Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cre03.g205650 Chlamydomonas reinhardtii HOM05D004469 ORTHO05D005429 2.7e-272 941.8 625 100.0
Pp3c3_18690 Physcomitrium patens HOM05D004469 ORTHO05D005429 1.1e-68 265.4 411 42.3
AagrBONN_evm.TU.Sc2ySwM_344.1954 Anthoceros agrestis HOM05D004469 ORTHO05D005429 1.2e-67 261.9 406 42.1
Mapoly0101s0042 Marchantia polymorpha HOM05D004469 ORTHO05D005429 8.0e-67 259.2 403 42.9
SMO367G0076 Selaginella moellendorffii HOM05D004469 ORTHO05D005429 7.0e-63 246.1 404 42.8
Sc08g0006010 Simmondsia chinensis HOM05D004469 ORTHO05D005429 1.3e-61 241.9 422 37.9
EL10Ac8g18788 Beta vulgaris HOM05D004469 ORTHO05D005429 1.7e-61 241.5 413 38.7
Sed0012323 Sechium edule HOM05D004469 ORTHO05D005429 1.7e-61 241.5 403 40.9
Hund09311 Selenicereus undatus HOM05D004469 ORTHO05D005429 1.1e-60 238.8 415 38.8
Aa31sc54G60 Aethionema arabicum HOM05D004469 ORTHO05D005429 1.5e-60 238.4 409 39.4
TAR625G0398 Trochodendron aralioides HOM05D004469 ORTHO05D005429 1.5e-60 238.4 410 38.8
Medtr2g450730 Medicago truncatula HOM05D004469 ORTHO05D005429 2.5e-60 237.7 410 38.8
BolC3t17859H Brassica oleracea HOM05D004469 ORTHO05D005429 3.3e-60 237.3 411 39.2
MD15G1162100 Malus domestica HOM05D004469 ORTHO05D005429 4.2e-60 236.9 410 38.3
Migut.J01235 Erythranthe guttata HOM05D004469 ORTHO05D005429 7.2e-60 236.1 412 38.8
C03p55780 Brassica napus HOM05D004469 ORTHO05D005429 9.5e-60 235.7 411 38.9
CARHR105080 Cardamine hirsuta HOM05D004469 ORTHO05D005429 9.5e-60 235.7 397 39.8
Nn2g12194 Nelumbo nucifera HOM05D004469 ORTHO05D005429 2.1e-59 234.6 423 37.8
RcHm_v2.0_Chr5g0061231 Rosa chinensis HOM05D004469 ORTHO05D005429 2.1e-59 234.6 411 38.2
arahy.Tifrunner.gnm1.ann1.2E9WSC Arachis hypogaea HOM05D004469 ORTHO05D005429 2.8e-59 234.2 417 38.1
AUR62020006 Chenopodium quinoa HOM05D004469 ORTHO05D005429 3.6e-59 233.8 413 36.8
Cfa002260 Carpinus fangiana HOM05D004469 ORTHO05D005429 4.7e-59 233.4 410 37.6
ECA234G1865 Erigeron canadensis HOM05D004469 ORTHO05D005429 4.7e-59 233.4 401 37.7
PGR102G2677 Punica granatum HOM05D004469 ORTHO05D005429 6.1e-59 233.0 409 37.9
GSVIVG01012860001 Vitis vinifera HOM05D004469 ORTHO05D005429 6.1e-59 233.0 408 37.0
ClCG11G003510 Citrullus lanatus HOM05D004469 ORTHO05D005429 8.0e-59 232.6 405 39.5
Cc06_g07630 Coffea canephora HOM05D004469 ORTHO05D005429 8.0e-59 232.6 413 37.3
Zm00001eb068670 Zea mays HOM05D004469 ORTHO05D005429 8.0e-59 232.6 429 38.9
arahy.Tifrunner.gnm1.ann1.K75BJP Arachis hypogaea HOM05D004469 ORTHO05D005429 1.4e-58 231.9 417 37.6
A03p44900 Brassica napus HOM05D004469 ORTHO05D005429 1.4e-58 231.9 407 38.8
CiPaw.04G177500 Carya illinoinensis HOM05D004469 ORTHO05D005429 1.8e-58 231.5 410 37.6
Thhalv10001944m.g Eutrema salsugineum HOM05D004469 ORTHO05D005429 1.8e-58 231.5 409 37.9
Carub.0003s2782 Capsella rubella HOM05D004469 ORTHO05D005429 2.3e-58 231.1 396 39.4
BcaB08g34526 Brassica carinata HOM05D004469 ORTHO05D005429 3.0e-58 230.7 409 38.6
