Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cre03.g161000 Chlamydomonas reinhardtii HOM05D005739 ORTHO05D007740 2.0e-235 818.9 481 100.0
SEGI_12484 Sequoiadendron giganteum HOM05D005739 ORTHO05D007740 3.6e-75 286.6 444 40.5
Cfa000251 Carpinus fangiana HOM05D005739 ORTHO05D007740 2.3e-74 283.9 445 40.2
MD10G1317700 Malus domestica HOM05D005739 ORTHO05D007740 1.5e-73 281.2 444 39.2
Oeu063902.1 Olea europaea HOM05D005739 ORTHO05D007740 2.2e-72 277.3 452 36.9
TAR627G1089 Trochodendron aralioides HOM05D005739 ORTHO05D007740 8.3e-72 275.4 456 38.4
RcHm_v2.0_Chr5g0003721 Rosa chinensis HOM05D005739 ORTHO05D007740 1.1e-71 275.0 452 39.2
FvH4_3g02490 Fragaria vesca HOM05D005739 ORTHO05D007740 1.4e-71 274.6 443 39.5
ATR0752G010 Amborella trichopoda HOM05D005739 ORTHO05D007740 5.4e-71 272.7 450 39.3
Nitab4.5_0007448g0040 Nicotiana tabacum HOM05D005739 ORTHO05D007740 5.4e-71 272.7 432 38.7
SalBow8G1417 Salvia bowleyana HOM05D005739 ORTHO05D007740 5.4e-71 272.7 454 38.3
PSO210G3635 Papaver somniferum HOM05D005739 ORTHO05D007740 7.0e-71 272.3 452 39.2
EL10Ac8g20019 Beta vulgaris HOM05D005739 ORTHO05D007740 9.2e-71 271.9 451 40.6
PSO832G4144 Papaver somniferum HOM05D005739 ORTHO05D007740 9.2e-71 271.9 452 38.9
QL05p074082 Quercus lobata HOM05D005739 ORTHO05D007740 3.5e-70 270.0 453 38.2
Ciclev10015698m.g Citrus clementina HOM05D005739 ORTHO05D007740 5.9e-70 269.2 450 37.3
CDE11G0579 Ceratophyllum demersum HOM05D005739 ORTHO05D007740 7.8e-70 268.9 446 38.1
COL.COLO4_31742 Corchorus olitorius HOM05D005739 ORTHO05D007740 7.8e-70 268.9 456 37.1
ECA234G0122 Erigeron canadensis HOM05D005739 ORTHO05D007740 7.8e-70 268.9 452 37.6
MSTRG.15974 Avicennia marina HOM05D005739 ORTHO05D007740 1.3e-69 268.1 452 37.2
Peaxi162Scf00203g01110 Petunia axillaris HOM05D005739 ORTHO05D007740 1.3e-69 268.1 443 38.6
Psat4g007680 Pisum sativum HOM05D005739 ORTHO05D007740 1.3e-69 268.1 455 39.3
Glyma.13G206500 Glycine max HOM05D005739 ORTHO05D007740 1.7e-69 267.7 445 39.1
PGR004G1404 Punica granatum HOM05D005739 ORTHO05D007740 1.7e-69 267.7 451 37.0
Lj6g0027190 Lotus japonicus HOM05D005739 ORTHO05D007740 2.3e-69 267.3 444 39.2
Thecc.06G217300 Theobroma cacao HOM05D005739 ORTHO05D007740 2.3e-69 267.3 446 37.0
TWI38G1065 Tripterygium wilfordii HOM05D005739 ORTHO05D007740 2.3e-69 267.3 443 38.1
VMungo1215G0361 Vigna mungo HOM05D005739 ORTHO05D007740 2.3e-69 267.3 445 39.3
Cc09_g01940 Coffea canephora HOM05D005739 ORTHO05D007740 5.0e-69 266.2 452 37.2
FAN25G0806 Fragaria x ananassa HOM05D005739 ORTHO05D007740 5.0e-69 266.2 443 38.6
Actinidia11847 Actinidia chinensis HOM05D005739 ORTHO05D007740 6.6e-69 265.8 451 38.4
Duzib235G0413 Durio zibethinus HOM05D005739 ORTHO05D007740 8.6e-69 265.4 444 36.7
Phvul.003G077000 Phaseolus vulgaris HOM05D005739 ORTHO05D007740 8.6e-69 265.4 455 38.5
