Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cre03.g168600 Chlamydomonas reinhardtii HOM05D005484 ORTHO05D006761 3.1e-79 298.5 164 100.0
Mapoly0034s0035 Marchantia polymorpha HOM05D005484 ORTHO05D006761 1.3e-08 63.9 71 43.7
Cc01_g10030 Coffea canephora HOM05D005484 ORTHO05D006761 6.4e-08 61.6 89 38.2
Sopen11g026390 Solanum pennellii HOM05D005484 ORTHO05D006761 1.1e-07 60.8 90 34.4
Nitab4.5_0000442g0140 Nicotiana tabacum HOM05D005484 ORTHO05D006761 1.9e-07 60.1 89 32.6
Phvul.005G128800 Phaseolus vulgaris HOM05D005484 ORTHO05D006761 1.9e-07 60.1 89 34.8
Solyc11g066660.3 Solanum lycopersicum HOM05D005484 ORTHO05D006761 1.9e-07 60.1 90 34.4
AagrBONN_evm.TU.Sc2ySwM_228.452 Anthoceros agrestis HOM05D005484 ORTHO05D006761 2.4e-07 59.7 68 48.5
Gohir.A09G086400 Gossypium hirsutum HOM05D005484 ORTHO05D006761 2.4e-07 59.7 66 40.9
Gohir.D09G086420 Gossypium hirsutum HOM05D005484 ORTHO05D006761 2.4e-07 59.7 66 40.9
Gorai.006G102800 Gossypium raimondii HOM05D005484 ORTHO05D006761 2.4e-07 59.7 66 40.9
Sed0014392 Sechium edule HOM05D005484 ORTHO05D006761 3.2e-07 59.3 66 45.5
AL6G33940 Arabidopsis lyrata HOM05D005484 ORTHO05D006761 4.2e-07 58.9 77 40.3
AT5G22830 Arabidopsis thaliana HOM05D005484 ORTHO05D006761 4.2e-07 58.9 77 40.3
BcaB08g36405 Brassica carinata HOM05D005484 ORTHO05D006761 4.2e-07 58.9 77 40.3
BcaC04g19603 Brassica carinata HOM05D005484 ORTHO05D006761 4.2e-07 58.9 77 40.3
A10p18190 Brassica napus HOM05D005484 ORTHO05D006761 4.2e-07 58.9 77 40.3
C09p53800 Brassica napus HOM05D005484 ORTHO05D006761 4.2e-07 58.9 77 40.3
BolC9t58255H Brassica oleracea HOM05D005484 ORTHO05D006761 4.2e-07 58.9 77 40.3
BraA10t43894Z Brassica rapa HOM05D005484 ORTHO05D006761 4.2e-07 58.9 77 40.3
CAN.G644.47 Capsicum annuum HOM05D005484 ORTHO05D006761 4.2e-07 58.9 112 31.2
ECA233G3593 Erigeron canadensis HOM05D005484 ORTHO05D006761 4.2e-07 58.9 66 43.9
Thhalv10013483m.g Eutrema salsugineum HOM05D005484 ORTHO05D006761 4.2e-07 58.9 77 40.3
HanXRQChr02g0055131 Helianthus annuus HOM05D005484 ORTHO05D006761 4.2e-07 58.9 66 43.9
Sp6g22590 Schrenkiella parvula HOM05D005484 ORTHO05D006761 4.2e-07 58.9 77 40.3
THA.LOC104799526 Tarenaya hassleriana HOM05D005484 ORTHO05D006761 4.2e-07 58.9 77 40.3
Rhsim13G0103500 Rhododendron simsii HOM05D005484 ORTHO05D006761 5.4e-07 58.5 66 42.4
Carub.0006s2055 Capsella rubella HOM05D005484 ORTHO05D006761 7.1e-07 58.2 77 39.0
CARHR190740 Cardamine hirsuta HOM05D005484 ORTHO05D006761 7.1e-07 58.2 77 39.0
MELO3C004840.2 Cucumis melo HOM05D005484 ORTHO05D006761 7.1e-07 58.2 66 43.9
Migut.N02528 Erythranthe guttata HOM05D005484 ORTHO05D006761 7.1e-07 58.2 90 36.7
Sabra09G0119900 Salix brachista HOM05D005484 ORTHO05D006761 7.1e-07 58.2 84 38.1
Gohir.A13G223600 Gossypium hirsutum HOM05D005484 ORTHO05D006761 9.3e-07 57.8 81 38.3
Peaxi162Scf00150g00079 Petunia axillaris HOM05D005484 ORTHO05D006761 9.3e-07 57.8 78 37.2
SalBow3G0456 Salvia bowleyana HOM05D005484 ORTHO05D006761 9.3e-07 57.8 90 38.9
Ca_01692_v3 Cicer arietinum L. HOM05D005484 ORTHO05D006761 1.2e-06 57.4 93 35.5
Ca_30938_v3 Cicer arietinum L. HOM05D005484 ORTHO05D006761 1.2e-06 57.4 93 35.5
ClCG01G013990 Citrullus lanatus HOM05D005484 ORTHO05D006761 1.2e-06 57.4 68 45.6
ECA238G0643 Erigeron canadensis HOM05D005484 ORTHO05D006761 1.2e-06 57.4 66 42.4
RcHm_v2.0_Chr5g0055951 Rosa chinensis HOM05D005484 ORTHO05D006761 1.2e-06 57.4 78 41.0