BraA03t13626Z Brassica rapa HOM05D004469 ORTHO05D005429 3.0e-58 230.7 412 38.6
AT2G12550 Arabidopsis thaliana HOM05D004469 ORTHO05D005429 5.2e-58 229.9 396 39.6
VMungo1309G2337 Vigna mungo HOM05D004469 ORTHO05D005429 5.2e-58 229.9 411 37.7
Aqoxy7G03591 Aquilegia oxysepala HOM05D004469 ORTHO05D005429 6.8e-58 229.6 410 37.8
DCAR_014918 Daucus carota HOM05D004469 ORTHO05D005429 8.9e-58 229.2 407 36.6
FvH4_1g01990 Fragaria vesca HOM05D004469 ORTHO05D005429 8.9e-58 229.2 410 37.3
AL3G45030 Arabidopsis lyrata HOM05D004469 ORTHO05D005429 1.2e-57 228.8 396 39.1
Prupe.7G257500 Prunus persica HOM05D004469 ORTHO05D005429 1.2e-57 228.8 410 37.1
AUR62011228 Chenopodium quinoa HOM05D004469 ORTHO05D005429 1.5e-57 228.4 416 36.1
RcHm_v2.0_Chr2g0087051 Rosa chinensis HOM05D004469 ORTHO05D005429 1.5e-57 228.4 411 37.0
QL02p090812 Quercus lobata HOM05D004469 ORTHO05D005429 2.0e-57 228.0 410 37.6
TWI32G1222 Tripterygium wilfordii HOM05D004469 ORTHO05D005429 2.0e-57 228.0 413 38.0
Lj6g0024161 Lotus japonicus HOM05D004469 ORTHO05D005429 2.6e-57 227.6 403 37.0
Lalb_Chr11g0073091 Lupinus albus HOM05D004469 ORTHO05D005429 2.6e-57 227.6 419 37.0
Phvul.009G212100 Phaseolus vulgaris HOM05D004469 ORTHO05D005429 2.6e-57 227.6 410 37.6
Haze_25443 Corylus avellana HOM05D004469 ORTHO05D005429 3.4e-57 227.3 414 37.2
MELO3C004484.2 Cucumis melo HOM05D004469 ORTHO05D005429 3.4e-57 227.3 403 39.0
MSTRG.19616 Avicennia marina HOM05D004469 ORTHO05D005429 7.5e-57 226.1 408 38.0
Thhalv10022623m.g Eutrema salsugineum HOM05D004469 ORTHO05D005429 7.5e-57 226.1 409 37.7
CsaV3_2G003380 Cucumis sativus L. HOM05D004469 ORTHO05D005429 9.8e-57 225.7 403 39.0
CSS0041761 Camellia sinensis var. sinensis HOM05D004469 ORTHO05D005429 1.7e-56 224.9 410 37.1
COL.COLO4_33364 Corchorus olitorius HOM05D004469 ORTHO05D005429 2.2e-56 224.6 409 37.7
HanXRQChr10g0314151 Helianthus annuus HOM05D004469 ORTHO05D005429 2.2e-56 224.6 402 36.8
Lsat_1_v5_gn_5_92700 Lactuca sativa HOM05D004469 ORTHO05D005429 2.2e-56 224.6 402 36.6
Glyma.15G198300 Glycine max HOM05D004469 ORTHO05D005429 3.7e-56 223.8 410 36.1
Nitab4.5_0002286g0020 Nicotiana tabacum HOM05D004469 ORTHO05D005429 3.7e-56 223.8 418 37.3
Psat1g021280 Pisum sativum HOM05D004469 ORTHO05D005429 3.7e-56 223.8 409 37.4
CAN.G1281.7 Capsicum annuum HOM05D004469 ORTHO05D005429 4.9e-56 223.4 416 37.3
Sopen07g003440 Solanum pennellii HOM05D004469 ORTHO05D005429 6.3e-56 223.0 421 37.1
PGSC0003DMG400030724 Solanum tuberosum HOM05D004469 ORTHO05D005429 6.3e-56 223.0 418 36.8
Atru.chr7.2015 Acer truncatum HOM05D004469 ORTHO05D005429 8.3e-56 222.6 408 36.5
Ca_03095_v3 Cicer arietinum L. HOM05D004469 ORTHO05D005429 8.3e-56 222.6 410 37.8
Solyc07g007370.3 Solanum lycopersicum HOM05D004469 ORTHO05D005429 8.3e-56 222.6 414 37.2
ATR0767G179 Amborella trichopoda HOM05D004469 ORTHO05D005429 1.1e-55 222.2 410 36.8
Cpa.g.sc46.70 Carica papaya HOM05D004469 ORTHO05D005429 1.4e-55 221.9 410 36.6
