Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cre03.g200000 Chlamydomonas reinhardtii HOM05D007618 ORTHO05D009606 7.5e-92 340.5 171 100.0
Cre03.g200050 Chlamydomonas reinhardtii HOM05D007618 ORTHO05D009606 1.2e-33 147.1 161 46.0
Mapoly0032s0019 Marchantia polymorpha HOM05D007618 ORTHO05D009606 3.2e-26 122.5 158 36.1
CDE05G0820 Ceratophyllum demersum HOM05D007618 ORTHO05D009606 2.1e-25 119.8 158 36.7
PGR142G1310 Punica granatum HOM05D007618 ORTHO05D009606 7.9e-25 117.9 160 35.6
Eucgr.I01514 Eucalyptus grandis HOM05D007618 ORTHO05D009606 1.3e-24 117.1 160 34.4
Pp3c3_10700 Physcomitrium patens HOM05D007618 ORTHO05D009606 1.3e-24 117.1 168 35.7
QL11p055874 Quercus lobata HOM05D007618 ORTHO05D009606 1.3e-24 117.1 157 36.3
Potri.004G204700 Populus trichocarpa HOM05D007618 ORTHO05D009606 2.3e-24 116.3 160 35.0
SalBow1G1919 Salvia bowleyana HOM05D007618 ORTHO05D009606 2.3e-24 116.3 161 34.2
Nn6g31724 Nelumbo nucifera HOM05D007618 ORTHO05D009606 5.1e-24 115.2 160 35.6
Phvul.009G116000 Phaseolus vulgaris HOM05D007618 ORTHO05D009606 5.1e-24 115.2 156 36.5
PSO541G4833 Papaver somniferum HOM05D007618 ORTHO05D009606 6.7e-24 114.8 158 36.7
TAR376G0137 Trochodendron aralioides HOM05D007618 ORTHO05D009606 6.7e-24 114.8 160 34.4
Hund06167 Selenicereus undatus HOM05D007618 ORTHO05D009606 8.7e-24 114.4 160 35.6
CANSAT64G2827 Cannabis sativa HOM05D007618 ORTHO05D009606 1.1e-23 114.0 158 35.4
Migut.B00014 Erythranthe guttata HOM05D007618 ORTHO05D009606 1.1e-23 114.0 163 32.5
Sed0023624 Sechium edule HOM05D007618 ORTHO05D009606 1.1e-23 114.0 160 35.0
TAR628G0843 Trochodendron aralioides HOM05D007618 ORTHO05D009606 1.1e-23 114.0 160 34.4
MSTRG.19948 Avicennia marina HOM05D007618 ORTHO05D009606 1.5e-23 113.6 156 34.6
arahy.Tifrunner.gnm1.ann1.I7PWT1 Arachis hypogaea HOM05D007618 ORTHO05D009606 1.9e-23 113.2 160 33.8
Dinv14162 Davidia involucrata HOM05D007618 ORTHO05D009606 1.9e-23 113.2 160 33.1
Manes.04G067600 Manihot esculenta HOM05D007618 ORTHO05D009606 3.3e-23 112.5 158 34.8
Prupe.8G177800 Prunus persica HOM05D007618 ORTHO05D009606 5.6e-23 111.7 160 35.0
SGA_v2.0_scaffold32G13341 Striga asiatica HOM05D007618 ORTHO05D009606 5.6e-23 111.7 158 33.5
MD10G1139000 Malus domestica HOM05D007618 ORTHO05D009606 7.4e-23 111.3 158 35.4
Ciclev10029401m.g Citrus clementina HOM05D007618 ORTHO05D009606 9.6e-23 110.9 160 32.5
ClCG02G010360 Citrullus lanatus HOM05D007618 ORTHO05D009606 1.3e-22 110.5 162 33.3
Hma1.2p1_0271F.1_g108950 Hydrangea macrophylla HOM05D007618 ORTHO05D009606 1.3e-22 110.5 159 32.1
Lalb_Chr08g0246841 Lupinus albus HOM05D007618 ORTHO05D009606 1.3e-22 110.5 158 34.2
PSO675G2292 Papaver somniferum HOM05D007618 ORTHO05D009606 1.3e-22 110.5 158 36.1
HPP92_022157 Vanilla planifolia HOM05D007618 ORTHO05D009606 1.3e-22 110.5 160 35.6
MELO3C013504.2 Cucumis melo HOM05D007618 ORTHO05D009606 2.1e-22 109.8 160 33.8
Potri.009G165700 Populus trichocarpa HOM05D007618 ORTHO05D009606 2.1e-22 109.8 158 34.8
