Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cre03.g196600 Chlamydomonas reinhardtii HOM05D006562 ORTHO05D008230 0.0e+00 1743.8 1169 100.0
Mapoly0004s0213 Marchantia polymorpha HOM05D006562 ORTHO05D008230 1.3e-41 176.4 715 27.1
ATR0712G114 Amborella trichopoda HOM05D006562 ORTHO05D008230 7.2e-37 160.6 662 27.0
Pp3c8_14180 Physcomitrium patens HOM05D006562 ORTHO05D008230 1.2e-34 153.3 695 26.9
SMO329G0081 Selaginella moellendorffii HOM05D006562 ORTHO05D008230 1.3e-33 149.8 680 24.4
MBI05_g23389_MAGBIO Magnolia biondii HOM05D006562 ORTHO05D008230 2.3e-30 139.0 684 26.3
arahy.Tifrunner.gnm1.ann1.X2JQ1G Arachis hypogaea HOM05D006562 ORTHO05D008230 1.4e-27 129.8 579 24.7
Os03g0242100 Oryza sativa ssp. japonica HOM05D006562 ORTHO05D008230 1.4e-27 129.8 577 24.6
Gorai.011G098200 Gossypium raimondii HOM05D006562 ORTHO05D008230 8.9e-27 127.1 661 24.7
arahy.Tifrunner.gnm1.ann1.6MN492 Arachis hypogaea HOM05D006562 ORTHO05D008230 1.5e-26 126.3 579 24.7
GSVIVG01018736001 Vitis vinifera HOM05D006562 ORTHO05D008230 3.4e-26 125.2 577 25.3
Phvul.003G265000 Phaseolus vulgaris HOM05D006562 ORTHO05D008230 1.3e-25 123.2 661 23.3
Gohir.D10G089300 Gossypium hirsutum HOM05D006562 ORTHO05D008230 3.7e-25 121.7 661 23.9
Sed0025600 Sechium edule HOM05D006562 ORTHO05D008230 4.9e-25 121.3 661 23.1
Medtr8g075250 Medicago truncatula HOM05D006562 ORTHO05D008230 8.3e-25 120.6 652 23.2
Aqoxy5G01815 Aquilegia oxysepala HOM05D006562 ORTHO05D008230 1.8e-24 119.4 579 24.9
MSTRG.15581 Avicennia marina HOM05D006562 ORTHO05D008230 1.8e-24 119.4 582 23.4
RcHm_v2.0_Chr2g0099051 Rosa chinensis HOM05D006562 ORTHO05D008230 1.8e-24 119.4 588 25.7
Zm00001eb398900 Zea mays HOM05D006562 ORTHO05D008230 1.8e-24 119.4 580 25.3
Atru.chr3.853 Acer truncatum HOM05D006562 ORTHO05D008230 2.4e-24 119.0 575 24.9
Thecc.01G014800 Theobroma cacao HOM05D006562 ORTHO05D008230 2.4e-24 119.0 663 23.1
Gohir.A10G098700 Gossypium hirsutum HOM05D006562 ORTHO05D008230 3.2e-24 118.6 661 23.8
FAN28G2818 Fragaria x ananassa HOM05D006562 ORTHO05D008230 4.1e-24 118.2 586 24.7
VMungo0251G0646 Vigna mungo HOM05D006562 ORTHO05D008230 4.1e-24 118.2 656 22.6
AUR62003339 Chenopodium quinoa HOM05D006562 ORTHO05D008230 5.4e-24 117.9 659 23.7
Aa31LG1G14620 Aethionema arabicum HOM05D006562 ORTHO05D008230 9.2e-24 117.1 568 24.6
SGA_v2.0_scaffold229G43296 Striga asiatica HOM05D006562 ORTHO05D008230 9.2e-24 117.1 659 24.1
Glyma.16G124500 Glycine max HOM05D006562 ORTHO05D008230 1.2e-23 116.7 669 23.2
Eucgr.I02333 Eucalyptus grandis HOM05D006562 ORTHO05D008230 1.6e-23 116.3 661 23.9
QL06p051072 Quercus lobata HOM05D006562 ORTHO05D008230 1.6e-23 116.3 582 24.2
TPR.G19508 Trifolium pratense HOM05D006562 ORTHO05D008230 2.0e-23 115.9 578 23.7
CsaV3_6G047340 Cucumis sativus L. HOM05D006562 ORTHO05D008230 2.7e-23 115.5 662 22.5
MD15G1242700 Malus domestica HOM05D006562 ORTHO05D008230 2.7e-23 115.5 578 24.4
PGSC0003DMG400003647 Solanum tuberosum HOM05D006562 ORTHO05D008230 2.7e-23 115.5 579 24.4