Glyma.09G091700 Glycine max HOM05D004469 ORTHO05D005429 1.4e-55 221.9 411 36.7
FAN19G1855 Fragaria x ananassa HOM05D004469 ORTHO05D005429 1.8e-55 221.5 426 36.2
Gorai.004G109600 Gossypium raimondii HOM05D004469 ORTHO05D005429 1.8e-55 221.5 413 36.8
Nitab4.5_0002845g0050 Nicotiana tabacum HOM05D004469 ORTHO05D005429 1.8e-55 221.5 418 37.1
PSO210G6517 Papaver somniferum HOM05D004469 ORTHO05D005429 2.4e-55 221.1 417 37.6
Sp3g26680 Schrenkiella parvula HOM05D004469 ORTHO05D005429 2.4e-55 221.1 411 38.2
CANSAT11G1945 Cannabis sativa HOM05D004469 ORTHO05D005429 4.1e-55 220.3 410 35.1
FAN26G0918 Fragaria x ananassa HOM05D004469 ORTHO05D005429 4.1e-55 220.3 410 36.6
Thecc.09G137700 Theobroma cacao HOM05D004469 ORTHO05D005429 4.1e-55 220.3 412 37.1
FvH4_3g33700 Fragaria vesca HOM05D004469 ORTHO05D005429 5.4e-55 219.9 412 36.7
FAN21G2818 Fragaria x ananassa HOM05D004469 ORTHO05D005429 5.4e-55 219.9 410 36.1
Gohir.D08G101600 Gossypium hirsutum HOM05D004469 ORTHO05D005429 5.4e-55 219.9 411 36.3
Ciclev10007887m.g Citrus clementina HOM05D004469 ORTHO05D005429 9.2e-55 219.2 414 37.0
FAN28G2138 Fragaria x ananassa HOM05D004469 ORTHO05D005429 9.2e-55 219.2 426 35.7
Rhsim03G0253400 Rhododendron simsii HOM05D004469 ORTHO05D005429 1.2e-54 218.8 406 36.2
Gohir.A08G091100 Gossypium hirsutum HOM05D004469 ORTHO05D005429 1.6e-54 218.4 411 35.8
Manes.14G119700 Manihot esculenta HOM05D004469 ORTHO05D005429 1.6e-54 218.4 409 36.2
SalBow1G3789 Salvia bowleyana HOM05D004469 ORTHO05D005429 2.0e-54 218.0 408 37.3
HPP92_003256 Vanilla planifolia HOM05D004469 ORTHO05D005429 2.7e-54 217.6 410 36.6
arahy.Tifrunner.gnm1.ann1.T08WW4 Arachis hypogaea HOM05D004469 ORTHO05D005429 3.5e-54 217.2 414 36.7
FAN11G3069 Fragaria x ananassa HOM05D004469 ORTHO05D005429 3.5e-54 217.2 412 36.7
Oeu028017.1 Olea europaea HOM05D004469 ORTHO05D005429 5.9e-54 216.5 411 36.5
Peaxi162Scf00088g00521 Petunia axillaris HOM05D004469 ORTHO05D005429 5.9e-54 216.5 415 36.1
Actinidia26357 Actinidia chinensis HOM05D004469 ORTHO05D005429 7.8e-54 216.1 414 36.5
Potri.018G118143 Populus trichocarpa HOM05D004469 ORTHO05D005429 7.8e-54 216.1 411 36.5
Duzib187G0975 Durio zibethinus HOM05D004469 ORTHO05D005429 1.7e-53 214.9 421 36.3
FAN23G0971 Fragaria x ananassa HOM05D004469 ORTHO05D005429 2.3e-53 214.5 426 35.2
MBI14_g24228_MAGBIO Magnolia biondii HOM05D004469 ORTHO05D005429 2.3e-53 214.5 402 37.1
Lj9C704T18 Lonicera japonica HOM05D004469 ORTHO05D005429 2.9e-53 214.2 405 36.3
Sabra06G0044100 Salix brachista HOM05D004469 ORTHO05D005429 8.6e-53 212.6 406 36.9
THA.LOC104808947 Tarenaya hassleriana HOM05D004469 ORTHO05D005429 8.6e-53 212.6 417 36.7
SEGI_05144 Sequoiadendron giganteum HOM05D004469 ORTHO05D005429 2.8e-51 207.6 410 36.3
Aqoxy3G02754 Aquilegia oxysepala HOM05D004469 ORTHO05D005429 3.6e-51 207.2 402 35.6
unitig_27.g25106 Utricularia gibba HOM05D004469 ORTHO05D005429 2.0e-49 201.4 426 36.2