Nn1g03584 Nelumbo nucifera HOM05D005739 ORTHO05D007740 1.1e-68 265.0 442 37.6
Os07g0661000 Oryza sativa ssp. japonica HOM05D005739 ORTHO05D007740 1.1e-68 265.0 456 37.7
Haze_06773 Corylus avellana HOM05D005739 ORTHO05D007740 1.5e-68 264.6 415 39.8
Lsat_1_v5_gn_4_60101 Lactuca sativa HOM05D005739 ORTHO05D007740 1.5e-68 264.6 432 38.7
Phvul.006G151100 Phaseolus vulgaris HOM05D005739 ORTHO05D007740 1.5e-68 264.6 444 38.5
PGSC0003DMG400011257 Solanum tuberosum HOM05D005739 ORTHO05D007740 1.5e-68 264.6 443 37.2
CsaV3_6G049150 Cucumis sativus L. HOM05D005739 ORTHO05D007740 1.9e-68 264.2 446 36.8
TPR.G37091 Trifolium pratense HOM05D005739 ORTHO05D007740 1.9e-68 264.2 455 38.9
arahy.Tifrunner.gnm1.ann1.HAY2RB Arachis hypogaea HOM05D005739 ORTHO05D007740 2.5e-68 263.8 455 37.6
DCAR_008137 Daucus carota HOM05D005739 ORTHO05D007740 2.5e-68 263.8 443 37.5
AagrBONN_evm.TU.Sc2ySwM_368.535 Anthoceros agrestis HOM05D005739 ORTHO05D007740 3.3e-68 263.5 449 39.4
Glyma.15G106200 Glycine max HOM05D005739 ORTHO05D007740 3.3e-68 263.5 446 38.8
Gohir.D06G153000 Gossypium hirsutum HOM05D005739 ORTHO05D007740 3.3e-68 263.5 449 36.5
VMungo0540G2038 Vigna mungo HOM05D005739 ORTHO05D007740 3.3e-68 263.5 445 38.4
Solyc10g005310.3 Solanum lycopersicum HOM05D005739 ORTHO05D007740 4.3e-68 263.1 443 36.8
CARHR252690 Cardamine hirsuta HOM05D005739 ORTHO05D007740 7.3e-68 262.3 441 37.6
Glyma.07G258900 Glycine max HOM05D005739 ORTHO05D007740 7.3e-68 262.3 442 39.1
Gorai.010G179000 Gossypium raimondii HOM05D005739 ORTHO05D007740 7.3e-68 262.3 449 36.5
arahy.Tifrunner.gnm1.ann1.GPHX1M Arachis hypogaea HOM05D005739 ORTHO05D007740 1.2e-67 261.5 455 37.4
MELO3C007380.2 Cucumis melo HOM05D005739 ORTHO05D007740 1.2e-67 261.5 446 36.5
Lalb_Chr20g0118561 Lupinus albus HOM05D005739 ORTHO05D007740 1.2e-67 261.5 447 38.9
Atru.chr10.2176 Acer truncatum HOM05D005739 ORTHO05D007740 1.6e-67 261.2 452 36.9
Eucgr.D01304 Eucalyptus grandis HOM05D005739 ORTHO05D007740 1.6e-67 261.2 451 36.8
Zm00001eb110820 Zea mays HOM05D005739 ORTHO05D007740 1.6e-67 261.2 451 37.0
Ca_21095_v3 Cicer arietinum L. HOM05D005739 ORTHO05D007740 2.1e-67 260.8 455 38.7
Ca_30203_v3 Cicer arietinum L. HOM05D005739 ORTHO05D007740 2.1e-67 260.8 455 38.7
HanXRQChr16g0515931 Helianthus annuus HOM05D005739 ORTHO05D007740 2.1e-67 260.8 443 37.0
CSS0045804 Camellia sinensis var. sinensis HOM05D005739 ORTHO05D007740 2.8e-67 260.4 452 38.1
Dinv13869 Davidia involucrata HOM05D005739 ORTHO05D007740 3.6e-67 260.0 451 38.4
Thhalv10028765m.g Eutrema salsugineum HOM05D005739 ORTHO05D007740 4.7e-67 259.6 441 37.9
vmacro15817 Vaccinium macrocarpon HOM05D005739 ORTHO05D007740 4.7e-67 259.6 460 37.2
SMO343G0036 Selaginella moellendorffii HOM05D005739 ORTHO05D007740 6.2e-67 259.2 454 38.8
Carub.0006s3279 Capsella rubella HOM05D005739 ORTHO05D007740 8.0e-67 258.8 441 38.3
