Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cre03.g200650 Chlamydomonas reinhardtii HOM05D001772 ORTHO05D008903 1.7e-243 845.5 415 100.0
Pp3c22_2040 Physcomitrium patens HOM05D001772 ORTHO05D008903 7.7e-66 255.4 387 37.0
Ca_25036_v3 Cicer arietinum L. HOM05D001772 ORTHO05D008903 1.4e-64 251.1 380 35.3
Nn3g19051 Nelumbo nucifera HOM05D001772 ORTHO05D008903 1.4e-64 251.1 370 36.2
PSO135G0498 Papaver somniferum HOM05D001772 ORTHO05D008903 4.6e-63 246.1 381 34.9
Medtr5g025480 Medicago truncatula HOM05D001772 ORTHO05D008903 1.0e-62 245.0 378 35.2
TAR375G0197 Trochodendron aralioides HOM05D001772 ORTHO05D008903 1.0e-62 245.0 375 34.7
VMungo0540G0918 Vigna mungo HOM05D001772 ORTHO05D008903 1.4e-62 244.6 394 34.5
CSS0012714 Camellia sinensis var. sinensis HOM05D001772 ORTHO05D008903 3.0e-62 243.4 371 34.8
Aa31LG5G920 Aethionema arabicum HOM05D001772 ORTHO05D008903 3.9e-62 243.0 378 34.4
Oeu007903.1 Olea europaea HOM05D001772 ORTHO05D008903 3.9e-62 243.0 375 33.6
Duzib138G1524 Durio zibethinus HOM05D001772 ORTHO05D008903 5.1e-62 242.7 397 34.3
arahy.Tifrunner.gnm1.ann1.HV5NER Arachis hypogaea HOM05D001772 ORTHO05D008903 6.7e-62 242.3 375 34.9
CAN.G239.5 Capsicum annuum HOM05D001772 ORTHO05D008903 6.7e-62 242.3 375 34.7
CARHR249250 Cardamine hirsuta HOM05D001772 ORTHO05D008903 8.8e-62 241.9 381 35.2
PSO384G4631 Papaver somniferum HOM05D001772 ORTHO05D008903 8.8e-62 241.9 381 33.3
Lsat_1_v5_gn_3_139600 Lactuca sativa HOM05D001772 ORTHO05D008903 1.1e-61 241.5 373 33.8
TPR.G8988 Trifolium pratense HOM05D001772 ORTHO05D008903 1.1e-61 241.5 381 33.9
arahy.Tifrunner.gnm1.ann1.NY4TXX Arachis hypogaea HOM05D001772 ORTHO05D008903 2.0e-61 240.7 375 34.9
Aqoxy7G00133 Aquilegia oxysepala HOM05D001772 ORTHO05D008903 3.3e-61 240.0 376 33.5
SGA_v2.0_scaffold11G05728 Striga asiatica HOM05D001772 ORTHO05D008903 4.4e-61 239.6 374 32.6
Psat2g145680 Pisum sativum HOM05D001772 ORTHO05D008903 7.4e-61 238.8 377 34.5
Dinv18731 Davidia involucrata HOM05D001772 ORTHO05D008903 2.2e-60 237.3 383 33.9
GSVIVG01027076001 Vitis vinifera HOM05D001772 ORTHO05D008903 2.8e-60 236.9 375 34.4
Lalb_Chr04g0261581 Lupinus albus HOM05D001772 ORTHO05D008903 3.7e-60 236.5 351 36.5
CDE10G0091 Ceratophyllum demersum HOM05D001772 ORTHO05D008903 4.8e-60 236.1 377 34.7
QL04p013773 Quercus lobata HOM05D001772 ORTHO05D008903 4.8e-60 236.1 379 33.2
Carub.0006s3610 Capsella rubella HOM05D001772 ORTHO05D008903 6.3e-60 235.7 381 33.6
Sp6g01100 Schrenkiella parvula HOM05D001772 ORTHO05D008903 6.3e-60 235.7 379 33.5
Thecc.01G344900 Theobroma cacao HOM05D001772 ORTHO05D008903 8.2e-60 235.3 391 35.0
Gohir.D12G114800 Gossypium hirsutum HOM05D001772 ORTHO05D008903 1.4e-59 234.6 379 34.6
PGR042G2345 Punica granatum HOM05D001772 ORTHO05D008903 1.4e-59 234.6 379 34.6
Sopen05g028720 Solanum pennellii HOM05D001772 ORTHO05D008903 1.8e-59 234.2 379 33.5
vmacro13174 Vaccinium macrocarpon HOM05D001772 ORTHO05D008903 1.8e-59 234.2 371 33.7
Gohir.A12G111500 Gossypium hirsutum HOM05D001772 ORTHO05D008903 2.4e-59 233.8 380 33.9
Lj1g0009750 Lotus japonicus HOM05D001772 ORTHO05D008903 2.4e-59 233.8 368 34.0
Gorai.008G124300 Gossypium raimondii HOM05D001772 ORTHO05D008903 3.1e-59 233.4 380 34.2