Dinv41443 Davidia involucrata HOM05D004469 ORTHO05D005429 8.3e-48 196.1 269 40.9
arahy.Tifrunner.gnm1.ann1.FNUG0A Arachis hypogaea HOM05D004469 ORTHO05D005429 1.4e-47 195.3 428 32.7
Eucgr.L03235 Eucalyptus grandis HOM05D004469 ORTHO05D005429 2.4e-47 194.5 274 40.1
Eucgr.L03187 Eucalyptus grandis HOM05D004469 ORTHO05D005429 1.2e-46 192.2 274 39.8
TPR.G23109 Trifolium pratense HOM05D004469 ORTHO05D005429 1.3e-45 188.7 375 36.0
Actinidia14229 Actinidia chinensis HOM05D004469 ORTHO05D005429 3.0e-45 187.6 269 40.1
Sabra18G0101500 Salix brachista HOM05D004469 ORTHO05D005429 8.6e-45 186.0 433 34.6
Sabra18G0099700 Salix brachista HOM05D004469 ORTHO05D005429 2.5e-44 184.5 433 34.4
Duzib168G2148 Durio zibethinus HOM05D004469 ORTHO05D005429 7.3e-44 183.0 285 40.0
vmacro06114 Vaccinium macrocarpon HOM05D004469 ORTHO05D005429 8.0e-43 179.5 502 29.9
BcaC01g03128 Brassica carinata HOM05D004469 ORTHO05D005429 1.1e-42 179.1 242 42.6
Potri.006G061500 Populus trichocarpa HOM05D004469 ORTHO05D005429 2.6e-41 174.5 260 40.4
FAN25G0032 Fragaria x ananassa HOM05D004469 ORTHO05D005429 3.4e-41 174.1 344 36.0
Glyma.17G107100 Glycine max HOM05D004469 ORTHO05D005429 3.5e-38 164.1 407 33.2
FAN16G0997 Fragaria x ananassa HOM05D004469 ORTHO05D005429 1.9e-31 141.7 411 30.4
CDE05G2521 Ceratophyllum demersum HOM05D004469 ORTHO05D005429 2.1e-30 138.3 201 42.3
RcHm_v2.0_Chr5g0016251 Rosa chinensis HOM05D004469 ORTHO05D005429 5.8e-25 120.2 222 35.6
CBR_g57083 Chara braunii HOM05D000019 ORTHO05D000048 9.9e-25 119.4 166 44.0
Nitab4.5_0010073g0010 Nicotiana tabacum HOM05D004469 ORTHO05D005429 8.4e-24 116.3 156 44.2
Duzib168G2240 Durio zibethinus HOM05D004469 ORTHO05D005429 7.8e-22 109.8 412 26.5
RcHm_v2.0_Chr1g0341141 Rosa chinensis HOM05D004469 ORTHO05D005429 8.7e-21 106.3 171 39.2
CiPaw.04G177800 Carya illinoinensis HOM05D004469 ORTHO05D005429 2.0e-17 95.1 252 31.7
arahy.Tifrunner.gnm1.ann1.WC6UXQ Arachis hypogaea HOM05D004469 ORTHO05D005429 7.6e-17 93.2 414 26.1
RcHm_v2.0_Chr5g0061311 Rosa chinensis HOM05D004469 ORTHO05D005429 9.9e-17 92.8 142 39.4
FAN28G2979 Fragaria x ananassa HOM05D004469 ORTHO05D005429 2.2e-16 91.7 163 35.0
RcHm_v2.0_Chr1g0314541 Rosa chinensis HOM05D004469 ORTHO05D005429 6.6e-13 80.1 121 39.7
RcHm_v2.0_Chr5g0016141 Rosa chinensis HOM05D004469 ORTHO05D005429 6.6e-13 80.1 121 39.7
arahy.Tifrunner.gnm1.ann1.CP8KSN Arachis hypogaea HOM05D004469 ORTHO05D005429 1.5e-12 79.0 445 24.3
Eucgr.C04399 Eucalyptus grandis HOM05D004469 ORTHO05D005429 4.3e-12 77.4 115 37.4
Eucgr.C04403 Eucalyptus grandis HOM05D004469 ORTHO05D005429 2.0e-09 68.6 173 34.1
RcHm_v2.0_Chr5g0079831 Rosa chinensis HOM05D004469 ORTHO05D005429 2.0e-09 68.6 305 26.9
CBR_g42181 Chara braunii HOM05D000019 ORTHO05D000048 7.6e-09 66.6 248 30.2
RcHm_v2.0_Chr5g0072041 Rosa chinensis HOM05D004469 ORTHO05D005429 9.9e-09 66.2 153 33.3


User provided reference genes

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