Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cre03.g145747 Chlamydomonas reinhardtii HOM05D003701 ORTHO05D004771 8.0e-233 810.1 412 100.0
PRCOL_00001179 Prasinoderma coloniale HOM05D003701 ORTHO05D004771 2.0e-154 549.7 374 73.8
MCO05G587 Micromonas commoda HOM05D003701 ORTHO05D004771 9.1e-152 540.8 372 71.2
AagrBONN_evm.TU.Sc2ySwM_369.393 Anthoceros agrestis HOM05D003701 ORTHO05D004771 5.9e-151 538.1 370 73.0
SMO146G0105 Selaginella moellendorffii HOM05D003701 ORTHO05D004771 1.7e-150 536.6 388 71.1
Mapoly0007s0052 Marchantia polymorpha HOM05D003701 ORTHO05D004771 8.5e-150 534.3 389 70.2
Hund12041 Selenicereus undatus HOM05D003701 ORTHO05D004771 9.4e-149 530.8 384 69.3
arahy.Tifrunner.gnm1.ann1.V7IKH4 Arachis hypogaea HOM05D003701 ORTHO05D004771 2.1e-148 529.6 371 71.2
arahy.Tifrunner.gnm1.ann1.X76XU5 Arachis hypogaea HOM05D003701 ORTHO05D004771 2.1e-148 529.6 371 71.2
Lalb_Chr06g0162271 Lupinus albus HOM05D003701 ORTHO05D004771 1.0e-147 527.3 371 71.2
Sc06g0004590 Simmondsia chinensis HOM05D003701 ORTHO05D004771 2.3e-147 526.2 384 69.3
Sc09g0006470 Simmondsia chinensis HOM05D003701 ORTHO05D004771 2.3e-147 526.2 384 69.0
SGA_v2.0_scaffold51G18675 Striga asiatica HOM05D003701 ORTHO05D004771 3.9e-147 525.4 389 68.9
Lsat_1_v5_gn_2_114381 Lactuca sativa HOM05D003701 ORTHO05D004771 5.1e-147 525.0 389 69.7
Glyma.20G179500 Glycine max HOM05D003701 ORTHO05D004771 6.7e-147 524.6 369 71.0
Lalb_Chr02g0142141 Lupinus albus HOM05D003701 ORTHO05D004771 6.7e-147 524.6 371 70.6
QL08p056106 Quercus lobata HOM05D003701 ORTHO05D004771 8.8e-147 524.2 392 68.4
CiPaw.02G174300 Carya illinoinensis HOM05D003701 ORTHO05D004771 1.1e-146 523.9 378 70.1
TAR633G1876 Trochodendron aralioides HOM05D003701 ORTHO05D004771 1.1e-146 523.9 384 69.5
Nitab4.5_0005490g0010 Nicotiana tabacum HOM05D003701 ORTHO05D004771 1.5e-146 523.5 376 69.4
ATR0115G006 Amborella trichopoda HOM05D003701 ORTHO05D004771 2.0e-146 523.1 373 69.4
SEGI_31492 Sequoiadendron giganteum HOM05D003701 ORTHO05D004771 2.6e-146 522.7 376 70.5
AUR62041045 Chenopodium quinoa HOM05D003701 ORTHO05D004771 3.3e-146 522.3 374 69.0
HanXRQChr15g0496661 Helianthus annuus HOM05D003701 ORTHO05D004771 3.3e-146 522.3 380 70.3
TPR.G1904 Trifolium pratense HOM05D003701 ORTHO05D004771 3.3e-146 522.3 371 70.4
THA.LOC104827296 Tarenaya hassleriana HOM05D003701 ORTHO05D004771 4.4e-146 521.9 397 67.8
Ah.06g192010 Amaranthus hybridus HOM05D003701 ORTHO05D004771 5.7e-146 521.5 374 68.7
Migut.F01774 Erythranthe guttata HOM05D003701 ORTHO05D004771 9.7e-146 520.8 389 68.1
Gohir.A10G206500 Gossypium hirsutum HOM05D003701 ORTHO05D004771 9.7e-146 520.8 371 69.8