PGSC0003DMG402033880 Solanum tuberosum HOM05D001772 ORTHO05D008903 3.1e-59 233.4 375 33.6
Zm00001eb358410 Zea mays HOM05D001772 ORTHO05D008903 4.1e-59 233.0 382 36.1
Manes.05G024600 Manihot esculenta HOM05D001772 ORTHO05D008903 6.9e-59 232.3 378 33.3
Potri.014G096700 Populus trichocarpa HOM05D001772 ORTHO05D008903 6.9e-59 232.3 376 32.2
BcaC01g06839 Brassica carinata HOM05D001772 ORTHO05D008903 9.1e-59 231.9 365 33.7
MD07G1147600 Malus domestica HOM05D001772 ORTHO05D008903 1.2e-58 231.5 384 32.6
C03p38820 Brassica napus HOM05D001772 ORTHO05D008903 1.5e-58 231.1 363 34.2
COL.COLO4_06307 Corchorus olitorius HOM05D001772 ORTHO05D008903 2.0e-58 230.7 378 34.1
BolC3t16157H Brassica oleracea HOM05D001772 ORTHO05D008903 4.5e-58 229.6 363 33.9
Thhalv10028671m.g Eutrema salsugineum HOM05D001772 ORTHO05D008903 4.5e-58 229.6 376 32.7
AT4G01040 Arabidopsis thaliana HOM05D001772 ORTHO05D008903 1.0e-57 228.4 381 33.1
CANSAT56G1679 Cannabis sativa HOM05D001772 ORTHO05D008903 1.0e-57 228.4 382 31.4
Migut.N01555 Erythranthe guttata HOM05D001772 ORTHO05D008903 1.3e-57 228.0 376 31.1
FvH4_7g16200 Fragaria vesca HOM05D001772 ORTHO05D008903 1.3e-57 228.0 395 33.9
MD01G1078600 Malus domestica HOM05D001772 ORTHO05D008903 1.3e-57 228.0 375 33.3
Rhsim07G0005700 Rhododendron simsii HOM05D001772 ORTHO05D008903 2.2e-57 227.3 369 32.8
A03p31810 Brassica napus HOM05D001772 ORTHO05D008903 3.8e-57 226.5 363 33.3
AUR62004469 Chenopodium quinoa HOM05D001772 ORTHO05D008903 3.8e-57 226.5 372 34.1
ClCG05G000920 Citrullus lanatus HOM05D001772 ORTHO05D008903 3.8e-57 226.5 376 32.7
AUR62023481 Chenopodium quinoa HOM05D001772 ORTHO05D008903 5.0e-57 226.1 372 34.1
Atru.chr5.644 Acer truncatum HOM05D001772 ORTHO05D008903 8.5e-57 225.3 372 34.1
SMO347G0199 Selaginella moellendorffii HOM05D001772 ORTHO05D008903 8.5e-57 225.3 341 37.2
FAN03G0169 Fragaria x ananassa HOM05D001772 ORTHO05D008903 1.1e-56 224.9 386 33.4
SMO167G0031 Selaginella moellendorffii HOM05D001772 ORTHO05D008903 1.1e-56 224.9 339 37.2
RcHm_v2.0_Chr1g0359211 Rosa chinensis HOM05D001772 ORTHO05D008903 1.4e-56 224.6 389 32.1
BraA03t12356Z Brassica rapa HOM05D001772 ORTHO05D008903 1.9e-56 224.2 363 32.8
Eucgr.E00067 Eucalyptus grandis HOM05D001772 ORTHO05D008903 1.9e-56 224.2 373 33.8
FAN01G1646 Fragaria x ananassa HOM05D001772 ORTHO05D008903 3.2e-56 223.4 390 34.4
Sed0004684 Sechium edule HOM05D001772 ORTHO05D008903 9.4e-56 221.9 346 34.1
CsaV3_3G008150 Cucumis sativus L. HOM05D001772 ORTHO05D008903 1.2e-55 221.5 341 35.5
Sabra14G0070800 Salix brachista HOM05D001772 ORTHO05D008903 1.2e-55 221.5 366 32.2
SalBow5G1378 Salvia bowleyana HOM05D001772 ORTHO05D008903 1.6e-55 221.1 404 31.9
Solyc05g050320.4 Solanum lycopersicum HOM05D001772 ORTHO05D008903 2.1e-55 220.7 365 32.1
Cc02_g39160 Coffea canephora HOM05D001772 ORTHO05D008903 2.7e-55 220.3 374 32.1
THA.LOC104825876 Tarenaya hassleriana HOM05D001772 ORTHO05D008903 2.7e-55 220.3 371 32.3
Cfa003819 Carpinus fangiana HOM05D001772 ORTHO05D008903 4.7e-55 219.5 371 32.9
Ah.05g179760 Amaranthus hybridus HOM05D001772 ORTHO05D008903 6.1e-55 219.2 380 32.9
BcaB01g02345 Brassica carinata HOM05D001772 ORTHO05D008903 6.1e-55 219.2 363 32.5
