Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cre03.g169200 Chlamydomonas reinhardtii HOM05D007031 ORTHO05D008815 2.8e-97 358.6 178 100.0
Actinidia14432 Actinidia chinensis HOM05D007031 ORTHO05D008815 9.1e-24 114.4 123 45.5
Glyma.11G032300 Glycine max HOM05D007031 ORTHO05D008815 1.2e-23 114.0 121 43.8
Solyc08g007380.4 Solanum lycopersicum HOM05D007031 ORTHO05D008815 1.2e-23 114.0 119 43.7
Sopen08g003330 Solanum pennellii HOM05D007031 ORTHO05D008815 1.2e-23 114.0 119 43.7
Os04g0535400 Oryza sativa ssp. japonica HOM05D007031 ORTHO05D008815 4.5e-23 112.1 136 44.1
Phvul.002G062701 Phaseolus vulgaris HOM05D007031 ORTHO05D008815 4.5e-23 112.1 118 44.1
MSTRG.13772 Avicennia marina HOM05D007031 ORTHO05D008815 5.9e-23 111.7 118 43.2
PSO724G0679 Papaver somniferum HOM05D007031 ORTHO05D008815 5.9e-23 111.7 127 42.5
CANSAT21G0077 Cannabis sativa HOM05D007031 ORTHO05D008815 1.3e-22 110.5 120 43.3
Duzib205G0920 Durio zibethinus HOM05D007031 ORTHO05D008815 1.3e-22 110.5 118 44.9
Lalb_Chr09g0324411 Lupinus albus HOM05D007031 ORTHO05D008815 1.3e-22 110.5 115 44.3
arahy.Tifrunner.gnm1.ann1.R85P7C Arachis hypogaea HOM05D007031 ORTHO05D008815 1.7e-22 110.2 115 45.2
CAN.G1227.14 Capsicum annuum HOM05D007031 ORTHO05D008815 2.2e-22 109.8 121 42.1
FAN13G0327 Fragaria x ananassa HOM05D007031 ORTHO05D008815 2.2e-22 109.8 118 41.5
Aqoxy5G01014 Aquilegia oxysepala HOM05D007031 ORTHO05D008815 2.9e-22 109.4 118 44.9
AL7G38260 Arabidopsis lyrata HOM05D007031 ORTHO05D008815 2.9e-22 109.4 114 45.6
arahy.Tifrunner.gnm1.ann1.WL6NYT Arachis hypogaea HOM05D007031 ORTHO05D008815 2.9e-22 109.4 115 45.2
Cfa012711 Carpinus fangiana HOM05D007031 ORTHO05D008815 2.9e-22 109.4 133 39.1
CiPaw.12G109600 Carya illinoinensis HOM05D007031 ORTHO05D008815 2.9e-22 109.4 118 41.5
HPP92_021039 Vanilla planifolia HOM05D007031 ORTHO05D008815 2.9e-22 109.4 115 44.3
HPP92_027426 Vanilla planifolia HOM05D007031 ORTHO05D008815 2.9e-22 109.4 115 44.3
PSO386G0128 Papaver somniferum HOM05D007031 ORTHO05D008815 3.8e-22 109.0 119 44.5
Gohir.D08G188900 Gossypium hirsutum HOM05D007031 ORTHO05D008815 5.0e-22 108.6 123 41.5
Gorai.004G199000 Gossypium raimondii HOM05D007031 ORTHO05D008815 5.0e-22 108.6 123 41.5
AT4G16566 Arabidopsis thaliana HOM05D007031 ORTHO05D008815 6.5e-22 108.2 114 46.5
DCAR_027778 Daucus carota HOM05D007031 ORTHO05D008815 6.5e-22 108.2 118 43.2
FvH4_5g18810 Fragaria vesca HOM05D007031 ORTHO05D008815 6.5e-22 108.2 118 41.5
FAN18G3883 Fragaria x ananassa HOM05D007031 ORTHO05D008815 6.5e-22 108.2 118 41.5
Lj2g0002187 Lotus japonicus HOM05D007031 ORTHO05D008815 6.5e-22 108.2 115 44.3
Carub.0007s2484 Capsella rubella HOM05D007031 ORTHO05D008815 8.5e-22 107.8 114 44.7
RcHm_v2.0_Chr7g0203161 Rosa chinensis HOM05D007031 ORTHO05D008815 8.5e-22 107.8 118 41.5
TWI60G0154 Tripterygium wilfordii HOM05D007031 ORTHO05D008815 8.5e-22 107.8 118 42.4
Migut.E00966 Erythranthe guttata HOM05D007031 ORTHO05D008815 1.4e-21 107.1 114 43.9
Migut.E01683 Erythranthe guttata HOM05D007031 ORTHO05D008815 1.4e-21 107.1 114 43.9
