Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cre03.g161500 Chlamydomonas reinhardtii HOM05D004700 ORTHO05D005576 9.1e-174 613.6 342 100.0
Phvul.011G168700 Phaseolus vulgaris HOM05D004700 ORTHO05D005576 1.0e-23 115.2 179 34.6
Gohir.A11G289500 Gossypium hirsutum HOM05D004700 ORTHO05D005576 2.3e-23 114.0 179 35.2
Gohir.D11G302900 Gossypium hirsutum HOM05D004700 ORTHO05D005576 2.3e-23 114.0 179 35.2
TPR.G16482 Trifolium pratense HOM05D004700 ORTHO05D005576 6.6e-23 112.5 179 33.0
Medtr8g054400 Medicago truncatula HOM05D004700 ORTHO05D005576 1.1e-22 111.7 179 32.4
A05p18220 Brassica napus HOM05D004700 ORTHO05D005576 1.9e-22 110.9 183 31.7
TWI38G0408 Tripterygium wilfordii HOM05D004700 ORTHO05D005576 2.5e-22 110.5 179 33.5
THA.LOC104822577 Tarenaya hassleriana HOM05D004700 ORTHO05D005576 5.6e-22 109.4 179 33.0
BcaC01g01394 Brassica carinata HOM05D004700 ORTHO05D005576 7.3e-22 109.0 179 33.5
Zm00001eb239370 Zea mays HOM05D004700 ORTHO05D005576 1.6e-21 107.8 179 34.1
BolC3t21472H Brassica oleracea HOM05D004700 ORTHO05D005576 2.8e-21 107.1 179 33.0
C03p91550 Brassica napus HOM05D004700 ORTHO05D005576 3.6e-21 106.7 179 33.0
Ca_22302_v3 Cicer arietinum L. HOM05D004700 ORTHO05D005576 6.2e-21 105.9 179 30.7
Lalb_Chr19g0133711 Lupinus albus HOM05D004700 ORTHO05D005576 3.1e-20 103.6 186 33.3
Lj3g0009226 Lotus japonicus HOM05D004700 ORTHO05D005576 4.0e-20 103.2 179 31.8
Gorai.007G331800 Gossypium raimondii HOM05D004700 ORTHO05D005576 6.8e-20 102.4 179 33.5
Thhalv10011691m.g Eutrema salsugineum HOM05D004700 ORTHO05D005576 8.9e-20 102.1 179 31.3
Sp1g40020 Schrenkiella parvula HOM05D004700 ORTHO05D005576 1.2e-19 101.7 179 31.3
Psat4g157000 Pisum sativum HOM05D004700 ORTHO05D005576 2.6e-19 100.5 179 29.6
CARHR043720 Cardamine hirsuta HOM05D004700 ORTHO05D005576 5.8e-19 99.4 179 30.7
AL1G62040 Arabidopsis lyrata HOM05D004700 ORTHO05D005576 7.6e-19 99.0 179 30.2
Carub.0001s4267 Capsella rubella HOM05D004700 ORTHO05D005576 7.6e-19 99.0 179 30.2
AT1G53490 Arabidopsis thaliana HOM05D004700 ORTHO05D005576 1.3e-18 98.2 179 30.2
Glyma.15G209600 Glycine max HOM05D004700 ORTHO05D005576 2.2e-18 97.4 179 29.6
BcaB07g33326 Brassica carinata HOM05D004700 ORTHO05D005576 4.9e-18 96.3 182 28.0
Os02g0232100 Oryza sativa ssp. japonica HOM05D004700 ORTHO05D005576 8.4e-18 95.5 179 31.8
MELO3C016116.2 Cucumis melo HOM05D004700 ORTHO05D005576 1.1e-17 95.1 132 37.9
unitig_746.g26835 Utricularia gibba HOM05D004700 ORTHO05D005576 1.1e-17 95.1 205 29.8
CANSAT56G3173 Cannabis sativa HOM05D004700 ORTHO05D005576 1.9e-17 94.4 339 28.3
Aqoxy1G01902 Aquilegia oxysepala HOM05D004700 ORTHO05D005576 3.2e-17 93.6 132 36.4
Pp3c8_15890 Physcomitrium patens HOM05D004700 ORTHO05D005576 7.1e-17 92.4 198 31.3
vmacro11972 Vaccinium macrocarpon HOM05D004700 ORTHO05D005576 7.1e-17 92.4 132 34.1
PGR031G0266 Punica granatum HOM05D004700 ORTHO05D005576 1.2e-16 91.7 126 35.7
GSVIVG01014096001 Vitis vinifera HOM05D004700 ORTHO05D005576 1.2e-16 91.7 132 36.4
Actinidia03618 Actinidia chinensis HOM05D004700 ORTHO05D005576 1.6e-16 91.3 132 35.6
Dinv13363 Davidia involucrata HOM05D004700 ORTHO05D005576 1.6e-16 91.3 126 35.7
