Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cre03.g159300 Chlamydomonas reinhardtii HOM05D005489 ORTHO05D006629 1.8e-87 325.9 162 100.0
Os02g0566900 Oryza sativa ssp. japonica HOM05D005489 ORTHO05D006629 1.2e-14 84.0 127 41.7
HPP92_005944 Vanilla planifolia HOM05D005489 ORTHO05D006629 1.6e-14 83.6 128 39.1
Duzib041G0073 Durio zibethinus HOM05D005489 ORTHO05D006629 2.0e-14 83.2 126 39.7
Potri.005G171901 Populus trichocarpa HOM05D005489 ORTHO05D006629 2.0e-14 83.2 126 39.7
Gohir.A06G041000 Gossypium hirsutum HOM05D005489 ORTHO05D006629 2.7e-14 82.8 125 39.2
Gohir.D06G041900 Gossypium hirsutum HOM05D005489 ORTHO05D006629 2.7e-14 82.8 125 39.2
Gorai.010G047100 Gossypium raimondii HOM05D005489 ORTHO05D006629 2.7e-14 82.8 125 39.2
Dinv26716 Davidia involucrata HOM05D005489 ORTHO05D006629 3.5e-14 82.4 126 40.5
Zm00001eb100550 Zea mays HOM05D005489 ORTHO05D006629 3.5e-14 82.4 128 38.3
MSTRG.1486 Avicennia marina HOM05D005489 ORTHO05D006629 4.5e-14 82.0 125 39.2
Gohir.D02G082100 Gossypium hirsutum HOM05D005489 ORTHO05D006629 4.5e-14 82.0 125 38.4
Os09g0453000 Oryza sativa ssp. japonica HOM05D005489 ORTHO05D006629 4.5e-14 82.0 128 38.3
GSVIVG01008943001 Vitis vinifera HOM05D005489 ORTHO05D006629 4.5e-14 82.0 126 40.5
Dinv27383 Davidia involucrata HOM05D005489 ORTHO05D006629 5.9e-14 81.6 126 40.5
Nn1g08538 Nelumbo nucifera HOM05D005489 ORTHO05D006629 5.9e-14 81.6 126 41.3
Nn5g27958 Nelumbo nucifera HOM05D005489 ORTHO05D006629 5.9e-14 81.6 125 41.6
PGSC0003DMG400027793 Solanum tuberosum HOM05D005489 ORTHO05D006629 5.9e-14 81.6 127 38.6
TAR197G0004 Trochodendron aralioides HOM05D005489 ORTHO05D006629 5.9e-14 81.6 126 40.5
Solyc11g013550.2 Solanum lycopersicum HOM05D005489 ORTHO05D006629 7.7e-14 81.3 127 38.6
Sopen11g008580 Solanum pennellii HOM05D005489 ORTHO05D006629 7.7e-14 81.3 127 38.6
TAR628G1556 Trochodendron aralioides HOM05D005489 ORTHO05D006629 7.7e-14 81.3 126 39.7
Thecc.08G116800 Theobroma cacao HOM05D005489 ORTHO05D006629 1.0e-13 80.9 126 39.7
TWI56G0906 Tripterygium wilfordii HOM05D005489 ORTHO05D006629 1.0e-13 80.9 125 39.2
MELO3C022783.2 Cucumis melo HOM05D005489 ORTHO05D006629 1.3e-13 80.5 126 39.7
Gohir.A01G187700 Gossypium hirsutum HOM05D005489 ORTHO05D006629 1.3e-13 80.5 125 38.4
Gohir.A02G075000 Gossypium hirsutum HOM05D005489 ORTHO05D006629 1.3e-13 80.5 125 37.6
TWI12G0464 Tripterygium wilfordii HOM05D005489 ORTHO05D006629 1.3e-13 80.5 125 40.0
Manes.18G073000 Manihot esculenta HOM05D005489 ORTHO05D006629 1.7e-13 80.1 126 39.7
Potri.002G089300 Populus trichocarpa HOM05D005489 ORTHO05D006629 1.7e-13 80.1 126 39.7
Aqoxy5G02479 Aquilegia oxysepala HOM05D005489 ORTHO05D006629 2.2e-13 79.7 126 39.7
Hma1.2p1_0221F.1_g093180 Hydrangea macrophylla HOM05D005489 ORTHO05D006629 2.9e-13 79.3 126 38.9
Zm00001eb244520 Zea mays HOM05D005489 ORTHO05D006629 2.9e-13 79.3 127 37.8
ECA232G0625 Erigeron canadensis HOM05D005489 ORTHO05D006629 3.8e-13 79.0 126 39.7