Nn2g13085 Nelumbo nucifera HOM05D003701 ORTHO05D004771 9.7e-146 520.8 381 68.2
HanXRQChr09g0249701 Helianthus annuus HOM05D003701 ORTHO05D004771 1.3e-145 520.4 395 68.4
VMungo0720G1162 Vigna mungo HOM05D003701 ORTHO05D004771 1.3e-145 520.4 371 69.8
Ciclev10031547m.g Citrus clementina HOM05D003701 ORTHO05D004771 1.7e-145 520.0 381 70.6
Glyma.10G211400 Glycine max HOM05D003701 ORTHO05D004771 1.7e-145 520.0 371 69.8
Cpa.g.sc53.71 Carica papaya HOM05D003701 ORTHO05D004771 2.2e-145 519.6 368 70.4
Gorai.011G240200 Gossypium raimondii HOM05D003701 ORTHO05D004771 2.2e-145 519.6 369 69.9
Peaxi162Scf00747g00122 Petunia axillaris HOM05D003701 ORTHO05D004771 2.2e-145 519.6 376 69.1
MSTRG.8153 Avicennia marina HOM05D003701 ORTHO05D004771 2.8e-145 519.2 389 67.9
FvH4_7g19670 Fragaria vesca HOM05D003701 ORTHO05D004771 2.8e-145 519.2 371 71.2
ClCG08G007450 Citrullus lanatus HOM05D003701 ORTHO05D004771 3.7e-145 518.8 371 70.4
CAN.G186.45 Capsicum annuum HOM05D003701 ORTHO05D004771 4.8e-145 518.5 376 69.4
ECA232G2521 Erigeron canadensis HOM05D003701 ORTHO05D004771 4.8e-145 518.5 389 70.2
MBI10_g04889_MAGBIO Magnolia biondii HOM05D003701 ORTHO05D004771 4.8e-145 518.5 393 67.7
MELO3C019790.2 Cucumis melo HOM05D003701 ORTHO05D004771 6.3e-145 518.1 371 70.6
CsaV3_6G036360 Cucumis sativus L. HOM05D003701 ORTHO05D004771 6.3e-145 518.1 371 70.6
Potri.010G221600 Populus trichocarpa HOM05D003701 ORTHO05D004771 6.3e-145 518.1 371 69.8
Eucgr.G02824 Eucalyptus grandis HOM05D003701 ORTHO05D004771 8.2e-145 517.7 376 69.7
FAN10G2919 Fragaria x ananassa HOM05D003701 ORTHO05D004771 8.2e-145 517.7 371 70.9
Medtr1g095250 Medicago truncatula HOM05D003701 ORTHO05D004771 8.2e-145 517.7 369 70.2
GSVIVG01016288001 Vitis vinifera HOM05D003701 ORTHO05D004771 8.2e-145 517.7 381 68.5
Ca_10573_v3 Cicer arietinum L. HOM05D003701 ORTHO05D004771 1.1e-144 517.3 371 69.8
Ca_29596_v3 Cicer arietinum L. HOM05D003701 ORTHO05D004771 1.1e-144 517.3 371 69.8
DCAR_015315 Daucus carota HOM05D003701 ORTHO05D004771 1.1e-144 517.3 371 70.1
FAN03G0046 Fragaria x ananassa HOM05D003701 ORTHO05D004771 1.1e-144 517.3 371 70.9
Phvul.007G094200 Phaseolus vulgaris HOM05D003701 ORTHO05D004771 1.1e-144 517.3 371 69.8
TAR623G1268 Trochodendron aralioides HOM05D003701 ORTHO05D004771 1.1e-144 517.3 380 69.7
FAN06G0474 Fragaria x ananassa HOM05D003701 ORTHO05D004771 1.4e-144 516.9 371 70.9
Gohir.D10G214600 Gossypium hirsutum HOM05D003701 ORTHO05D004771 1.4e-144 516.9 371 69.3
MBI02_g43493_MAGBIO Magnolia biondii HOM05D003701 ORTHO05D004771 1.4e-144 516.9 393 67.2
