Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cre03.g155800 Chlamydomonas reinhardtii HOM05D004876 ORTHO05D005488 3.7e-66 255.4 125 100.0
Mapoly0014s0200 Marchantia polymorpha HOM05D004876 ORTHO05D005488 3.4e-19 99.4 118 42.4
MCO11G196 Micromonas commoda HOM05D004876 ORTHO05D005488 4.5e-16 89.0 118 39.0
AagrBONN_evm.TU.Sc2ySwM_368.2679 Anthoceros agrestis HOM05D004876 ORTHO05D005488 5.9e-16 88.6 118 43.2
Pp3c16_8280 Physcomitrium patens HOM05D004876 ORTHO05D005488 2.2e-15 86.7 106 40.6
SEGI_18121 Sequoiadendron giganteum HOM05D004876 ORTHO05D005488 3.8e-15 85.9 101 45.5
AUR62008150 Chenopodium quinoa HOM05D004876 ORTHO05D005488 4.2e-14 82.4 148 33.1
AUR62028732 Chenopodium quinoa HOM05D004876 ORTHO05D005488 4.2e-14 82.4 148 33.1
Psat5g069360 Pisum sativum HOM05D004876 ORTHO05D005488 2.1e-13 80.1 109 41.3
MELO3C020110.2 Cucumis melo HOM05D004876 ORTHO05D005488 2.7e-13 79.7 111 37.8
CANSAT64G1352 Cannabis sativa HOM05D004876 ORTHO05D005488 3.6e-13 79.3 90 43.3
CANSAT64G2122 Cannabis sativa HOM05D004876 ORTHO05D005488 3.6e-13 79.3 90 43.3
CsaV3_5G010740 Cucumis sativus L. HOM05D004876 ORTHO05D005488 4.7e-13 79.0 111 37.8
Migut.F01232 Erythranthe guttata HOM05D004876 ORTHO05D005488 4.7e-13 79.0 111 37.8
ClCG07G004830 Citrullus lanatus HOM05D004876 ORTHO05D005488 6.1e-13 78.6 111 36.9
Lalb_Chr11g0067701 Lupinus albus HOM05D004876 ORTHO05D005488 6.1e-13 78.6 121 36.4
Os03g0114200 Oryza sativa ssp. japonica HOM05D004876 ORTHO05D005488 6.1e-13 78.6 120 35.8
TPR.G28952 Trifolium pratense HOM05D004876 ORTHO05D005488 1.0e-12 77.8 135 35.6
ATR0733G227 Amborella trichopoda HOM05D004876 ORTHO05D005488 1.4e-12 77.4 108 40.7
Sed0020097 Sechium edule HOM05D004876 ORTHO05D005488 1.4e-12 77.4 128 34.4
TPR.G13975 Trifolium pratense HOM05D004876 ORTHO05D005488 1.4e-12 77.4 109 41.3
Atru.chr12.194 Acer truncatum HOM05D004876 ORTHO05D005488 1.8e-12 77.0 111 35.1
Duzib114G0677 Durio zibethinus HOM05D004876 ORTHO05D005488 1.8e-12 77.0 90 44.4
Phvul.005G185900 Phaseolus vulgaris HOM05D004876 ORTHO05D005488 1.8e-12 77.0 106 39.6
VMungo1309G0380 Vigna mungo HOM05D004876 ORTHO05D005488 1.8e-12 77.0 106 40.6
Phvul.009G042700 Phaseolus vulgaris HOM05D004876 ORTHO05D005488 2.3e-12 76.6 106 39.6
Lj1g0004349 Lotus japonicus HOM05D004876 ORTHO05D005488 3.0e-12 76.3 106 40.6
Aa31LG3G1350 Aethionema arabicum HOM05D004876 ORTHO05D005488 5.2e-12 75.5 116 36.2
Cpa.g.sc128.23 Carica papaya HOM05D004876 ORTHO05D005488 5.2e-12 75.5 111 36.9
PGR142G2846 Punica granatum HOM05D004876 ORTHO05D005488 6.8e-12 75.1 90 43.3
