Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cre03.g201000 Chlamydomonas reinhardtii HOM05D004234 ORTHO05D004670 0.0e+00 2281.1 1312 100.0
Actinidia31776 Actinidia chinensis HOM05D004234 ORTHO05D004670 3.5e-48 198.4 338 35.5
Lj3g0001566 Lotus japonicus HOM05D004234 ORTHO05D004670 3.5e-48 198.4 332 35.8
SalBow8G0184 Salvia bowleyana HOM05D004234 ORTHO05D004670 4.6e-48 198.0 322 36.6
SalBow8G4519 Salvia bowleyana HOM05D004234 ORTHO05D004670 4.6e-48 198.0 322 36.6
HPP92_020352 Vanilla planifolia HOM05D004234 ORTHO05D004670 6.0e-48 197.6 332 36.1
Aqoxy1G01638 Aquilegia oxysepala HOM05D004234 ORTHO05D004670 7.8e-48 197.2 322 36.6
Aqoxy5G04150 Aquilegia oxysepala HOM05D004234 ORTHO05D004670 7.8e-48 197.2 322 36.6
MD01G1182200 Malus domestica HOM05D004234 ORTHO05D004670 7.8e-48 197.2 328 36.6
Nn6g33942 Nelumbo nucifera HOM05D004234 ORTHO05D004670 7.8e-48 197.2 346 35.8
Zm00001eb404400 Zea mays HOM05D004234 ORTHO05D004670 7.8e-48 197.2 323 37.2
Mapoly0072s0015 Marchantia polymorpha HOM05D004234 ORTHO05D004670 1.3e-47 196.4 322 36.3
GSVIVG01014047001 Vitis vinifera HOM05D004234 ORTHO05D004670 1.3e-47 196.4 322 36.3
CSS0018772 Camellia sinensis var. sinensis HOM05D004234 ORTHO05D004670 1.7e-47 196.1 323 36.8
CiPaw.04G059200 Carya illinoinensis HOM05D004234 ORTHO05D004670 1.7e-47 196.1 322 36.3
MELO3C003311.2 Cucumis melo HOM05D004234 ORTHO05D004670 1.7e-47 196.1 323 36.5
CsaV3_3G050070 Cucumis sativus L. HOM05D004234 ORTHO05D004670 1.7e-47 196.1 323 36.5
HanXRQChr05g0142531 Helianthus annuus HOM05D004234 ORTHO05D004670 1.7e-47 196.1 339 35.1
Prupe.2G276000 Prunus persica HOM05D004234 ORTHO05D004670 1.7e-47 196.1 328 36.0
QL09p005405 Quercus lobata HOM05D004234 ORTHO05D004670 1.7e-47 196.1 322 36.3
Solyc03g093300.3 Solanum lycopersicum HOM05D004234 ORTHO05D004670 1.7e-47 196.1 370 35.4
Sopen03g024080 Solanum pennellii HOM05D004234 ORTHO05D004670 1.7e-47 196.1 370 35.4
TWI39G0359 Tripterygium wilfordii HOM05D004234 ORTHO05D004670 1.7e-47 196.1 322 36.6
TAR636G1879 Trochodendron aralioides HOM05D004234 ORTHO05D004670 1.7e-47 196.1 346 35.3
Aa31LG11G1950 Aethionema arabicum HOM05D004234 ORTHO05D004670 2.3e-47 195.7 322 37.0
Eucgr.H04780 Eucalyptus grandis HOM05D004234 ORTHO05D004670 2.3e-47 195.7 369 34.1
Hund11832 Selenicereus undatus HOM05D004234 ORTHO05D004670 2.3e-47 195.7 335 35.5
VMungo1127G0923 Vigna mungo HOM05D004234 ORTHO05D004670 2.3e-47 195.7 323 37.2
arahy.Tifrunner.gnm1.ann1.11333K Arachis hypogaea HOM05D004234 ORTHO05D004670 3.0e-47 195.3 336 35.7
arahy.Tifrunner.gnm1.ann1.WXBJ4D Arachis hypogaea HOM05D004234 ORTHO05D004670 3.0e-47 195.3 336 35.7
