Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cre03.g193150 Chlamydomonas reinhardtii HOM05D006149 ORTHO05D007341 4.5e-57 224.9 123 100.0
COL.COLO4_32597 Corchorus olitorius HOM05D006149 ORTHO05D007341 2.3e-16 89.7 108 50.9
arahy.Tifrunner.gnm1.ann1.0F7AFP Arachis hypogaea HOM05D006149 ORTHO05D007341 3.9e-16 89.0 112 50.9
arahy.Tifrunner.gnm1.ann1.GUMB1Z Arachis hypogaea HOM05D006149 ORTHO05D007341 3.9e-16 89.0 112 50.9
MSTRG.16714 Avicennia marina HOM05D006149 ORTHO05D007341 3.9e-16 89.0 82 59.8
Os09g0104300 Oryza sativa ssp. japonica HOM05D006149 ORTHO05D007341 8.7e-16 87.8 82 57.3
Hund06318 Selenicereus undatus HOM05D006149 ORTHO05D007341 8.7e-16 87.8 97 53.6
MELO3C019546.2 Cucumis melo HOM05D006149 ORTHO05D007341 1.1e-15 87.4 118 48.3
CDE02G2507 Ceratophyllum demersum HOM05D006149 ORTHO05D007341 1.5e-15 87.0 92 55.4
CDE02G4185 Ceratophyllum demersum HOM05D006149 ORTHO05D007341 1.5e-15 87.0 92 55.4
Glyma.20G128800 Glycine max HOM05D006149 ORTHO05D007341 1.9e-15 86.7 96 53.1
HPP92_004777 Vanilla planifolia HOM05D006149 ORTHO05D007341 1.9e-15 86.7 116 45.7
SGA_v2.0_scaffold225G43080 Striga asiatica HOM05D006149 ORTHO05D007341 2.5e-15 86.3 82 57.3
THA.LOC104807242 Tarenaya hassleriana HOM05D006149 ORTHO05D007341 2.5e-15 86.3 94 55.3
VMungo0720G1566 Vigna mungo HOM05D006149 ORTHO05D007341 2.5e-15 86.3 82 57.3
AL3G46990 Arabidopsis lyrata HOM05D006149 ORTHO05D007341 3.3e-15 85.9 86 55.8
CsaV3_3G018210 Cucumis sativus L. HOM05D006149 ORTHO05D007341 3.3e-15 85.9 118 47.5
Thhalv10022867m.g Eutrema salsugineum HOM05D006149 ORTHO05D007341 4.3e-15 85.5 86 55.8
SalBow6G4084 Salvia bowleyana HOM05D006149 ORTHO05D007341 4.3e-15 85.5 82 56.1
THA.LOC104819555 Tarenaya hassleriana HOM05D006149 ORTHO05D007341 4.3e-15 85.5 81 56.8
Phvul.007G040000 Phaseolus vulgaris HOM05D006149 ORTHO05D007341 5.6e-15 85.1 82 56.1
Lj5g0003815 Lotus japonicus HOM05D006149 ORTHO05D007341 7.3e-15 84.7 82 56.1
TWI34G0529 Tripterygium wilfordii HOM05D006149 ORTHO05D007341 7.3e-15 84.7 94 53.2
AagrBONN_evm.TU.Sc2ySwM_228.2976 Anthoceros agrestis HOM05D006149 ORTHO05D007341 9.6e-15 84.3 80 55.0
HanXRQChr03g0070291 Helianthus annuus HOM05D006149 ORTHO05D007341 9.6e-15 84.3 82 56.1
Migut.B00388 Erythranthe guttata HOM05D006149 ORTHO05D007341 1.3e-14 84.0 82 57.3
TAR628G0594 Trochodendron aralioides HOM05D006149 ORTHO05D007341 1.3e-14 84.0 81 54.3
Dinv42191 Davidia involucrata HOM05D006149 ORTHO05D007341 1.6e-14 83.6 116 44.8
Nn4g25119 Nelumbo nucifera HOM05D006149 ORTHO05D007341 1.6e-14 83.6 112 46.4