TWI09G0651 Tripterygium wilfordii HOM05D004876 ORTHO05D005488 6.8e-12 75.1 105 40.0
TAR636G2293 Trochodendron aralioides HOM05D004876 ORTHO05D005488 6.8e-12 75.1 111 35.1
ATR1127G178 Amborella trichopoda HOM05D004876 ORTHO05D005488 8.8e-12 74.7 100 39.0
QL08p065087 Quercus lobata HOM05D004876 ORTHO05D005488 8.8e-12 74.7 90 42.2
Aqoxy6G02070 Aquilegia oxysepala HOM05D004876 ORTHO05D005488 1.2e-11 74.3 111 36.9
Glyma.06G141500 Glycine max HOM05D004876 ORTHO05D005488 1.2e-11 74.3 106 36.8
MBI15_g39395_MAGBIO Magnolia biondii HOM05D004876 ORTHO05D005488 1.2e-11 74.3 90 42.2
Aqoxy5G02193 Aquilegia oxysepala HOM05D004876 ORTHO05D005488 1.5e-11 73.9 90 37.8
RcHm_v2.0_Chr1g0372561 Rosa chinensis HOM05D004876 ORTHO05D005488 2.0e-11 73.6 111 36.0
Zm00001eb000910 Zea mays HOM05D004876 ORTHO05D005488 2.0e-11 73.6 112 38.4
Ca_29868_v3 Cicer arietinum L. HOM05D000260 ORTHO05D000318 2.6e-11 73.2 120 35.8
CiPaw.04G175300 Carya illinoinensis HOM05D004876 ORTHO05D005488 4.4e-11 72.4 81 44.4
Prupe.2G265600 Prunus persica HOM05D004876 ORTHO05D005488 4.4e-11 72.4 111 35.1
MD01G1169400 Malus domestica HOM05D004876 ORTHO05D005488 7.5e-11 71.6 114 33.3
CiPaw.02G093900 Carya illinoinensis HOM05D004876 ORTHO05D005488 9.8e-11 71.2 90 41.1
CiPaw.04G175400 Carya illinoinensis HOM05D004876 ORTHO05D005488 9.8e-11 71.2 90 41.1
EL10Ac5g10661 Beta vulgaris HOM05D004876 ORTHO05D005488 1.3e-10 70.9 111 34.2
Migut.A00831 Erythranthe guttata HOM05D004876 ORTHO05D005488 1.3e-10 70.9 89 41.6
Potri.019G061200 Populus trichocarpa HOM05D004876 ORTHO05D005488 1.3e-10 70.9 90 40.0
AL4G34450 Arabidopsis lyrata HOM05D004876 ORTHO05D005488 2.2e-10 70.1 103 36.9
AL4G38670 Arabidopsis lyrata HOM05D004876 ORTHO05D005488 2.2e-10 70.1 103 36.9
FAN12G2601 Fragaria x ananassa HOM05D004876 ORTHO05D005488 2.2e-10 70.1 111 35.1
CDE07G1038 Ceratophyllum demersum HOM05D004876 ORTHO05D005488 2.8e-10 69.7 101 39.6
Carub.0004s2308 Capsella rubella HOM05D004876 ORTHO05D005488 3.7e-10 69.3 94 38.3
PSO170G6098 Papaver somniferum HOM05D004876 ORTHO05D005488 3.7e-10 69.3 89 40.4
THA.LOC104824370 Tarenaya hassleriana HOM05D004876 ORTHO05D005488 3.7e-10 69.3 90 38.9
BcaB06g29175 Brassica carinata HOM05D004876 ORTHO05D005488 4.9e-10 68.9 94 38.3
A04p31160 Brassica napus HOM05D004876 ORTHO05D005488 4.9e-10 68.9 94 38.3
C04p68560 Brassica napus HOM05D004876 ORTHO05D005488 4.9e-10 68.9 94 38.3
BolC4t28355H Brassica oleracea HOM05D004876 ORTHO05D005488 4.9e-10 68.9 94 38.3
BraA04t18571Z Brassica rapa HOM05D004876 ORTHO05D005488 4.9e-10 68.9 94 38.3
CARHR135880 Cardamine hirsuta HOM05D004876 ORTHO05D005488 4.9e-10 68.9 94 38.3