CiPaw.07G060900 Carya illinoinensis HOM05D006562 ORTHO05D008230 3.5e-23 115.2 574 24.7
FvH4_1g11470 Fragaria vesca HOM05D006562 ORTHO05D008230 3.5e-23 115.2 665 23.9
Solyc02g083600.4 Solanum lycopersicum HOM05D006562 ORTHO05D008230 3.5e-23 115.2 579 24.7
Dinv33663 Davidia involucrata HOM05D006562 ORTHO05D008230 4.6e-23 114.8 576 24.3
Migut.L00910 Erythranthe guttata HOM05D006562 ORTHO05D008230 4.6e-23 114.8 575 23.3
TWI53G1373 Tripterygium wilfordii HOM05D006562 ORTHO05D008230 4.6e-23 114.8 578 24.6
FAN19G2077 Fragaria x ananassa HOM05D006562 ORTHO05D008230 7.8e-23 114.0 667 24.6
COL.COLO4_22460 Corchorus olitorius HOM05D006562 ORTHO05D008230 1.3e-22 113.2 578 24.0
HPP92_022171 Vanilla planifolia HOM05D006562 ORTHO05D008230 1.3e-22 113.2 584 24.1
CANSAT25G3480 Cannabis sativa HOM05D006562 ORTHO05D008230 1.7e-22 112.8 578 23.5
FAN23G1005 Fragaria x ananassa HOM05D006562 ORTHO05D008230 1.7e-22 112.8 584 24.3
Lj4g0007150 Lotus japonicus HOM05D006562 ORTHO05D008230 2.3e-22 112.5 578 23.2
AUR62029498 Chenopodium quinoa HOM05D006562 ORTHO05D008230 3.9e-22 111.7 575 23.5
Sopen02g028380 Solanum pennellii HOM05D006562 ORTHO05D008230 3.9e-22 111.7 579 24.5
Cfa007000 Carpinus fangiana HOM05D006562 ORTHO05D008230 5.0e-22 111.3 578 24.4
Hund16502 Selenicereus undatus HOM05D006562 ORTHO05D008230 5.0e-22 111.3 561 24.6
EL10Ac6g15524 Beta vulgaris HOM05D006562 ORTHO05D008230 6.6e-22 110.9 653 24.7
vmacro22192 Vaccinium macrocarpon HOM05D006562 ORTHO05D008230 6.6e-22 110.9 575 24.9
Cpa.g.sc6.285 Carica papaya HOM05D006562 ORTHO05D008230 8.6e-22 110.5 578 23.5
Psat4g101960 Pisum sativum HOM05D006562 ORTHO05D008230 8.6e-22 110.5 661 22.4
vmacro22151 Vaccinium macrocarpon HOM05D006562 ORTHO05D008230 8.6e-22 110.5 575 24.7
CARHR281620 Cardamine hirsuta HOM05D006562 ORTHO05D008230 1.1e-21 110.2 578 23.0
Ciclev10025220m.g Citrus clementina HOM05D006562 ORTHO05D008230 1.1e-21 110.2 624 24.5
MCO01G428 Micromonas commoda HOM05D006562 ORTHO05D008230 1.1e-21 110.2 642 25.2
Potri.005G111000 Populus trichocarpa HOM05D006562 ORTHO05D008230 1.1e-21 110.2 626 23.5
TAR376G1060 Trochodendron aralioides HOM05D006562 ORTHO05D008230 1.1e-21 110.2 595 24.7
AL8G45460 Arabidopsis lyrata HOM05D006562 ORTHO05D008230 2.5e-21 109.0 579 22.8
AT5G66130 Arabidopsis thaliana HOM05D006562 ORTHO05D008230 3.3e-21 108.6 579 22.6
Cc07_g11050 Coffea canephora HOM05D006562 ORTHO05D008230 3.3e-21 108.6 569 25.7
Lsat_1_v5_gn_3_72080 Lactuca sativa HOM05D006562 ORTHO05D008230 3.3e-21 108.6 634 24.1
PGR119G1624 Punica granatum HOM05D006562 ORTHO05D008230 3.3e-21 108.6 665 24.2
Manes.01G148500 Manihot esculenta HOM05D006562 ORTHO05D008230 4.3e-21 108.2 619 24.7
Sp2g30560 Schrenkiella parvula HOM05D006562 ORTHO05D008230 4.3e-21 108.2 579 23.1
Ah.03g149120 Amaranthus hybridus HOM05D006562 ORTHO05D008230 5.6e-21 107.8 557 23.7
BolC9t54092H Brassica oleracea HOM05D006562 ORTHO05D008230 5.6e-21 107.8 580 22.9
Lj2A480G48 Lonicera japonica HOM05D006562 ORTHO05D008230 5.6e-21 107.8 578 24.2