Potri.003G076400 Populus trichocarpa HOM05D007031 ORTHO05D008815 1.4e-21 107.1 118 43.2
FAN08G1843 Fragaria x ananassa HOM05D007031 ORTHO05D008815 1.9e-21 106.7 118 40.7
Psat2g177560 Pisum sativum HOM05D007031 ORTHO05D008815 1.9e-21 106.7 115 41.7
SMO274G0074 Selaginella moellendorffii HOM05D007031 ORTHO05D008815 1.9e-21 106.7 132 40.9
Thhalv10026497m.g Eutrema salsugineum HOM05D007031 ORTHO05D008815 2.5e-21 106.3 114 45.6
Cc08_g12500 Coffea canephora HOM05D007031 ORTHO05D008815 4.2e-21 105.5 135 39.3
Lsat_1_v5_gn_5_187960 Lactuca sativa HOM05D007031 ORTHO05D008815 4.2e-21 105.5 116 42.2
Aa31LG2G12690 Aethionema arabicum HOM05D007031 ORTHO05D008815 1.2e-20 104.0 114 43.9
CARHR223050 Cardamine hirsuta HOM05D007031 ORTHO05D008815 1.2e-20 104.0 118 42.4
THA.LOC104815489 Tarenaya hassleriana HOM05D007031 ORTHO05D008815 1.2e-20 104.0 116 44.0
ATR0317G125 Amborella trichopoda HOM05D007031 ORTHO05D008815 1.6e-20 103.6 118 41.5
Dinv21635 Davidia involucrata HOM05D007031 ORTHO05D008815 1.6e-20 103.6 118 42.4
Peaxi162Scf00102g01143 Petunia axillaris HOM05D007031 ORTHO05D008815 1.6e-20 103.6 95 49.5
unitig_699.g19776 Utricularia gibba HOM05D007031 ORTHO05D008815 2.1e-20 103.2 137 38.7
CSS0040909 Camellia sinensis var. sinensis HOM05D007031 ORTHO05D008815 2.7e-20 102.8 130 42.3
TPR.G25905 Trifolium pratense HOM05D007031 ORTHO05D008815 2.7e-20 102.8 116 44.0
Ciclev10022693m.g Citrus clementina HOM05D007031 ORTHO05D008815 4.7e-20 102.1 122 41.0
Eucgr.E00427 Eucalyptus grandis HOM05D007031 ORTHO05D008815 6.1e-20 101.7 118 42.4
VMungo1215G1202 Vigna mungo HOM05D007031 ORTHO05D008815 6.1e-20 101.7 110 44.5
ECA232G3888 Erigeron canadensis HOM05D007031 ORTHO05D008815 7.9e-20 101.3 115 42.6
BcaC09g50373 Brassica carinata HOM05D007031 ORTHO05D008815 1.0e-19 100.9 119 42.9
BcaNung00171 Brassica carinata HOM05D007031 ORTHO05D008815 1.8e-19 100.1 115 42.6
CDE09G0628 Ceratophyllum demersum HOM05D005321 ORTHO05D006360 1.8e-19 100.1 114 42.1
Lj2A217G30 Lonicera japonica HOM05D007031 ORTHO05D008815 1.8e-19 100.1 125 40.0
Manes.02G039100 Manihot esculenta HOM05D007031 ORTHO05D008815 5.1e-19 98.6 110 43.6
Sed0003740 Sechium edule HOM05D007031 ORTHO05D008815 5.1e-19 98.6 118 41.5
AL7G38210 Arabidopsis lyrata HOM05D007031 ORTHO05D008815 8.8e-19 97.8 98 45.9
MD04G1063700 Malus domestica HOM05D007031 ORTHO05D008815 8.8e-19 97.8 107 42.1
SEGI_08804 Sequoiadendron giganteum HOM05D007031 ORTHO05D008815 8.8e-19 97.8 121 38.0
TAR636G3191 Trochodendron aralioides HOM05D007031 ORTHO05D008815 8.8e-19 97.8 118 40.7
Hma1.2p1_0316F.1_g123210 Hydrangea macrophylla HOM05D007031 ORTHO05D008815 1.5e-18 97.1 97 45.4
Pp3c5_26880 Physcomitrium patens HOM05D007031 ORTHO05D008815 1.5e-18 97.1 132 38.6
BolC1t02559H Brassica oleracea HOM05D007031 ORTHO05D008815 3.3e-18 95.9 120 41.7
Atru.chr9.1322 Acer truncatum HOM05D007031 ORTHO05D008815 4.4e-18 95.5 99 45.5
Gohir.A08G170700 Gossypium hirsutum HOM05D007031 ORTHO05D008815 4.4e-18 95.5 127 42.5
AUR62042788 Chenopodium quinoa HOM05D007031 ORTHO05D008815 5.7e-18 95.1 107 43.0