AT4G04880 Arabidopsis thaliana HOM05D005739 ORTHO05D007740 1.8e-66 257.7 443 38.1
GSVIVG01012654001 Vitis vinifera HOM05D005739 ORTHO05D007740 1.8e-66 257.7 452 36.9
Potri.011G000100 Populus trichocarpa HOM05D005739 ORTHO05D007740 2.3e-66 257.3 441 37.6
Rhsim02G0110500 Rhododendron simsii HOM05D005739 ORTHO05D007740 2.3e-66 257.3 460 36.3
Migut.M01296 Erythranthe guttata HOM05D005739 ORTHO05D007740 5.2e-66 256.1 454 34.8
Sp6g04100 Schrenkiella parvula HOM05D005739 ORTHO05D007740 6.8e-66 255.8 441 36.7
AL6G48370 Arabidopsis lyrata HOM05D005739 ORTHO05D007740 8.9e-66 255.4 440 37.5
Sabra11G0000600 Salix brachista HOM05D005739 ORTHO05D007740 8.9e-66 255.4 441 37.4
SGA_v2.0_scaffold4G01929 Striga asiatica HOM05D005739 ORTHO05D007740 1.2e-65 255.0 459 36.4
BraA09t38171Z Brassica rapa HOM05D005739 ORTHO05D007740 2.6e-65 253.8 440 37.3
A09p26050 Brassica napus HOM05D005739 ORTHO05D007740 4.4e-65 253.1 440 37.3
Hma1.2p1_0813F.1_g222580 Hydrangea macrophylla HOM05D005739 ORTHO05D007740 4.4e-65 253.1 444 37.6
BcaC04g21334 Brassica carinata HOM05D005739 ORTHO05D007740 5.8e-65 252.7 440 37.0
BolC9t56140H Brassica oleracea HOM05D005739 ORTHO05D007740 7.5e-65 252.3 440 37.0
Mapoly0023s0135 Marchantia polymorpha HOM05D005739 ORTHO05D007740 7.5e-65 252.3 438 38.4
Sed0020639 Sechium edule HOM05D005739 ORTHO05D007740 2.9e-64 250.4 446 35.7
Sed0022137 Sechium edule HOM05D005739 ORTHO05D007740 2.9e-64 250.4 448 35.9
Ca_00625_v3 Cicer arietinum L. HOM05D005739 ORTHO05D007740 6.4e-64 249.2 447 37.4
unitig_92.g28118 Utricularia gibba HOM05D005739 ORTHO05D007740 5.4e-63 246.1 399 39.3
HPP92_016316 Vanilla planifolia HOM05D005739 ORTHO05D007740 7.0e-63 245.7 454 36.6
C09p33050 Brassica napus HOM05D005739 ORTHO05D007740 1.2e-62 245.0 414 37.7
TPR.G7643 Trifolium pratense HOM05D005739 ORTHO05D007740 2.7e-62 243.8 445 35.3
Psat1g181440 Pisum sativum HOM05D005739 ORTHO05D007740 6.0e-62 242.7 448 35.5
BcaB01g01842 Brassica carinata HOM05D005739 ORTHO05D007740 1.0e-61 241.9 440 35.7
Cpa.g.sc198.24 Carica papaya HOM05D005739 ORTHO05D007740 1.0e-61 241.9 416 37.5
AUR62012674 Chenopodium quinoa HOM05D005739 ORTHO05D007740 1.0e-61 241.9 451 36.6
Medtr2g022780 Medicago truncatula HOM05D005739 ORTHO05D007740 1.0e-61 241.9 448 36.6
ClCG01G022090 Citrullus lanatus HOM05D005739 ORTHO05D007740 1.7e-61 241.1 445 35.5
Ah.14g088100 Amaranthus hybridus HOM05D005739 ORTHO05D007740 3.0e-61 240.4 523 33.7
THA.LOC104812968 Tarenaya hassleriana HOM05D005739 ORTHO05D007740 3.0e-61 240.4 403 37.0
Aa31LG9G9620 Aethionema arabicum HOM05D005739 ORTHO05D007740 8.6e-61 238.8 464 35.1
Medtr4g131840 Medicago truncatula HOM05D005739 ORTHO05D007740 1.1e-60 238.4 401 39.7
Gohir.A06G147200 Gossypium hirsutum HOM05D005739 ORTHO05D007740 1.6e-59 234.6 412 35.7
Manes.16G010200 Manihot esculenta HOM05D005739 ORTHO05D007740 4.7e-59 233.0 406 37.7
