorai.001G008800 Gossypium raimondii HOM05D002350 ORTHO05D000091 1.0e-07 64.3 231 26.4
CiPaw.03G226000 Carya illinoinensis HOM05D002350 ORTHO05D000091 1.4e-07 63.9 224 26.3
Cc06_g10350 Coffea canephora HOM05D002350 ORTHO05D000091 1.4e-07 63.9 261 26.1
Duzib168G1106 Durio zibethinus HOM05D002350 ORTHO05D000091 1.4e-07 63.9 221 26.7
Eucgr.K00104 Eucalyptus grandis HOM05D002350 ORTHO05D000091 1.4e-07 63.9 222 27.0
arahy.Tifrunner.gnm1.ann1.7X0VYH Arachis hypogaea HOM05D002350 ORTHO05D000091 1.8e-07 63.5 220 26.8
Gohir.A07G008300 Gossypium hirsutum HOM05D002350 ORTHO05D000091 1.8e-07 63.5 231 26.8
arahy.Tifrunner.gnm1.ann1.9LQV7C Arachis hypogaea HOM05D002350 ORTHO05D000091 2.3e-07 63.2 220 26.8
RcHm_v2.0_Chr5g0014401 Rosa chinensis HOM05D002350 ORTHO05D000091 2.3e-07 63.2 224 25.9
AUR62010902 Chenopodium quinoa HOM05D002350 ORTHO05D000091 3.0e-07 62.8 224 24.6
Ciclev10007331m.g Citrus clementina HOM05D002350 ORTHO05D000091 3.0e-07 62.8 225 27.6
Ah.14g083290 Amaranthus hybridus HOM05D002350 ORTHO05D000091 4.0e-07 62.4 221 25.3
Gohir.D07G008700 Gossypium hirsutum HOM05D002350 ORTHO05D000091 4.0e-07 62.4 231 26.4
PGR102G2642 Punica granatum HOM05D002350 ORTHO05D000091 4.0e-07 62.4 253 25.3
Hund26256 Selenicereus undatus HOM05D002350 ORTHO05D000091 4.0e-07 62.4 227 26.0
Duzib168G2169 Durio zibethinus HOM05D002350 ORTHO05D000091 5.2e-07 62.0 229 26.2
AUR62021426 Chenopodium quinoa HOM05D002350 ORTHO05D000091 6.7e-07 61.6 219 25.6
SGA_v2.0_scaffold501G52502 Striga asiatica HOM05D002350 ORTHO05D000091 1.2e-06 60.8 220 26.4
Prupe.7G221200 Prunus persica HOM05D002350 ORTHO05D000091 1.5e-06 60.5 226 25.7
Atru.chr7.1447 Acer truncatum HOM05D002350 ORTHO05D000091 2.0e-06 60.1 222 27.0
AL3G48310 Arabidopsis lyrata HOM05D002350 ORTHO05D000091 2.0e-06 60.1 223 26.9
ECA236G2339 Erigeron canadensis HOM05D002350 ORTHO05D000091 2.0e-06 60.1 230 26.1
QL02p042039 Quercus lobata HOM05D002350 ORTHO05D000091 2.0e-06 60.1 212 26.9
Rhsim03G0237500 Rhododendron simsii HOM05D002350 ORTHO05D000091 2.0e-06 60.1 242 24.4
Sc08g0007950 Simmondsia chinensis HOM05D002350 ORTHO05D000091 2.0e-06 60.1 256 26.2
C07p01790 Brassica napus HOM05D002350 ORTHO05D000091 2.6e-06 59.7 250 26.0
COL.COLO4_34763 Corchorus olitorius HOM05D002350 ORTHO05D000091 2.6e-06 59.7 213 28.6
Lj7C663T4 Lonicera japonica HOM05D002350 ORTHO05D000091 2.6e-06 59.7 226 28.3
MD15G1195400 Malus domestica HOM05D002350 ORTHO05D000091 2.6e-06 59.7 258 25.2
Rhsim03G0238400 Rhododendron simsii HOM05D002350 ORTHO05D000091 2.6e-06 59.7 253 25.3
vmacro06244 Vaccinium macrocarpon HOM05D002350 ORTHO05D000091 2.6e-06 59.7 251 25.1
ClCG03G016200 Citrullus lanatus HOM05D002350 ORTHO05D000091 3.3e-06 59.3 225 28.0
Thecc.09G101800 Theobroma cacao HOM05D002350 ORTHO05D000091 3.3e-06 59.3 233 24.5
arahy.Tifrunner.gnm1.ann1.2RFB5Y Arachis hypogaea HOM05D002350 ORTHO05D000091 4.4e-06 58.9 220 25.9
CSS0048603 Camellia sinensis var. sinensis HOM05D002350 ORTHO05D000091 4.4e-06 58.9 223 25.6
ECA234G0874 Erigeron canadensis HOM05D002350 ORTHO05D000091 4.4e-06 58.9 255 24.7
Nn8g39091 Nelumbo nucifera HOM05D002350 ORTHO05D000091 4.4e-06 58.9 228 25.0
RcHm_v2.0_Chr2g0091681 Rosa chinensis HOM05D002350 ORTHO05D000091 4.4e-06 58.9 228 25.9
EL10Ac8g18396 Beta vulgaris HOM05D002350 ORTHO05D000091 7.5e-06 58.2 213 26.8
Cfa003194 Carpinus fangiana HOM05D002350 ORTHO05D000091 7.5e-06 58.2 223 24.7
MBI04_g17295_MAGBIO Magnolia biondii HOM05D002350 ORTHO05D000091 7.5e-06 58.2 220 25.9
Sed0013258 Sechium edule HOM05D002350 ORTHO05D000091 7.5e-06 58.2 222 27.5
MSTRG.10607 Avicennia marina HOM05D002350 ORTHO05D000091 9.7e-06 57.8 225 25.8
A10p17220 Brassica napus HOM05D002350 ORTHO05D000091 9.7e-06 57.8 230 24.8
Carub.0003s3417 Capsella rubella HOM05D002350 ORTHO05D000091 9.7e-06 57.8 225 25.8
MELO3C015406.2 Cucumis melo HOM05D002350 ORTHO05D000091 9.7e-06 57.8 228 26.8
Thhalv10001897m.g Eutrema salsugineum HOM05D002350 ORTHO05D000091 9.7e-06 57.8 248 25.0
FAN19G2534 Fragaria x ananassa HOM05D002350 ORTHO05D000091 9.7e-06 57.8 225 25.8
SMO146G0176 Selaginella moellendorffii HOM05D002350 ORTHO05D000091 9.7e-06 57.8 241 24.1


User provided reference genes

Program Settings