Thecc.06G045200 Theobroma cacao HOM05D007618 ORTHO05D009606 2.1e-22 109.8 163 33.7
COL.COLO4_26755 Corchorus olitorius HOM05D007618 ORTHO05D009606 2.8e-22 109.4 162 33.3
Lj1g0004638 Lotus japonicus HOM05D007618 ORTHO05D009606 2.8e-22 109.4 160 35.0
MBI08_g32524_MAGBIO Magnolia biondii HOM05D007618 ORTHO05D009606 3.7e-22 109.0 153 34.0
Sabra04G0138200 Salix brachista HOM05D007618 ORTHO05D009606 3.7e-22 109.0 157 34.4
Solyc01g112170.3 Solanum lycopersicum HOM05D007618 ORTHO05D009606 3.7e-22 109.0 160 33.8
Sopen01g054220 Solanum pennellii HOM05D007618 ORTHO05D009606 3.7e-22 109.0 160 33.8
Sabra09G0129500 Salix brachista HOM05D007618 ORTHO05D009606 4.8e-22 108.6 155 34.2
CsaV3_6G010180 Cucumis sativus L. HOM05D007618 ORTHO05D009606 6.2e-22 108.2 160 32.5
Glyma.06G000700 Glycine max HOM05D007618 ORTHO05D009606 8.1e-22 107.8 156 34.6
GSVIVG01023981001 Vitis vinifera HOM05D007618 ORTHO05D009606 8.1e-22 107.8 158 33.5
Gorai.011G000800 Gossypium raimondii HOM05D002478 ORTHO05D003331 1.1e-21 107.5 165 32.1
CiPaw.05G091300 Carya illinoinensis HOM05D007618 ORTHO05D009606 1.4e-21 107.1 160 33.8
FvH4_2g16570 Fragaria vesca HOM05D007618 ORTHO05D009606 1.4e-21 107.1 160 33.1
Cc09_g10690 Coffea canephora HOM05D007618 ORTHO05D009606 1.8e-21 106.7 160 34.4
Gohir.D10G000400 Gossypium hirsutum HOM05D007618 ORTHO05D009606 1.8e-21 106.7 163 31.9
EL10Ac9g21249 Beta vulgaris HOM05D007618 ORTHO05D009606 4.0e-21 105.5 165 32.1
FAN15G3577 Fragaria x ananassa HOM05D007618 ORTHO05D009606 4.0e-21 105.5 158 32.9
HanXRQChr14g0459071 Helianthus annuus HOM05D007618 ORTHO05D009606 4.0e-21 105.5 160 31.9
Nitab4.5_0000783g0170 Nicotiana tabacum HOM05D007618 ORTHO05D009606 4.0e-21 105.5 158 34.2
RcHm_v2.0_Chr6g0280641 Rosa chinensis HOM05D007618 ORTHO05D009606 4.0e-21 105.5 158 33.5
FAN27G0591 Fragaria x ananassa HOM05D007618 ORTHO05D009606 2.0e-20 103.2 162 32.1
Cfa005346 Carpinus fangiana HOM05D007618 ORTHO05D009606 4.5e-20 102.1 147 34.0
AUR62011704 Chenopodium quinoa HOM05D007618 ORTHO05D009606 4.5e-20 102.1 172 30.8
Sc18g0005980 Simmondsia chinensis HOM05D007618 ORTHO05D009606 1.7e-19 100.1 147 33.3
Duzib235G1428 Durio zibethinus HOM05D007618 ORTHO05D009606 2.2e-19 99.8 165 32.7
Cre12.g506850 Chlamydomonas reinhardtii HOM05D007618 ORTHO05D009606 3.8e-19 99.0 159 36.5
DCAR_022841 Daucus carota HOM05D007618 ORTHO05D009606 3.8e-19 99.0 159 31.4
arahy.Tifrunner.gnm1.ann1.ZSY7EJ Arachis hypogaea HOM05D007618 ORTHO05D009606 4.2e-18 95.5 162 31.5
Gohir.A10G000200 Gossypium hirsutum HOM05D002478 ORTHO05D003331 4.2e-18 95.5 186 28.5
Peaxi162Scf00362g00251 Petunia axillaris HOM05D007618 ORTHO05D009606 5.5e-18 95.1 160 31.2
CBR_g37948 Chara braunii HOM05D007618 ORTHO05D009606 1.6e-17 93.6 165 32.7
SMO367G1105 Selaginella moellendorffii HOM05D007618 ORTHO05D009606 1.6e-17 93.6 165 32.7
SEGI_37348 Sequoiadendron giganteum HOM05D007618 ORTHO05D009606 1.6e-17 93.6 158 34.8
CBR_g30676 Chara braunii HOM05D007618 ORTHO05D009606 2.7e-17 92.8 165 31.5