Lsat_1_v5_gn_4_135561 Lactuca sativa HOM05D005489 ORTHO05D006629 3.8e-13 79.0 126 39.7
Oeu043793.1 Olea europaea HOM05D005489 ORTHO05D006629 3.8e-13 79.0 126 37.3
Prupe.1G506000 Prunus persica HOM05D005489 ORTHO05D006629 3.8e-13 79.0 125 38.4
CDE06G1809 Ceratophyllum demersum HOM05D005489 ORTHO05D006629 5.0e-13 78.6 125 38.4
CiPaw.05G228700 Carya illinoinensis HOM05D005489 ORTHO05D006629 8.5e-13 77.8 125 39.2
HanXRQChr09g0260151 Helianthus annuus HOM05D005489 ORTHO05D006629 8.5e-13 77.8 126 38.9
SMO116G0262 Selaginella moellendorffii HOM05D005489 ORTHO05D006629 1.1e-12 77.4 130 36.9
PGR044G1289 Punica granatum HOM05D005489 ORTHO05D006629 1.5e-12 77.0 125 38.4
QL12p035283 Quercus lobata HOM05D005489 ORTHO05D006629 1.9e-12 76.6 125 39.2
PSO017G5790 Papaver somniferum HOM05D005489 ORTHO05D006629 2.5e-12 76.3 126 38.1
PSO170G3859 Papaver somniferum HOM05D005489 ORTHO05D006629 2.5e-12 76.3 126 38.1
HanXRQChr11g0326271 Helianthus annuus HOM05D005489 ORTHO05D006629 3.2e-12 75.9 126 38.1
Lj1g0000272 Lotus japonicus HOM05D005489 ORTHO05D006629 3.2e-12 75.9 124 35.5
HPP92_002297 Vanilla planifolia HOM05D005489 ORTHO05D006629 3.2e-12 75.9 127 37.0
VMungo1127G1458 Vigna mungo HOM05D005489 ORTHO05D006629 3.2e-12 75.9 124 36.3
Actinidia29431 Actinidia chinensis HOM05D005489 ORTHO05D006629 4.2e-12 75.5 129 38.8
Lalb_Chr08g0241711 Lupinus albus HOM05D005489 ORTHO05D006629 7.2e-12 74.7 124 34.7
Cre01.g042950 Chlamydomonas reinhardtii HOM05D005489 ORTHO05D006629 9.5e-12 74.3 135 33.3
CBR_g30829 Chara braunii HOM05D005489 ORTHO05D006629 1.2e-11 73.9 128 32.0
Glyma.06G108600 Glycine max HOM05D005489 ORTHO05D006629 1.2e-11 73.9 124 34.7
Phvul.011G165300 Phaseolus vulgaris HOM05D005489 ORTHO05D006629 1.6e-11 73.6 124 34.7
Lalb_Chr11g0065701 Lupinus albus HOM05D005489 ORTHO05D006629 4.7e-11 72.0 124 33.1
MBI06_g01046_MAGBIO Magnolia biondii HOM05D005489 ORTHO05D006629 8.0e-11 71.2 122 38.5
Rhsim06G0109100 Rhododendron simsii HOM05D005489 ORTHO05D006629 1.0e-10 70.9 115 39.1
AagrBONN_evm.TU.Sc2ySwM_344.2049 Anthoceros agrestis HOM05D005489 ORTHO05D006629 2.3e-10 69.7 142 31.0
Gorai.002G220400 Gossypium raimondii HOM05D005489 ORTHO05D006629 3.0e-10 69.3 114 36.8
Mapoly0004s0020 Marchantia polymorpha HOM05D005489 ORTHO05D006629 3.0e-10 69.3 121 35.5
Sc01g0001550 Simmondsia chinensis HOM05D005489 ORTHO05D006629 6.8e-10 68.2 114 36.0
Pp3c2_28270 Physcomitrium patens HOM05D005489 ORTHO05D006629 1.2e-09 67.4 130 33.1
Aa31LG6G9070 Aethionema arabicum HOM05D005489 ORTHO05D006629 1.5e-09 67.0 114 35.1
Pp3c1_10200 Physcomitrium patens HOM05D005489 ORTHO05D006629 2.0e-09 66.6 131 35.1
DCAR_014792 Daucus carota HOM05D005489 ORTHO05D006629 3.4e-09 65.9 119 33.6
Hund16821 Selenicereus undatus HOM05D005489 ORTHO05D006629 5.7e-09 65.1 114 34.2
PRCOL_00003843 Prasinoderma coloniale HOM05D005489 ORTHO05D006629 3.1e-07 59.3 130 32.3


User provided reference genes

Program Settings