MCO15G691 Micromonas commoda HOM05D007031 ORTHO05D008815 5.7e-18 95.1 125 38.4
CsaV3_5G004200 Cucumis sativus L. HOM05D007031 ORTHO05D008815 1.3e-17 94.0 122 39.3
SMO134G0120 Selaginella moellendorffii HOM05D000076 ORTHO05D001279 1.7e-17 93.6 112 41.1
BraA01t02001Z Brassica rapa HOM05D007031 ORTHO05D008815 2.2e-17 93.2 120 40.8
MBI04_g09491_MAGBIO Magnolia biondii HOM05D007031 ORTHO05D008815 1.1e-16 90.9 99 43.4
CSS0002961 Camellia sinensis var. sinensis HOM05D007031 ORTHO05D008815 1.8e-16 90.1 120 41.7
Zm00001eb427450 Zea mays HOM05D007031 ORTHO05D008815 3.1e-16 89.4 80 50.0
AUR62007512 Chenopodium quinoa HOM05D007031 ORTHO05D008815 5.3e-16 88.6 99 43.4
C01p26150 Brassica napus HOM05D007031 ORTHO05D008815 6.9e-16 88.2 118 39.0
A01p20650 Brassica napus HOM05D007031 ORTHO05D008815 9.1e-16 87.8 118 39.0
ClCG01G004020 Citrullus lanatus HOM05D007031 ORTHO05D008815 1.2e-15 87.4 149 33.6
Hund14533 Selenicereus undatus HOM05D007031 ORTHO05D008815 2.0e-15 86.7 82 47.6
EL10Ac5g13074 Beta vulgaris HOM05D007031 ORTHO05D008815 5.9e-15 85.1 153 31.4
QL12p012249 Quercus lobata HOM05D007031 ORTHO05D008815 5.9e-15 85.1 84 46.4
Sabra03G0047000 Salix brachista HOM05D007031 ORTHO05D008815 5.9e-15 85.1 133 35.3
BcaNung02861 Brassica carinata HOM05D007031 ORTHO05D008815 5.5e-13 78.6 104 41.3
Pp3c6_3420 Physcomitrium patens HOM05D029721 ORTHO05D008815 5.5e-13 78.6 133 33.8
vmacro16391 Vaccinium macrocarpon HOM05D007031 ORTHO05D008815 9.4e-13 77.8 84 46.4
FAN14G5160 Fragaria x ananassa HOM05D007031 ORTHO05D008815 6.1e-12 75.1 122 34.4
Nn6g33971 Nelumbo nucifera HOM05D007031 ORTHO05D008815 8.0e-12 74.7 62 54.8
MELO3C005535.2 Cucumis melo HOM05D007031 ORTHO05D008815 1.0e-11 74.3 85 45.9
BolC7t45328H Brassica oleracea HOM05D007031 ORTHO05D008815 1.8e-11 73.6 106 40.6
CiPaw.11G153700 Carya illinoinensis HOM05D007031 ORTHO05D008815 3.0e-11 72.8 84 39.3
Sp7g15180 Schrenkiella parvula HOM05D007031 ORTHO05D008815 3.9e-11 72.4 113 35.4
FAN04G1478 Fragaria x ananassa HOM05D007031 ORTHO05D008815 5.2e-11 72.0 60 50.0
SalBow6G3941 Salvia bowleyana HOM05D007031 ORTHO05D008815 1.1e-10 70.9 100 36.0
Nitab4.5_0000712g0190 Nicotiana tabacum HOM05D007031 ORTHO05D008815 2.6e-10 69.7 105 38.1
CSS0026472 Camellia sinensis var. sinensis HOM05D007031 ORTHO05D008815 1.3e-09 67.4 59 52.5
FAN02G0786 Fragaria x ananassa HOM05D007031 ORTHO05D008815 3.7e-09 65.9 98 36.7
BcaC06g33496 Brassica carinata HOM05D007031 ORTHO05D008815 8.2e-09 64.7 91 40.7
THA.LOC104815507 Tarenaya hassleriana HOM05D007031 ORTHO05D008815 8.2e-09 64.7 52 57.7
A03p50000 Brassica napus HOM05D007337 ORTHO05D004972 1.4e-08 63.9 106 35.8
C07p48030 Brassica napus HOM05D007337 ORTHO05D004972 7.0e-08 61.6 73 45.2
Oeu062969.1 Olea europaea HOM05D007031 ORTHO05D008815 4.5e-07 58.9 115 29.6
Sc22g0000840 Simmondsia chinensis HOM05D007031 ORTHO05D008815 4.5e-07 58.9 85 34.1
Haze_07923 Corylus avellana HOM05D007031 ORTHO05D008815 7.7e-07 58.2 52 46.2
Prupe.5G068700 Prunus persica HOM05D007031 ORTHO05D008815 2.9e-06 56.2 76 38.2


User provided reference genes

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