VMungo1309G2136 Vigna mungo HOM05D007618 ORTHO05D009606 3.5e-17 92.4 130 36.2
Nitab4.5_0011212g0030 Nicotiana tabacum HOM05D007618 ORTHO05D009606 4.6e-17 92.0 160 31.2
QL11p055571 Quercus lobata HOM05D007618 ORTHO05D009606 1.3e-16 90.5 130 35.4
Lsat_1_v5_gn_8_120421 Lactuca sativa HOM05D007618 ORTHO05D009606 7.4e-15 84.7 148 28.4
Zm00001eb002550 Zea mays HOM05D007618 ORTHO05D009606 7.4e-15 84.7 134 31.3
arahy.Tifrunner.gnm1.ann1.U2J3P2 Arachis hypogaea HOM05D007618 ORTHO05D009606 2.1e-14 83.2 131 32.1
MCO11G779 Micromonas commoda HOM05D007618 ORTHO05D009606 8.2e-14 81.3 167 32.3
Actinidia20565 Actinidia chinensis HOM05D007618 ORTHO05D009606 5.3e-13 78.6 156 26.3
vmacro02327 Vaccinium macrocarpon HOM05D007618 ORTHO05D009606 4.5e-12 75.5 126 30.2
Rhsim11G0196900 Rhododendron simsii HOM05D007618 ORTHO05D009606 8.4e-11 71.2 104 32.7
ECA233G1377 Erigeron canadensis HOM05D007618 ORTHO05D009606 6.1e-09 65.1 110 31.8
TPR.G29338 Trifolium pratense HOM05D007618 ORTHO05D009606 1.3e-08 63.9 94 35.1
Lsat_1_v5_gn_6_38861 Lactuca sativa HOM05D002157 ORTHO05D002197 3.0e-08 62.8 164 29.9
Psat5g000560 Pisum sativum HOM05D007618 ORTHO05D009606 6.7e-08 61.6 70 38.6
AUR62024513 Chenopodium quinoa HOM05D002157 ORTHO05D002197 2.5e-07 59.7 164 26.2
arahy.Tifrunner.gnm1.ann1.UUK80H Arachis hypogaea HOM05D002157 ORTHO05D002197 3.3e-07 59.3 164 26.8
CAN.G1358.7 Capsicum annuum HOM05D002157 ORTHO05D002197 4.3e-07 58.9 167 28.7
AUR62026104 Chenopodium quinoa HOM05D002157 ORTHO05D002197 4.3e-07 58.9 164 25.6
TPR.G38509 Trifolium pratense HOM05D007618 ORTHO05D009606 4.3e-07 58.9 68 38.2
Actinidia39200 Actinidia chinensis HOM05D002157 ORTHO05D002197 5.7e-07 58.5 164 25.6
Ah.04g151430 Amaranthus hybridus HOM05D002157 ORTHO05D002197 7.4e-07 58.2 164 26.2
Hund19131 Selenicereus undatus HOM05D002157 ORTHO05D002197 1.3e-06 57.4 164 27.4
Solyc11g068460.2 Solanum lycopersicum HOM05D002157 ORTHO05D002197 1.6e-06 57.0 169 28.4
CiPaw.09G040500 Carya illinoinensis HOM05D002157 ORTHO05D002197 2.2e-06 56.6 160 25.0
Lalb_Chr06g0173511 Lupinus albus HOM05D002157 ORTHO05D002197 2.2e-06 56.6 164 26.8
PSO170G5035 Papaver somniferum HOM05D002157 ORTHO05D002197 2.2e-06 56.6 165 24.8
Cfa016777 Carpinus fangiana HOM05D002157 ORTHO05D002197 2.8e-06 56.2 160 25.6
CiPaw.10G035600 Carya illinoinensis HOM05D002157 ORTHO05D002197 2.8e-06 56.2 164 25.0
Nitab4.5_0000755g0120 Nicotiana tabacum HOM05D002157 ORTHO05D002197 2.8e-06 56.2 169 27.2
Solyc10g079890.2 Solanum lycopersicum HOM05D002157 ORTHO05D002197 3.7e-06 55.8 164 25.0
Sopen10g030500 Solanum pennellii HOM05D002157 ORTHO05D002197 3.7e-06 55.8 164 25.0
PGSC0003DMG401014675 Solanum tuberosum HOM05D007618 ORTHO05D009606 4.8e-06 55.5 61 41.0
PGSC0003DMG400029828 Solanum tuberosum HOM05D002157 ORTHO05D002197 6.3e-06 55.1 164 25.0
Peaxi162Scf00069g00117 Petunia axillaris HOM05D002157 ORTHO05D002197 8.2e-06 54.7 164 25.0


User provided reference genes

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