Sp3g28510 Schrenkiella parvula HOM05D006149 ORTHO05D007341 1.6e-14 83.6 85 55.3
Dinv15763 Davidia involucrata HOM05D006149 ORTHO05D007341 2.1e-14 83.2 108 49.1
Nn1g04703 Nelumbo nucifera HOM05D006149 ORTHO05D007341 2.1e-14 83.2 83 54.2
Pp3c2_21780 Physcomitrium patens HOM05D006149 ORTHO05D007341 2.1e-14 83.2 82 54.9
Sed0001717 Sechium edule HOM05D006149 ORTHO05D007341 2.1e-14 83.2 80 56.2
Cfa004575 Carpinus fangiana HOM05D006149 ORTHO05D007341 2.8e-14 82.8 81 54.3
Ca_11076_v3 Cicer arietinum L. HOM05D006149 ORTHO05D007341 2.8e-14 82.8 81 55.6
Duzib052G0317 Durio zibethinus HOM05D006149 ORTHO05D007341 2.8e-14 82.8 101 52.5
Gohir.A03G186300 Gossypium hirsutum HOM05D006149 ORTHO05D007341 2.8e-14 82.8 105 49.5
Cpa.g.sc76.22 Carica papaya HOM05D006149 ORTHO05D007341 3.6e-14 82.4 94 51.1
CDE04G1609 Ceratophyllum demersum HOM05D006149 ORTHO05D007341 3.6e-14 82.4 92 55.4
Thecc.02G107700 Theobroma cacao HOM05D006149 ORTHO05D007341 3.6e-14 82.4 107 47.7
unitig_22.g5723 Utricularia gibba HOM05D006149 ORTHO05D007341 3.6e-14 82.4 82 56.1
Rhsim05G0088300 Rhododendron simsii HOM05D006149 ORTHO05D007341 4.8e-14 82.0 82 54.9
Oeu017469.1 Olea europaea HOM05D006149 ORTHO05D007341 6.2e-14 81.6 77 57.1
Lj9A321G81 Lonicera japonica HOM05D006149 ORTHO05D007341 8.1e-14 81.3 81 55.6
Medtr1g107435 Medicago truncatula HOM05D006149 ORTHO05D007341 8.1e-14 81.3 80 55.0
vmacro19450 Vaccinium macrocarpon HOM05D006149 ORTHO05D007341 8.1e-14 81.3 81 54.3
Aa31LG8G13110 Aethionema arabicum HOM05D006149 ORTHO05D007341 1.4e-13 80.5 81 54.3
ATR0618G054 Amborella trichopoda HOM05D006149 ORTHO05D007341 1.8e-13 80.1 95 49.5
Sabra09G0073900 Salix brachista HOM05D006149 ORTHO05D007341 1.8e-13 80.1 92 50.0
SHI05287 Sapria himalayana HOM05D006149 ORTHO05D007341 1.8e-13 80.1 80 53.8
ECA240G2462 Erigeron canadensis HOM05D006149 ORTHO05D007341 2.4e-13 79.7 80 53.8
Sc08g0001390 Simmondsia chinensis HOM05D006149 ORTHO05D007341 2.4e-13 79.7 114 43.9
Lsat_1_v5_gn_9_111221 Lactuca sativa HOM05D006149 ORTHO05D007341 3.1e-13 79.3 96 50.0
TWI32G0763 Tripterygium wilfordii HOM05D006149 ORTHO05D007341 3.1e-13 79.3 87 55.2
Gohir.D02G207100 Gossypium hirsutum HOM05D006149 ORTHO05D007341 4.0e-13 79.0 103 48.5
Gorai.005G235000 Gossypium raimondii HOM05D006149 ORTHO05D007341 4.0e-13 79.0 103 48.5
BcaC06g36046 Brassica carinata HOM05D006149 ORTHO05D007341 5.3e-13 78.6 82 53.7
PSO675G5876 Papaver somniferum HOM05D006149 ORTHO05D007341 5.3e-13 78.6 79 53.2