Dinv06568 Davidia involucrata HOM05D004234 ORTHO05D004670 3.0e-47 195.3 322 35.7
Migut.F00484 Erythranthe guttata HOM05D004234 ORTHO05D004670 3.0e-47 195.3 332 35.8
Gohir.A12G198000 Gossypium hirsutum HOM05D004234 ORTHO05D004670 3.0e-47 195.3 322 36.3
Os03g0102400 Oryza sativa ssp. japonica HOM05D004234 ORTHO05D004670 3.0e-47 195.3 330 36.1
ECA233G5771 Erigeron canadensis HOM05D004234 ORTHO05D004670 3.9e-47 194.9 322 36.0
Gohir.A03G059300 Gossypium hirsutum HOM05D004234 ORTHO05D004670 3.9e-47 194.9 343 34.7
Lalb_Chr01g0000341 Lupinus albus HOM05D004234 ORTHO05D004670 3.9e-47 194.9 322 36.3
MD07G1252500 Malus domestica HOM05D004234 ORTHO05D004670 3.9e-47 194.9 328 36.0
Os07g0466200 Oryza sativa ssp. japonica HOM05D004234 ORTHO05D004670 3.9e-47 194.9 323 36.5
RcHm_v2.0_Chr1g0331961 Rosa chinensis HOM05D004234 ORTHO05D004670 3.9e-47 194.9 322 36.0
Sc19g0002070 Simmondsia chinensis HOM05D004234 ORTHO05D004670 3.9e-47 194.9 361 34.1
AUR62002211 Chenopodium quinoa HOM05D004234 ORTHO05D004670 5.1e-47 194.5 322 37.3
AUR62015488 Chenopodium quinoa HOM05D004234 ORTHO05D004670 5.1e-47 194.5 322 37.3
Gohir.D03G106600 Gossypium hirsutum HOM05D004234 ORTHO05D004670 5.1e-47 194.5 343 34.7
Lj1A979T78 Lonicera japonica HOM05D004234 ORTHO05D004670 5.1e-47 194.5 322 36.0
unitig_46.g18765 Utricularia gibba HOM05D004234 ORTHO05D004670 5.1e-47 194.5 335 35.5
COL.COLO4_14105 Corchorus olitorius HOM05D004234 ORTHO05D004670 6.6e-47 194.1 352 34.4
Glyma.09G229600 Glycine max HOM05D004234 ORTHO05D004670 6.6e-47 194.1 322 36.3
Glyma.12G006700 Glycine max HOM05D004234 ORTHO05D004670 6.6e-47 194.1 322 36.3
Gohir.D12G200600 Gossypium hirsutum HOM05D004234 ORTHO05D004670 6.6e-47 194.1 322 36.3
Gorai.008G215700 Gossypium raimondii HOM05D004234 ORTHO05D004670 6.6e-47 194.1 322 36.3
PSO238G0034 Papaver somniferum HOM05D004234 ORTHO05D004670 6.6e-47 194.1 332 35.2
Phvul.011G007500 Phaseolus vulgaris HOM05D004234 ORTHO05D004670 6.6e-47 194.1 322 37.0
Duzib084G1335 Durio zibethinus HOM05D004234 ORTHO05D004670 8.7e-47 193.7 322 35.4
Sed0010040 Sechium edule HOM05D004234 ORTHO05D004670 8.7e-47 193.7 323 36.2
Thecc.03G153900 Theobroma cacao HOM05D004234 ORTHO05D004670 8.7e-47 193.7 368 34.0
Actinidia13581 Actinidia chinensis HOM05D004234 ORTHO05D004670 1.1e-46 193.4 322 36.0
Hma1.2p1_0432F.1_g151850 Hydrangea macrophylla HOM05D004234 ORTHO05D004670 1.1e-46 193.4 322 35.7
Prupe.2G276100 Prunus persica HOM05D004234 ORTHO05D004670 1.1e-46 193.4 343 34.4
PGR042G3222 Punica granatum HOM05D004234 ORTHO05D004670 1.1e-46 193.4 338 34.6
ATR0317G048 Amborella trichopoda HOM05D004234 ORTHO05D004670 1.5e-46 193.0 334 35.0
Ciclev10004769m.g Citrus clementina HOM05D004234 ORTHO05D004670 1.5e-46 193.0 322 36.0