Solyc04g049350.4 Solanum lycopersicum HOM05D003701 ORTHO05D004771 1.4e-144 516.9 371 69.3
Sopen04g019270 Solanum pennellii HOM05D003701 ORTHO05D004771 1.4e-144 516.9 371 69.3
PGSC0003DMG400024392 Solanum tuberosum HOM05D003701 ORTHO05D004771 1.4e-144 516.9 371 69.3
CANSAT56G3258 Cannabis sativa HOM05D003701 ORTHO05D004771 1.8e-144 516.5 378 68.8
Thecc.10G072600 Theobroma cacao HOM05D003701 ORTHO05D004771 1.8e-144 516.5 371 69.0
Duzib106G0278 Durio zibethinus HOM05D003701 ORTHO05D004771 3.1e-144 515.8 369 69.1
Dinv11780 Davidia involucrata HOM05D003701 ORTHO05D004771 4.1e-144 515.4 376 68.4
PGSC0003DMG400016016 Solanum tuberosum HOM05D003701 ORTHO05D004771 4.1e-144 515.4 376 68.6
Manes.10G045200 Manihot esculenta HOM05D003701 ORTHO05D004771 5.3e-144 515.0 371 69.5
Solyc04g009620.4 Solanum lycopersicum HOM05D003701 ORTHO05D004771 5.3e-144 515.0 371 69.5
HPP92_012666 Vanilla planifolia HOM05D003701 ORTHO05D004771 5.3e-144 515.0 381 68.5
Atru.chr12.740 Acer truncatum HOM05D003701 ORTHO05D004771 7.0e-144 514.6 381 69.3
Actinidia38848 Actinidia chinensis HOM05D003701 ORTHO05D004771 7.0e-144 514.6 387 66.9
arahy.Tifrunner.gnm1.ann1.6FL4NC Arachis hypogaea HOM05D003701 ORTHO05D004771 7.0e-144 514.6 369 68.8
Hma1.2p1_1004F.1_g246800 Hydrangea macrophylla HOM05D003701 ORTHO05D004771 7.0e-144 514.6 371 69.3
Sopen04g004770 Solanum pennellii HOM05D003701 ORTHO05D004771 7.0e-144 514.6 371 69.3
TWI74G0111 Tripterygium wilfordii HOM05D003701 ORTHO05D004771 7.0e-144 514.6 387 68.5
TWI74G0263 Tripterygium wilfordii HOM05D003701 ORTHO05D004771 7.0e-144 514.6 387 68.5
CDE04G2332 Ceratophyllum demersum HOM05D003701 ORTHO05D004771 9.1e-144 514.2 379 68.9
MD01G1108900 Malus domestica HOM05D003701 ORTHO05D004771 9.1e-144 514.2 371 69.5
Aqoxy1G01249 Aquilegia oxysepala HOM05D003701 ORTHO05D004771 1.5e-143 513.5 379 68.6
MSTRG.367 Avicennia marina HOM05D003701 ORTHO05D004771 2.6e-143 512.7 376 68.6
MD07G1175200 Malus domestica HOM05D003701 ORTHO05D004771 3.5e-143 512.3 371 69.0
Thhalv10011486m.g Eutrema salsugineum HOM05D003701 ORTHO05D004771 4.5e-143 511.9 377 67.9
Lj5g0008768 Lotus japonicus HOM05D003701 ORTHO05D004771 4.5e-143 511.9 371 68.5
AL1G55580 Arabidopsis lyrata HOM05D003701 ORTHO05D004771 5.9e-143 511.5 379 68.6
AUR62037661 Chenopodium quinoa HOM05D003701 ORTHO05D004771 5.9e-143 511.5 394 65.2
PSO063G5795 Papaver somniferum HOM05D003701 ORTHO05D004771 5.9e-143 511.5 379 69.9
RcHm_v2.0_Chr1g0363491 Rosa chinensis HOM05D003701 ORTHO05D004771 5.9e-143 511.5 379 69.4
CSS0025729 Camellia sinensis var. sinensis HOM05D003701 ORTHO05D004771 7.7e-143 511.1 376 67.3