Atru.chr3.3424 Acer truncatum HOM05D005484 ORTHO05D006761 1.6e-06 57.0 99 33.3
Aa31LG1G12880 Aethionema arabicum HOM05D005484 ORTHO05D006761 1.6e-06 57.0 66 40.9
AUR62031772 Chenopodium quinoa HOM05D005484 ORTHO05D006761 1.6e-06 57.0 67 40.3
COL.COLO4_19256 Corchorus olitorius HOM05D005484 ORTHO05D006761 1.6e-06 57.0 66 40.9
Manes.04G011000 Manihot esculenta HOM05D005484 ORTHO05D006761 1.6e-06 57.0 78 38.5
Potri.009G151400 Populus trichocarpa HOM05D005484 ORTHO05D006761 1.6e-06 57.0 78 38.5
Sc06g0008870 Simmondsia chinensis HOM05D005484 ORTHO05D006761 1.6e-06 57.0 67 41.8
Aqoxy1G01005 Aquilegia oxysepala HOM05D005484 ORTHO05D006761 2.1e-06 56.6 116 35.3
CSS0041747 Camellia sinensis var. sinensis HOM05D005484 ORTHO05D006761 2.1e-06 56.6 81 37.0
Duzib170G0418 Durio zibethinus HOM05D005484 ORTHO05D006761 2.1e-06 56.6 91 34.1
FAN11G2949 Fragaria x ananassa HOM05D005484 ORTHO05D006761 2.1e-06 56.6 78 39.7
Manes.11G155200 Manihot esculenta HOM05D005484 ORTHO05D006761 2.1e-06 56.6 87 34.5
Psat5g253880 Pisum sativum HOM05D005484 ORTHO05D006761 2.1e-06 56.6 78 38.5
vmacro03234 Vaccinium macrocarpon HOM05D005484 ORTHO05D006761 2.1e-06 56.6 100 36.0
Actinidia07200 Actinidia chinensis HOM05D005484 ORTHO05D006761 2.7e-06 56.2 66 42.4
Actinidia24166 Actinidia chinensis HOM05D005484 ORTHO05D006761 2.7e-06 56.2 66 42.4
EL10Ac9g21044 Beta vulgaris HOM05D005484 ORTHO05D006761 2.7e-06 56.2 67 40.3
Dinv29402 Davidia involucrata HOM05D005484 ORTHO05D006761 2.7e-06 56.2 50 52.0
Medtr2g084565 Medicago truncatula HOM05D005484 ORTHO05D006761 2.7e-06 56.2 93 36.6
Ah.01g016150 Amaranthus hybridus HOM05D005484 ORTHO05D006761 3.5e-06 55.8 67 40.3
FAN16G1757 Fragaria x ananassa HOM05D005484 ORTHO05D006761 3.5e-06 55.8 81 38.3
FAN25G3300 Fragaria x ananassa HOM05D005484 ORTHO05D006761 3.5e-06 55.8 78 39.7
Lj3g0024733 Lotus japonicus HOM05D005484 ORTHO05D006761 3.5e-06 55.8 109 32.1
ATR0665G031 Amborella trichopoda HOM05D005484 ORTHO05D006761 4.6e-06 55.5 66 39.4
Ciclev10028468m.g Citrus clementina HOM05D005484 ORTHO05D006761 4.6e-06 55.5 81 37.0
Lalb_Chr22g0350511 Lupinus albus HOM05D005484 ORTHO05D006761 4.6e-06 55.5 79 40.5
MD03G1131000 Malus domestica HOM05D005484 ORTHO05D006761 4.6e-06 55.5 66 42.4
MD11G1153500 Malus domestica HOM05D005484 ORTHO05D006761 4.6e-06 55.5 66 42.4
SGA_v2.0_scaffold466G52019 Striga asiatica HOM05D005484 ORTHO05D006761 4.6e-06 55.5 78 37.2
Thecc.09G294600 Theobroma cacao HOM05D005484 ORTHO05D006761 4.6e-06 55.5 91 33.0
TPR.G32384 Trifolium pratense HOM05D005484 ORTHO05D006761 4.6e-06 55.5 93 35.5
unitig_22.g6648 Utricularia gibba HOM05D005484 ORTHO05D006761 4.6e-06 55.5 99 32.3
HanXRQChr14g0451871 Helianthus annuus HOM05D005484 ORTHO05D006761 6.0e-06 55.1 118 32.2
Lsat_1_v5_gn_2_96860 Lactuca sativa HOM05D005484 ORTHO05D006761 6.0e-06 55.1 109 31.2
Lj2A998T22 Lonicera japonica HOM05D005484 ORTHO05D006761 6.0e-06 55.1 93 34.4
Cfa010112 Carpinus fangiana HOM05D005484 ORTHO05D006761 7.8e-06 54.7 66 39.4
Hma1.2p1_0864F.1_g230060 Hydrangea macrophylla HOM05D005484 ORTHO05D006761 7.8e-06 54.7 50 50.0
Lsat_1_v5_gn_6_42460 Lactuca sativa HOM05D005484 ORTHO05D006761 7.8e-06 54.7 122 32.0
TWI31G0675 Tripterygium wilfordii HOM05D005484 ORTHO05D006761 7.8e-06 54.7 90 35.6


User provided reference genes

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