Ciclev10020231m.g Citrus clementina HOM05D001772 ORTHO05D008903 7.9e-55 218.8 371 32.6
CANSAT56G1036 Cannabis sativa HOM05D001772 ORTHO05D008903 1.4e-54 218.0 366 30.6
Glyma.03G256800 Glycine max HOM05D001772 ORTHO05D008903 1.4e-54 218.0 342 34.8
Prupe.2G185600 Prunus persica HOM05D001772 ORTHO05D008903 1.4e-54 218.0 413 33.2
AagrBONN_evm.TU.Sc2ySwM_344.1652 Anthoceros agrestis HOM05D001772 ORTHO05D008903 1.8e-54 217.6 427 30.9
ECA240G4072 Erigeron canadensis HOM05D001772 ORTHO05D008903 1.8e-54 217.6 339 36.6
FAN10G2954 Fragaria x ananassa HOM05D001772 ORTHO05D008903 3.0e-54 216.9 391 34.3
Sc01g0002840 Simmondsia chinensis HOM05D001772 ORTHO05D008903 3.9e-54 216.5 380 31.3
FAN06G2365 Fragaria x ananassa HOM05D001772 ORTHO05D008903 5.2e-54 216.1 385 34.0
TWI59G0809 Tripterygium wilfordii HOM05D001772 ORTHO05D008903 5.2e-54 216.1 370 32.7
HanXRQChr11g0353031 Helianthus annuus HOM05D001772 ORTHO05D008903 8.8e-54 215.3 344 34.6
CBR_g3968 Chara braunii HOM05D001772 ORTHO05D008903 2.6e-53 213.8 413 30.8
FAN06G4998 Fragaria x ananassa HOM05D001772 ORTHO05D008903 2.6e-53 213.8 382 34.0
MBI06_g46729_MAGBIO Magnolia biondii HOM05D001772 ORTHO05D008903 3.3e-53 213.4 409 31.1
Hund27212 Selenicereus undatus HOM05D001772 ORTHO05D008903 5.7e-53 212.6 412 30.1
EL10Ac1g00295 Beta vulgaris HOM05D001772 ORTHO05D008903 1.7e-52 211.1 379 31.1
Phvul.006G111900 Phaseolus vulgaris HOM05D001772 ORTHO05D008903 3.7e-52 209.9 336 35.4
Peaxi162Scf00403g00519 Petunia axillaris HOM05D001772 ORTHO05D008903 6.3e-52 209.1 366 30.6
Haze_15635 Corylus avellana HOM05D001772 ORTHO05D008903 4.1e-51 206.5 378 33.6
Mapoly0102s0038 Marchantia polymorpha HOM05D001772 ORTHO05D008903 5.3e-51 206.1 347 34.3
CSS0002891 Camellia sinensis var. sinensis HOM05D001772 ORTHO05D008903 7.7e-50 202.2 336 32.1
Lj9A595T55 Lonicera japonica HOM05D001772 ORTHO05D008903 8.5e-49 198.7 333 33.0
SEGI_01392 Sequoiadendron giganteum HOM05D001772 ORTHO05D008903 1.1e-48 198.4 340 32.6
HPP92_005515 Vanilla planifolia HOM05D001772 ORTHO05D008903 1.6e-47 194.5 365 29.0
Nitab4.5_0000258g0130 Nicotiana tabacum HOM05D001772 ORTHO05D008903 2.1e-47 194.1 322 33.5
DCAR_005380 Daucus carota HOM05D001772 ORTHO05D008903 5.2e-46 189.5 475 26.3
MELO3C006034.2 Cucumis melo HOM05D001772 ORTHO05D008903 1.8e-43 181.0 340 32.6
AL6G52340 Arabidopsis lyrata HOM05D001772 ORTHO05D008903 4.7e-39 166.4 253 36.8
Cpa.g.sc273.9 Carica papaya HOM05D001772 ORTHO05D008903 2.2e-36 157.5 296 32.1
Actinidia10113 Actinidia chinensis HOM05D001772 ORTHO05D008903 1.2e-21 108.6 197 27.4
CiPaw.01G074400 Carya illinoinensis HOM05D001772 ORTHO05D008903 5.0e-17 93.2 156 25.6
Nitab4.5_0004506g0060 Nicotiana tabacum HOM05D001772 ORTHO05D008903 5.0e-17 93.2 354 20.6
ATR0589G019 Amborella trichopoda HOM05D001772 ORTHO05D008903 1.2e-15 88.6 175 36.6
Os01g0619800 Oryza sativa ssp. japonica HOM05D001772 ORTHO05D008903 2.2e-12 77.8 109 28.4
Pp3s155_60 Physcomitrium patens HOM05D035085 ORTHO05D312423 2.9e-12 77.4 174 26.4
Nitab4.5_0015177g0010 Nicotiana tabacum HOM05D001772 ORTHO05D000634 3.0e-09 67.4 135 35.6
Zm00001eb297790 Zea mays HOM05D001772 ORTHO05D023027 9.5e-08 62.4 141 36.2


User provided reference genes

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