Cc05_g10710 Coffea canephora HOM05D004700 ORTHO05D005576 2.1e-16 90.9 132 36.4
Sopen08g005940 Solanum pennellii HOM05D004700 ORTHO05D005576 2.1e-16 90.9 128 33.6
Aa31LG10G1720 Aethionema arabicum HOM05D004700 ORTHO05D005576 2.7e-16 90.5 179 29.6
Haze_09248 Corylus avellana HOM05D004700 ORTHO05D005576 2.7e-16 90.5 132 34.8
CsaV3_4G008200 Cucumis sativus L. HOM05D004700 ORTHO05D005576 2.7e-16 90.5 132 37.1
Duzib213G0278 Durio zibethinus HOM05D004700 ORTHO05D005576 2.7e-16 90.5 126 34.1
Nn6g34422 Nelumbo nucifera HOM05D004700 ORTHO05D005576 2.7e-16 90.5 132 35.6
Sed0005766 Sechium edule HOM05D004700 ORTHO05D005576 2.7e-16 90.5 132 37.1
CSS0040857 Camellia sinensis var. sinensis HOM05D004700 ORTHO05D005576 3.5e-16 90.1 126 34.1
CAN.G68.2 Capsicum annuum HOM05D004700 ORTHO05D005576 3.5e-16 90.1 128 32.0
Ciclev10016084m.g Citrus clementina HOM05D004700 ORTHO05D005576 3.5e-16 90.1 132 34.8
DCAR_013348 Daucus carota HOM05D004700 ORTHO05D005576 3.5e-16 90.1 128 35.2
Dinv26707 Davidia involucrata HOM05D004700 ORTHO05D005576 3.5e-16 90.1 126 34.9
Sed0011117 Sechium edule HOM05D004700 ORTHO05D005576 3.5e-16 90.1 132 37.9
Thecc.07G132900 Theobroma cacao HOM05D004700 ORTHO05D005576 3.5e-16 90.1 132 35.6
Atru.chr2.1968 Acer truncatum HOM05D004700 ORTHO05D005576 4.6e-16 89.7 126 34.1
CiPaw.12G110800 Carya illinoinensis HOM05D004700 ORTHO05D005576 6.0e-16 89.4 126 34.9
ECA236G3615 Erigeron canadensis HOM05D004700 ORTHO05D005576 6.0e-16 89.4 158 31.6
Manes.15G098600 Manihot esculenta HOM05D004700 ORTHO05D005576 6.0e-16 89.4 132 32.6
arahy.Tifrunner.gnm1.ann1.7PP38G Arachis hypogaea HOM05D004700 ORTHO05D005576 7.8e-16 89.0 128 34.4
CiPaw.11G155900 Carya illinoinensis HOM05D004700 ORTHO05D005576 7.8e-16 89.0 132 35.6
Manes.03G079300 Manihot esculenta HOM05D004700 ORTHO05D005576 7.8e-16 89.0 132 34.8
Mapoly0001s0250 Marchantia polymorpha HOM05D004700 ORTHO05D005576 7.8e-16 89.0 125 33.6
EL10Ac4g08417 Beta vulgaris HOM05D004700 ORTHO05D005576 1.0e-15 88.6 128 35.9
BcaB02g10917 Brassica carinata HOM05D004700 ORTHO05D005576 1.0e-15 88.6 135 32.6
Oeu050672.1 Olea europaea HOM05D004700 ORTHO05D005576 1.0e-15 88.6 132 33.3
Potri.001G383900 Populus trichocarpa HOM05D004700 ORTHO05D005576 1.0e-15 88.6 128 34.4
Prupe.4G156500 Prunus persica HOM05D004700 ORTHO05D005576 1.0e-15 88.6 132 34.8
Atru.chr2.1937 Acer truncatum HOM05D004700 ORTHO05D005576 1.3e-15 88.2 126 33.3
Eucgr.F03234 Eucalyptus grandis HOM05D004700 ORTHO05D005576 1.7e-15 87.8 132 35.6
Glyma.09G099300 Glycine max HOM05D004700 ORTHO05D005576 1.7e-15 87.8 126 33.3
Hma1.2p1_0325F.1_g125830 Hydrangea macrophylla HOM05D004700 ORTHO05D005576 1.7e-15 87.8 126 34.1
Nitab4.5_0000348g0050 Nicotiana tabacum HOM05D004700 ORTHO05D005576 1.7e-15 87.8 126 33.3
PSO675G6346 Papaver somniferum HOM05D004700 ORTHO05D005576 1.7e-15 87.8 128 34.4
ATR0602G050 Amborella trichopoda HOM05D004700 ORTHO05D005576 2.3e-15 87.4 132 33.3
AagrBONN_evm.TU.Sc2ySwM_362.885 Anthoceros agrestis HOM05D004700 ORTHO05D005576 2.3e-15 87.4 127 30.7
PSO541G3766 Papaver somniferum HOM05D004700 ORTHO05D005576 2.3e-15 87.4 132 34.8