FvH4_7g05310 Fragaria vesca HOM05D004234 ORTHO05D004670 1.5e-46 193.0 322 35.7
FAN03G3162 Fragaria x ananassa HOM05D004234 ORTHO05D004670 1.5e-46 193.0 322 35.7
Manes.06G133800 Manihot esculenta HOM05D004234 ORTHO05D004670 1.5e-46 193.0 322 35.7
Nitab4.5_0002816g0120 Nicotiana tabacum HOM05D004234 ORTHO05D004670 1.5e-46 193.0 382 34.8
Potri.001G125700 Populus trichocarpa HOM05D004234 ORTHO05D004670 1.5e-46 193.0 350 34.0
FAN10G4258 Fragaria x ananassa HOM05D004234 ORTHO05D004670 1.9e-46 192.6 322 35.7
DCAR_014620 Daucus carota HOM05D004234 ORTHO05D004670 2.5e-46 192.2 323 36.2
Medtr4g036835 Medicago truncatula HOM05D004234 ORTHO05D004670 2.5e-46 192.2 322 35.7
Gorai.003G113100 Gossypium raimondii HOM05D004234 ORTHO05D004670 3.3e-46 191.8 343 34.4
AL8G38140 Arabidopsis lyrata HOM05D004234 ORTHO05D004670 4.3e-46 191.4 322 36.3
AT5G61450 Arabidopsis thaliana HOM05D004234 ORTHO05D004670 4.3e-46 191.4 322 36.3
Potri.003G108000 Populus trichocarpa HOM05D004234 ORTHO05D004670 4.3e-46 191.4 347 34.0
AagrBONN_evm.TU.Sc2ySwM_117.258 Anthoceros agrestis HOM05D004234 ORTHO05D004670 7.3e-46 190.7 349 35.2
Lsat_1_v5_gn_1_117561 Lactuca sativa HOM05D004234 ORTHO05D004670 7.3e-46 190.7 319 35.7
Carub.0008s2213 Capsella rubella HOM05D004234 ORTHO05D004670 9.6e-46 190.3 322 35.4
Sabra03G0074900 Salix brachista HOM05D004234 ORTHO05D004670 2.1e-45 189.1 322 35.1
Atru.chr1.756 Acer truncatum HOM05D004234 ORTHO05D004670 2.8e-45 188.7 341 34.0
Ca_25531_v3 Cicer arietinum L. HOM05D004234 ORTHO05D004670 2.8e-45 188.7 163 57.1
Cc02_g04370 Coffea canephora HOM05D004234 ORTHO05D004670 2.8e-45 188.7 347 34.0
RcHm_v2.0_Chr1g0374151 Rosa chinensis HOM05D004234 ORTHO05D004670 2.8e-45 188.7 323 35.3
Sed0020354 Sechium edule HOM05D004234 ORTHO05D004670 2.8e-45 188.7 323 35.6
FAN06G0557 Fragaria x ananassa HOM05D004234 ORTHO05D004670 4.7e-45 188.0 330 34.2
Lsat_1_v5_gn_9_51980 Lactuca sativa HOM05D004234 ORTHO05D004670 4.7e-45 188.0 319 37.0
Pp3c2_13380 Physcomitrium patens HOM05D004234 ORTHO05D004670 6.2e-45 187.6 365 34.0
Psat7g159560 Pisum sativum HOM05D004234 ORTHO05D004670 6.2e-45 187.6 163 56.4
Nn1g00980 Nelumbo nucifera HOM05D004234 ORTHO05D004670 8.1e-45 187.2 322 35.4
CAN.G48.41 Capsicum annuum HOM05D004234 ORTHO05D004670 1.4e-44 186.4 163 57.7
ClCG09G013080 Citrullus lanatus HOM05D004234 ORTHO05D004670 2.4e-44 185.7 339 34.8
CBR_g12525 Chara braunii HOM05D004234 ORTHO05D004670 4.0e-44 184.9 622 29.4
Oeu028187.2 Olea europaea HOM05D004234 ORTHO05D004670 5.3e-44 184.5 346 34.1
MD07G1252600 Malus domestica HOM05D004234 ORTHO05D004670 6.9e-44 184.1 326 33.7