SMO364G0740 Selaginella moellendorffii HOM05D006149 ORTHO05D007341 5.3e-13 78.6 105 46.7
BcaC04g22139 Brassica carinata HOM05D006149 ORTHO05D007341 6.9e-13 78.2 82 53.7
C07p08530 Brassica napus HOM05D006149 ORTHO05D007341 6.9e-13 78.2 82 53.7
BolC7t41265H Brassica oleracea HOM05D006149 ORTHO05D007341 6.9e-13 78.2 82 53.7
AUR62039082 Chenopodium quinoa HOM05D006149 ORTHO05D007341 6.9e-13 78.2 81 51.9
BcaB03g16271 Brassica carinata HOM05D006149 ORTHO05D007341 9.0e-13 77.8 82 53.7
Zm00001eb020500 Zea mays HOM05D006149 ORTHO05D007341 9.0e-13 77.8 122 41.8
CSS0036049 Camellia sinensis var. sinensis HOM05D006149 ORTHO05D007341 1.2e-12 77.4 95 48.4
PGR142G0815 Punica granatum HOM05D006149 ORTHO05D007341 1.2e-12 77.4 108 46.3
Zm00001eb393310 Zea mays HOM05D006149 ORTHO05D007341 1.2e-12 77.4 121 42.1
SEGI_00829 Sequoiadendron giganteum HOM05D006149 ORTHO05D007341 1.5e-12 77.0 90 47.8
CBR_g44544 Chara braunii HOM05D006149 ORTHO05D007341 2.0e-12 76.6 83 53.0
FAN20G0990 Fragaria x ananassa HOM05D006149 ORTHO05D007341 2.0e-12 76.6 79 57.0
Mapoly0056s0071 Marchantia polymorpha HOM05D006149 ORTHO05D007341 2.0e-12 76.6 62 61.3
BcaB08g34585 Brassica carinata HOM05D006149 ORTHO05D007341 2.6e-12 76.3 95 50.5
Ciclev10029393m.g Citrus clementina HOM05D006149 ORTHO05D007341 2.6e-12 76.3 75 53.3
Eucgr.E02957 Eucalyptus grandis HOM05D006149 ORTHO05D007341 2.6e-12 76.3 95 49.5
A07p05350 Brassica napus HOM05D006149 ORTHO05D007341 3.4e-12 75.9 81 53.1
BraA07t28328Z Brassica rapa HOM05D006149 ORTHO05D007341 3.4e-12 75.9 81 53.1
CANSAT25G3711 Cannabis sativa HOM05D006149 ORTHO05D007341 3.4e-12 75.9 78 51.3
ClCG05G010280 Citrullus lanatus HOM05D006149 ORTHO05D007341 3.4e-12 75.9 111 45.9
FvH4_2g05220 Fragaria vesca HOM05D006149 ORTHO05D007341 3.4e-12 75.9 75 56.0
FAN15G1894 Fragaria x ananassa HOM05D006149 ORTHO05D007341 3.4e-12 75.9 75 56.0
FAN24G0478 Fragaria x ananassa HOM05D000289 ORTHO05D007341 3.4e-12 75.9 75 56.0
FAN27G1351 Fragaria x ananassa HOM05D000289 ORTHO05D007341 3.4e-12 75.9 75 56.0
Manes.10G076500 Manihot esculenta HOM05D006149 ORTHO05D007341 3.4e-12 75.9 75 54.7
RcHm_v2.0_Chr6g0255351 Rosa chinensis HOM05D006149 ORTHO05D007341 3.4e-12 75.9 75 56.0
PSO541G1364 Papaver somniferum HOM05D006149 ORTHO05D007341 4.5e-12 75.5 77 53.2
Potri.001G300300 Populus trichocarpa HOM05D006149 ORTHO05D007341 4.5e-12 75.5 89 49.4
Sed0008540 Sechium edule HOM05D006149 ORTHO05D007341 5.8e-12 75.1 75 54.7
Nitab4.5_0002815g0010 Nicotiana tabacum HOM05D006149 ORTHO05D007341 7.6e-12 74.7 111 45.9