Hund08843 Selenicereus undatus HOM05D004700 ORTHO05D005576 2.3e-15 87.4 126 34.9
Actinidia12604 Actinidia chinensis HOM05D004700 ORTHO05D005576 3.0e-15 87.0 132 34.1
QL08p024163 Quercus lobata HOM05D004700 ORTHO05D005576 3.0e-15 87.0 132 34.1
Sabra11G0081100 Salix brachista HOM05D004700 ORTHO05D005576 3.0e-15 87.0 132 34.1
SGA_v2.0_scaffold181G39765 Striga asiatica HOM05D004700 ORTHO05D005576 3.0e-15 87.0 128 32.0
Hma1.2p1_0050F.1_g028780 Hydrangea macrophylla HOM05D004700 ORTHO05D005576 3.9e-15 86.7 146 30.1
Migut.H02024 Erythranthe guttata HOM05D004700 ORTHO05D005576 5.1e-15 86.3 179 28.5
FvH4_3g17740 Fragaria vesca HOM05D004700 ORTHO05D005576 5.1e-15 86.3 117 36.8
FAN11G3801 Fragaria x ananassa HOM05D004700 ORTHO05D005576 5.1e-15 86.3 117 36.8
RcHm_v2.0_Chr5g0029521 Rosa chinensis HOM05D004700 ORTHO05D005576 5.1e-15 86.3 117 36.8
HanXRQChr15g0492381 Helianthus annuus HOM05D004700 ORTHO05D005576 6.6e-15 85.9 126 32.5
MD03G1247600 Malus domestica HOM05D004700 ORTHO05D005576 6.6e-15 85.9 132 34.8
Rhsim06G0211800 Rhododendron simsii HOM05D004700 ORTHO05D005576 6.6e-15 85.9 130 33.1
TWI38G0400 Tripterygium wilfordii HOM05D004700 ORTHO05D005576 8.7e-15 85.5 132 31.8
BcaC08g43535 Brassica carinata HOM05D004700 ORTHO05D005576 1.9e-14 84.3 147 32.0
BraA05t20718Z Brassica rapa HOM05D004700 ORTHO05D005576 1.9e-14 84.3 131 32.1
FAN16G2451 Fragaria x ananassa HOM05D004700 ORTHO05D005576 1.9e-14 84.3 117 35.9
Potri.011G104500 Populus trichocarpa HOM05D004700 ORTHO05D005576 1.9e-14 84.3 132 33.3
BraA08t32205Z Brassica rapa HOM05D004700 ORTHO05D005576 3.3e-14 83.6 182 28.0
arahy.Tifrunner.gnm1.ann1.DP9AR5 Arachis hypogaea HOM05D004700 ORTHO05D005576 1.6e-13 81.3 137 32.1
MBI06_g08516_MAGBIO Magnolia biondii HOM05D004700 ORTHO05D005576 8.1e-13 79.0 143 31.5
Sabra16G0252900 Salix brachista HOM05D004700 ORTHO05D005576 4.9e-10 69.7 153 27.5
BraA08t32208Z Brassica rapa HOM05D004700 ORTHO05D005576 8.4e-10 68.9 182 25.8
Actinidia39420 Actinidia chinensis HOM05D004700 ORTHO05D005576 1.1e-09 68.6 179 25.1
Sabra11G0075900 Salix brachista HOM05D004700 ORTHO05D005576 1.1e-09 68.6 128 30.5
Actinidia04619 Actinidia chinensis HOM05D004700 ORTHO05D005576 2.4e-09 67.4 71 36.6
A06p00990 Brassica napus HOM05D004700 ORTHO05D005576 3.2e-09 67.0 181 22.1
BraA06t23327Z Brassica rapa HOM05D004700 ORTHO05D005576 3.2e-09 67.0 181 22.1
Zm00001eb164550 Zea mays HOM05D004700 ORTHO05D005576 9.3e-09 65.5 75 38.7
MD11G1269900 Malus domestica HOM05D004700 ORTHO05D005576 2.3e-07 60.8 189 25.4
Ah.06g187690 Amaranthus hybridus HOM05D004700 ORTHO05D000031 3.0e-07 60.5 71 38.0
Zm00001eb046150 Zea mays HOM05D004700 ORTHO05D005576 6.6e-07 59.3 51 47.1
Zm00001eb352830 Zea mays HOM05D004700 ORTHO05D005576 6.6e-07 59.3 108 33.3
C06p09250 Brassica napus HOM05D004700 ORTHO05D005576 3.3e-06 57.0 172 25.0
BolC6t36002H Brassica oleracea HOM05D004700 ORTHO05D005576 3.3e-06 57.0 172 25.0
VMungo1127G0687 Vigna mungo HOM05D004700 ORTHO05D005576 5.6e-06 56.2 116 31.0


User provided reference genes

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