Peaxi162Scf00241g00030 Petunia axillaris HOM05D004234 ORTHO05D004670 6.9e-44 184.1 374 33.2
Nitab4.5_0003490g0020 Nicotiana tabacum HOM05D004234 ORTHO05D004670 9.0e-44 183.7 370 34.1
SGA_v2.0_scaffold2G01218 Striga asiatica HOM05D004234 ORTHO05D004670 1.5e-43 183.0 191 51.8
Thhalv10004229m.g Eutrema salsugineum HOM05D004234 ORTHO05D004670 2.0e-43 182.6 322 36.0
Pp3c14_12080 Physcomitrium patens HOM05D004234 ORTHO05D004670 2.0e-43 182.6 370 33.8
Sp2g24650 Schrenkiella parvula HOM05D004234 ORTHO05D004670 2.0e-43 182.6 322 36.0
EL10Ac3g05852 Beta vulgaris HOM05D004234 ORTHO05D004670 2.6e-43 182.2 148 60.8
FvH4_7g27310 Fragaria vesca HOM05D004234 ORTHO05D004670 2.6e-43 182.2 330 33.9
FAN06G1565 Fragaria x ananassa HOM05D004234 ORTHO05D004670 3.4e-43 181.8 330 33.6
BcaC06g33149 Brassica carinata HOM05D004234 ORTHO05D004670 7.6e-43 180.6 322 35.1
A03p47040 Brassica napus HOM05D004234 ORTHO05D004670 7.6e-43 180.6 322 35.1
C07p45120 Brassica napus HOM05D004234 ORTHO05D004670 7.6e-43 180.6 322 35.1
BraA03t13827Z Brassica rapa HOM05D004234 ORTHO05D004670 7.6e-43 180.6 322 35.1
BcaC06g33234 Brassica carinata HOM05D004234 ORTHO05D004670 2.2e-42 179.1 322 34.8
BolC7t45034H Brassica oleracea HOM05D004234 ORTHO05D004670 2.2e-42 179.1 322 34.8
Lsat_1_v5_gn_1_117520 Lactuca sativa HOM05D004234 ORTHO05D004670 2.9e-42 178.7 157 55.4
Pp3c17_11550 Physcomitrium patens HOM05D004234 ORTHO05D004670 1.4e-41 176.4 174 51.7
Ah.07g207720 Amaranthus hybridus HOM05D004234 ORTHO05D004670 4.2e-41 174.9 322 35.7
SMO357G0012 Selaginella moellendorffii HOM05D004234 ORTHO05D004670 7.1e-41 174.1 328 35.1
Rhsim09G0190900 Rhododendron simsii HOM05D004234 ORTHO05D004670 8.1e-37 160.6 394 29.4
PSO210G3536 Papaver somniferum HOM05D004234 ORTHO05D004670 2.2e-34 152.5 332 30.7
FAN03G0204 Fragaria x ananassa HOM05D004234 ORTHO05D004670 1.9e-33 149.4 342 30.4
Nitab4.5_0000262g0110 Nicotiana tabacum HOM05D004234 ORTHO05D004670 3.5e-32 145.2 340 31.8
Duzib205G0275 Durio zibethinus HOM05D004234 ORTHO05D004670 7.4e-30 137.5 325 29.2
Medtr1g056720 Medicago truncatula HOM05D004234 ORTHO05D004670 6.9e-28 131.0 283 30.0
vmacro09913 Vaccinium macrocarpon HOM05D004234 ORTHO05D004670 1.2e-27 130.2 210 38.1
Lsat_1_v5_gn_8_8740 Lactuca sativa HOM05D004234 ORTHO05D004670 2.6e-27 129.0 132 49.2
FAN10G3280 Fragaria x ananassa HOM05D002503 ORTHO05D004670 6.4e-26 124.4 295 28.8
SHI13981 Sapria himalayana HOM05D004234 ORTHO05D004670 6.4e-26 124.4 145 50.3
Peaxi162Scf00304g01343 Petunia axillaris HOM05D004234 ORTHO05D004670 7.1e-25 120.9 295 28.8
FAN01G2714 Fragaria x ananassa HOM05D004234 ORTHO05D004670 6.0e-24 117.9 95 60.0
CAN.G330.4 Capsicum annuum HOM05D004234 ORTHO05D004670 7.9e-24 117.5 288 28.8