Peaxi162Scf00328g00616 Petunia axillaris HOM05D006562 ORTHO05D008230 7.3e-21 107.5 575 24.9
A09p10140 Brassica napus HOM05D006562 ORTHO05D008230 9.5e-21 107.1 579 23.1
BcaC04g23114 Brassica carinata HOM05D006562 ORTHO05D008230 1.2e-20 106.7 579 23.1
C09p12020 Brassica napus HOM05D006562 ORTHO05D008230 1.2e-20 106.7 579 23.0
Carub.0008s2836 Capsella rubella HOM05D006562 ORTHO05D008230 1.2e-20 106.7 579 23.5
DCAR_014038 Daucus carota HOM05D006562 ORTHO05D008230 1.2e-20 106.7 655 23.7
BraA09t36658Z Brassica rapa HOM05D006562 ORTHO05D008230 1.6e-20 106.3 579 22.8
Ca_03628_v3 Cicer arietinum L. HOM05D006562 ORTHO05D008230 2.1e-20 105.9 578 22.7
Haze_03732 Corylus avellana HOM05D006562 ORTHO05D008230 2.1e-20 105.9 698 22.6
Nitab4.5_0001892g0110 Nicotiana tabacum HOM05D006562 ORTHO05D008230 2.8e-20 105.5 575 23.7
SalBow5G1234 Salvia bowleyana HOM05D006562 ORTHO05D008230 2.8e-20 105.5 579 23.1
BcaB04g20123 Brassica carinata HOM05D006562 ORTHO05D008230 4.7e-20 104.8 579 22.8
Thhalv10003881m.g Eutrema salsugineum HOM05D006562 ORTHO05D008230 6.2e-20 104.4 579 22.8
unitig_37.g12438 Utricularia gibba HOM05D006562 ORTHO05D008230 8.0e-20 104.0 585 24.6
Nitab4.5_0003187g0030 Nicotiana tabacum HOM05D006562 ORTHO05D008230 1.0e-19 103.6 574 22.8
Sabra05G0091000 Salix brachista HOM05D006562 ORTHO05D008230 3.1e-19 102.1 627 23.4
SHI08537 Sapria himalayana HOM05D006562 ORTHO05D008230 5.2e-19 101.3 578 22.7
ClCG01G020460 Citrullus lanatus HOM05D006562 ORTHO05D008230 1.2e-18 100.1 599 22.2
Duzib187G1447 Durio zibethinus HOM05D006562 ORTHO05D008230 1.2e-18 100.1 347 28.5
Oeu048479.1 Olea europaea HOM05D006562 ORTHO05D008230 1.5e-18 99.8 575 23.5
HanXRQChr15g0483891 Helianthus annuus HOM05D006562 ORTHO05D008230 2.0e-18 99.4 578 23.5
Sc16g0001970 Simmondsia chinensis HOM05D006562 ORTHO05D008230 3.4e-18 98.6 618 23.1
CSS0025685 Camellia sinensis var. sinensis HOM05D006562 ORTHO05D008230 1.4e-16 93.2 565 23.9
Actinidia22955 Actinidia chinensis HOM05D006562 ORTHO05D008230 2.4e-16 92.4 347 26.5
MELO3C007925.2 Cucumis melo HOM05D006562 ORTHO05D008230 1.6e-15 89.7 584 22.3
Prupe.7G171500 Prunus persica HOM05D006562 ORTHO05D008230 3.5e-15 88.6 557 23.5
PRCOL_00000425 Prasinoderma coloniale HOM05D006562 ORTHO05D008230 4.6e-15 88.2 259 29.3
Lalb_Chr16g0391391 Lupinus albus HOM05D006562 ORTHO05D008230 7.8e-15 87.4 653 21.9
SEGI_24182 Sequoiadendron giganteum HOM05D006562 ORTHO05D008230 3.6e-12 78.6 338 27.2
PSO170G3776 Papaver somniferum HOM05D006562 ORTHO05D008230 3.1e-11 75.5 406 25.9
CAN.G1274.29 Capsicum annuum HOM05D006562 ORTHO05D008230 6.8e-11 74.3 390 24.6
HPP92_022170 Vanilla planifolia HOM05D006562 ORTHO05D008230 1.2e-10 73.6 518 22.6
ECA246G3730 Erigeron canadensis HOM05D006562 ORTHO05D008230 1.1e-08 67.0 372 23.7
Rhsim10G0209300 Rhododendron simsii HOM05D006562 ORTHO05D008230 1.4e-08 66.6 232 25.9
PSO700G0294 Papaver somniferum HOM05D006562 ORTHO05D008230 5.1e-06 58.2 479 21.9


User provided reference genes

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