FvH4_7g26120 Fragaria vesca HOM05D004876 ORTHO05D005488 4.9e-10 68.9 111 34.2
FAN10G2920 Fragaria x ananassa HOM05D004876 ORTHO05D005488 4.9e-10 68.9 111 34.2
PSO675G4155 Papaver somniferum HOM05D004876 ORTHO05D005488 4.9e-10 68.9 94 40.4
Sp4g23100 Schrenkiella parvula HOM05D004876 ORTHO05D005488 4.9e-10 68.9 99 36.4
TWI53G0120 Tripterygium wilfordii HOM05D004876 ORTHO05D005488 4.9e-10 68.9 123 34.1
HPP92_015433 Vanilla planifolia HOM05D004876 ORTHO05D005488 4.9e-10 68.9 110 37.3
Aqoxy2G01672 Aquilegia oxysepala HOM05D004876 ORTHO05D005488 6.3e-10 68.6 90 37.8
AT2G40780 Arabidopsis thaliana HOM05D004876 ORTHO05D005488 6.3e-10 68.6 89 37.1
Thhalv10017311m.g Eutrema salsugineum HOM05D004876 ORTHO05D005488 6.3e-10 68.6 89 36.0
FAN03G2458 Fragaria x ananassa HOM05D004876 ORTHO05D005488 6.3e-10 68.6 111 34.2
Sabra19G0074800 Salix brachista HOM05D004876 ORTHO05D005488 1.1e-09 67.8 81 39.5
FAN06G0183 Fragaria x ananassa HOM05D004876 ORTHO05D005488 2.4e-09 66.6 102 34.3
Nn2g10267 Nelumbo nucifera HOM05D004876 ORTHO05D005488 7.0e-09 65.1 72 41.7
Thecc.10G185000 Theobroma cacao HOM05D004876 ORTHO05D005488 9.2e-09 64.7 102 35.3
FAN17G0734 Fragaria x ananassa HOM05D004876 ORTHO05D005488 2.0e-08 63.5 103 33.0
SGA_v2.0_scaffold2G00887 Striga asiatica HOM05D004876 ORTHO05D005488 3.5e-08 62.8 102 30.4
unitig_736.g22953 Utricularia gibba HOM05D004876 ORTHO05D005488 3.5e-08 62.8 111 29.7
vmacro06902 Vaccinium macrocarpon HOM05D004876 ORTHO05D005488 5.9e-08 62.0 131 29.8
MSTRG.8381 Avicennia marina HOM05D004876 ORTHO05D005488 1.0e-07 61.2 111 29.7
Sc10g0003050 Simmondsia chinensis HOM05D004876 ORTHO05D005488 1.7e-07 60.5 82 37.8
TPR.G24790 Trifolium pratense HOM05D004876 ORTHO05D005488 3.8e-07 59.3 67 46.3
Eucgr.G03147 Eucalyptus grandis HOM05D004876 ORTHO05D005488 6.6e-07 58.5 102 33.3
Dinv21858 Davidia involucrata HOM05D004876 ORTHO05D005488 8.6e-07 58.2 102 30.4
ECA247G1702 Erigeron canadensis HOM05D004876 ORTHO05D008274 8.6e-07 58.2 107 29.9
Medtr3g093790 Medicago truncatula HOM05D004876 ORTHO05D005488 1.5e-06 57.4 111 34.2
HanXRQChr14g0460541 Helianthus annuus HOM05D004876 ORTHO05D005488 1.9e-06 57.0 111 28.8
Lsat_1_v5_gn_5_104800 Lactuca sativa HOM05D004876 ORTHO05D005488 2.5e-06 56.6 107 29.0
Lj8A52T23 Lonicera japonica HOM05D004876 ORTHO05D005488 3.3e-06 56.2 71 38.0
Ah.11g051130 Amaranthus hybridus HOM05D004876 ORTHO05D005488 4.3e-06 55.8 111 29.7
Peaxi162Scf00073g02225 Petunia axillaris HOM05D004876 ORTHO05D005488 7.3e-06 55.1 111 29.7


User provided reference genes

Program Settings