FAN03G2107 Fragaria x ananassa HOM05D002503 ORTHO05D004670 7.9e-24 117.5 295 27.8
CSS0026342 Camellia sinensis var. sinensis HOM05D004234 ORTHO05D004670 1.0e-23 117.1 110 56.4
FAN10G1071 Fragaria x ananassa HOM05D004234 ORTHO05D004670 3.0e-23 115.5 170 41.8
Lsat_1_v5_gn_1_117540 Lactuca sativa HOM05D004234 ORTHO05D004670 3.4e-19 102.1 99 48.5
Sabra01G0096800 Salix brachista HOM05D004234 ORTHO05D004670 7.6e-19 100.9 295 26.1
C07p40880 Brassica napus HOM05D004234 ORTHO05D004670 1.3e-18 100.1 109 51.4
Cpa.g.c29748.2 Carica papaya HOM05D004234 ORTHO05D004670 1.3e-18 100.1 74 67.6
Lj8A43G57 Lonicera japonica HOM05D004234 ORTHO05D004670 3.8e-18 98.6 284 29.2
BolC7t44614H Brassica oleracea HOM05D004234 ORTHO05D004670 1.1e-17 97.1 108 50.9
arahy.Tifrunner.gnm1.ann1.J8KP6L Arachis hypogaea HOM05D004234 ORTHO05D004670 5.5e-17 94.7 96 50.0
Cpa.g.sc4200.1 Carica papaya HOM05D004234 ORTHO05D004670 1.6e-16 93.2 87 48.3
Solyc06g034180.2 Solanum lycopersicum HOM05D004234 ORTHO05D004670 2.1e-16 92.8 89 50.6
Sopen06g015930 Solanum pennellii HOM05D004234 ORTHO05D000001 2.1e-16 92.8 89 50.6
arahy.Tifrunner.gnm1.ann1.AYL6ZU Arachis hypogaea HOM05D004234 ORTHO05D004670 3.9e-15 88.6 88 51.1
SMO203G0101 Selaginella moellendorffii HOM05D004234 ORTHO05D004670 2.5e-14 85.9 252 25.0
arahy.Tifrunner.gnm1.ann1.F7NEP8 Arachis hypogaea HOM05D004234 ORTHO05D004670 1.4e-12 80.1 72 61.1
BcaNung02453 Brassica carinata HOM05D004234 ORTHO05D004670 2.4e-12 79.3 82 48.8
arahy.Tifrunner.gnm1.ann1.EHKS3S Arachis hypogaea HOM05D004234 ORTHO05D004670 5.9e-11 74.7 71 47.9
SEGI_30601 Sequoiadendron giganteum HOM05D004234 ORTHO05D004670 2.5e-09 69.3 57 54.4
Haze_13878 Corylus avellana HOM05D004234 ORTHO05D004670 6.1e-08 64.7 39 74.4
Actinidia24997 Actinidia chinensis HOM05D004234 ORTHO05D004670 1.0e-07 63.9 39 74.4
SEGI_09779 Sequoiadendron giganteum HOM05D004234 ORTHO05D004670 2.3e-07 62.8 44 63.6
Haze_13877 Corylus avellana HOM05D004234 ORTHO05D004670 5.1e-07 61.6 39 59.0
PRCOL_00000881 Prasinoderma coloniale HOM05D004234 ORTHO05D004670 8.8e-07 60.8 72 54.2
Peaxi162Scf00304g01326 Petunia axillaris HOM05D004234 ORTHO05D004670 1.1e-06 60.5 40 70.0
SEGI_04441 Sequoiadendron giganteum HOM05D004234 ORTHO05D004670 1.1e-06 60.5 81 44.4
Nitab4.5_0000448g0090 Nicotiana tabacum HOM05D004234 ORTHO05D004670 1.5e-06 60.1 57 42.1
CARHR275210 Cardamine hirsuta HOM05D004234 ORTHO05D004670 3.3e-06 58.9 39 59.0
Dinv16843 Davidia involucrata HOM05D004234 ORTHO05D004670 5.7e-06 58.2 67 34.3
PGSC0003DMG400021593 Solanum tuberosum HOM05D004234 ORTHO05D004670 5.7e-06 58.2 57 52.6


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