Lj1C1227G9 Lonicera japonica HOM05D005739 ORTHO05D007740 8.1e-59 232.3 451 35.9
MBI18_g35070_MAGBIO Magnolia biondii HOM05D005739 ORTHO05D007740 5.2e-58 229.6 396 36.4
AUR62021982 Chenopodium quinoa HOM05D005739 ORTHO05D007740 1.4e-55 221.5 507 33.5
Nitab4.5_0002155g0060 Nicotiana tabacum HOM05D005739 ORTHO05D007740 4.6e-54 216.5 492 32.9
Sc06g0010750 Simmondsia chinensis HOM05D005739 ORTHO05D007740 3.3e-52 210.3 389 36.0
CANSAT56G1696 Cannabis sativa HOM05D005739 ORTHO05D007740 2.1e-51 207.6 381 35.7
HPP92_016297 Vanilla planifolia HOM05D005739 ORTHO05D007740 1.8e-50 204.5 451 32.6
Pp3c11_7970 Physcomitrium patens HOM05D005739 ORTHO05D007740 4.0e-50 203.4 397 34.0
Hund23487 Selenicereus undatus HOM05D005739 ORTHO05D007740 5.2e-50 203.0 419 35.6
CiPaw.10G069300 Carya illinoinensis HOM05D005739 ORTHO05D007740 8.9e-50 202.2 377 35.5
Sopen10g001300 Solanum pennellii HOM05D005739 ORTHO05D007740 7.6e-49 199.1 216 48.1
MCO11G903 Micromonas commoda HOM05D005739 ORTHO05D007740 9.9e-49 198.7 452 34.7
CAN.G105.13 Capsicum annuum HOM05D005739 ORTHO05D007740 2.9e-48 197.2 214 48.6
Prupe.4G024100 Prunus persica HOM05D005739 ORTHO05D007740 8.6e-45 185.7 365 35.1
Dinv17816 Davidia involucrata HOM05D005739 ORTHO05D007740 2.0e-41 174.5 356 35.7
Aqoxy1G03635 Aquilegia oxysepala HOM05D005739 ORTHO05D007740 1.1e-39 168.7 361 33.2
Dinv20033 Davidia involucrata HOM05D005739 ORTHO05D007740 1.6e-38 164.9 395 31.9
arahy.Tifrunner.gnm1.ann1.Q9UH73 Arachis hypogaea HOM05D005739 ORTHO05D007740 1.6e-22 111.7 117 47.9
arahy.Tifrunner.gnm1.ann1.H0U1UD Arachis hypogaea HOM05D005739 ORTHO05D007740 2.5e-20 104.4 117 45.3
CANSAT64G1767 Cannabis sativa HOM05D005739 ORTHO05D033954 1.5e-17 95.1 104 49.0
arahy.Tifrunner.gnm1.ann1.53BRPK Arachis hypogaea HOM05D005739 ORTHO05D007740 7.6e-17 92.8 251 29.9
arahy.Tifrunner.gnm1.ann1.KZ0328 Arachis hypogaea HOM05D005739 ORTHO05D007740 7.4e-12 76.3 227 29.5
Ca_29425_v3 Cicer arietinum L. HOM05D005739 ORTHO05D044167 9.6e-12 75.9 168 33.9
arahy.Tifrunner.gnm1.ann1.FSQL8E Arachis hypogaea HOM05D005739 ORTHO05D007740 1.6e-11 75.1 293 26.3
arahy.Tifrunner.gnm1.ann1.0E5R4V Arachis hypogaea HOM05D005739 ORTHO05D007740 8.2e-11 72.8 227 29.5
arahy.Tifrunner.gnm1.ann1.B9PES8 Arachis hypogaea HOM05D005739 ORTHO05D007740 1.4e-10 72.0 227 28.6
CANSAT56G0563 Cannabis sativa HOM05D005739 ORTHO05D113818 3.1e-10 70.9 113 39.8
SEGI_28449 Sequoiadendron giganteum HOM05D005739 ORTHO05D033954 3.1e-10 70.9 67 52.2
arahy.Tifrunner.gnm1.ann1.AD56MI Arachis hypogaea HOM05D005739 ORTHO05D083983 1.0e-08 65.9 74 48.6
arahy.Tifrunner.gnm1.ann1.7V36PE Arachis hypogaea HOM05D005739 ORTHO05D007740 7.9e-06 56.2 294 23.8
RcHm_v2.0_Chr5g0051251 Rosa chinensis HOM05D005739 ORTHO05D033954 7.9e-06 56.2 61 45.9


User provided reference genes

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