Glyma.10G262200 Glycine max HOM05D006149 ORTHO05D007341 9.9e-12 74.3 89 50.6
Nitab4.5_0005392g0090 Nicotiana tabacum HOM05D006149 ORTHO05D007341 9.9e-12 74.3 111 45.9
Actinidia27971 Actinidia chinensis HOM05D006149 ORTHO05D007341 1.3e-11 73.9 59 61.0
CiPaw.05G011400 Carya illinoinensis HOM05D006149 ORTHO05D007341 1.3e-11 73.9 59 59.3
Aqoxy3G02908 Aquilegia oxysepala HOM05D006149 ORTHO05D007341 2.2e-11 73.2 90 47.8
AT2G15270 Arabidopsis thaliana HOM05D006149 ORTHO05D007341 2.2e-11 73.2 78 51.3
Prupe.8G134800 Prunus persica HOM05D006149 ORTHO05D007341 2.2e-11 73.2 59 61.0
CAN.G1231.7 Capsicum annuum HOM05D006149 ORTHO05D007341 2.9e-11 72.8 74 54.1
HanXRQChr02g0033021 Helianthus annuus HOM05D006149 ORTHO05D007341 2.9e-11 72.8 59 61.0
MD05G1089500 Malus domestica HOM05D006149 ORTHO05D007341 2.9e-11 72.8 59 59.3
Peaxi162Scf00016g02334 Petunia axillaris HOM05D006149 ORTHO05D007341 2.9e-11 72.8 59 59.3
Pp3c1_15220 Physcomitrium patens HOM05D006149 ORTHO05D007341 2.9e-11 72.8 99 44.4
CARHR105640 Cardamine hirsuta HOM05D006149 ORTHO05D007341 3.8e-11 72.4 79 51.9
Psat6g219120 Pisum sativum HOM05D006149 ORTHO05D007341 4.9e-11 72.0 75 52.0
Solyc01g107610.4 Solanum lycopersicum HOM05D006149 ORTHO05D007341 6.4e-11 71.6 59 59.3
Sopen01g049800 Solanum pennellii HOM05D006149 ORTHO05D007341 6.4e-11 71.6 59 59.3
PGSC0003DMG400025768 Solanum tuberosum HOM05D006149 ORTHO05D007341 6.4e-11 71.6 59 59.3
Lalb_Chr21g0308351 Lupinus albus HOM05D006149 ORTHO05D007341 8.4e-11 71.2 59 57.6
Carub.0003s2910 Capsella rubella HOM05D006149 ORTHO05D007341 1.4e-10 70.5 81 50.6
AUR62010304 Chenopodium quinoa HOM05D006149 ORTHO05D007341 1.4e-10 70.5 59 57.6
CANSAT25G0333 Cannabis sativa HOM05D006149 ORTHO05D007341 2.4e-10 69.7 59 55.9
Duzib248G1531 Durio zibethinus HOM05D006149 ORTHO05D007341 6.0e-09 65.1 104 43.3
QL11p033743 Quercus lobata HOM05D006149 ORTHO05D007341 7.9e-09 64.7 115 39.1
DCAR_001643 Daucus carota HOM05D006149 ORTHO05D007341 2.3e-08 63.2 87 44.8
MD05G1088900 Malus domestica HOM05D006149 ORTHO05D007341 5.1e-08 62.0 128 35.2
Rhsim11G0160200 Rhododendron simsii HOM05D006149 ORTHO05D007341 6.7e-08 61.6 162 33.3
vmacro02004 Vaccinium macrocarpon HOM05D006149 ORTHO05D007341 1.1e-07 60.8 132 34.1
PGR042G0697 Punica granatum HOM05D006149 ORTHO05D007341 5.6e-07 58.5 80 43.8
MCO08G345 Micromonas commoda HOM05D006149 ORTHO05D007341 3.7e-06 55.8 89 39.3
Sabra16G0188500 Salix brachista HOM05D006149 ORTHO05D007341 8.1e-06 54.7 117 34.2


User provided reference genes

Program Settings