Gohir.A05G297100 Gossypium hirsutum HOM05D003701 ORTHO05D004771 7.7e-143 511.1 377 68.2
PSO339G3023 Papaver somniferum HOM05D003701 ORTHO05D004771 7.7e-143 511.1 379 69.9
AT1G48850 Arabidopsis thaliana HOM05D003701 ORTHO05D004771 1.3e-142 510.4 379 68.6
BcaB02g11304 Brassica carinata HOM05D003701 ORTHO05D004771 1.3e-142 510.4 377 68.2
Potri.008G040700 Populus trichocarpa HOM05D003701 ORTHO05D004771 1.3e-142 510.4 404 65.8
BcaC05g27549 Brassica carinata HOM05D003701 ORTHO05D004771 1.7e-142 510.0 377 67.9
A05p20860 Brassica napus HOM05D003701 ORTHO05D004771 1.7e-142 510.0 377 67.9
C05p35350 Brassica napus HOM05D003701 ORTHO05D004771 1.7e-142 510.0 377 67.9
BolC5t32248H Brassica oleracea HOM05D003701 ORTHO05D004771 1.7e-142 510.0 377 67.9
BraA05t20991Z Brassica rapa HOM05D003701 ORTHO05D004771 1.7e-142 510.0 377 67.9
A08p04400 Brassica napus HOM05D003701 ORTHO05D004771 2.2e-142 509.6 377 67.6
BcaC07g37102 Brassica carinata HOM05D003701 ORTHO05D004771 2.9e-142 509.2 377 67.6
CARHR038850 Cardamine hirsuta HOM05D003701 ORTHO05D004771 2.9e-142 509.2 379 68.1
Sed0016616 Sechium edule HOM05D003701 ORTHO05D004771 2.9e-142 509.2 371 69.5
BolC8t47272H Brassica oleracea HOM05D003701 ORTHO05D004771 3.8e-142 508.8 377 67.6
Sp1g35740 Schrenkiella parvula HOM05D003701 ORTHO05D004771 3.8e-142 508.8 377 67.6
BraA08t32466Z Brassica rapa HOM05D003701 ORTHO05D004771 5.0e-142 508.4 377 67.4
Aa31LG10G4830 Aethionema arabicum HOM05D003701 ORTHO05D004771 6.5e-142 508.1 379 68.3
C08p04710 Brassica napus HOM05D003701 ORTHO05D004771 6.5e-142 508.1 377 67.6
Carub.0001s3800 Capsella rubella HOM05D003701 ORTHO05D004771 6.5e-142 508.1 379 68.3
unitig_899.g14441 Utricularia gibba HOM05D003701 ORTHO05D004771 1.1e-141 507.3 374 69.3
Os03g0254800 Oryza sativa ssp. japonica HOM05D003701 ORTHO05D004771 1.5e-141 506.9 371 68.5
EL10Ac2g03249 Beta vulgaris HOM05D003701 ORTHO05D004771 1.9e-141 506.5 384 66.9
BcaB04g17381 Brassica carinata HOM05D003701 ORTHO05D004771 2.5e-141 506.1 387 66.4
Sabra08G0027700 Salix brachista HOM05D003701 ORTHO05D004771 3.2e-141 505.8 376 68.4
Nitab4.5_0001029g0070 Nicotiana tabacum HOM05D003701 ORTHO05D004771 4.2e-141 505.4 404 64.6
Gohir.D05G297000 Gossypium hirsutum HOM05D003701 ORTHO05D004771 5.5e-141 505.0 377 67.4
Gorai.009G314200 Gossypium raimondii HOM05D003701 ORTHO05D004771 5.5e-141 505.0 377 67.4
Lj1A914T43 Lonicera japonica HOM05D003701 ORTHO05D004771 1.2e-140 503.8 371 69.3
Gorai.011G240100 Gossypium raimondii HOM05D003701 ORTHO05D004771 8.0e-140 501.1 371 66.6
FAN01G1080 Fragaria x ananassa HOM05D003701 ORTHO05D004771 6.7e-139 498.0 410 64.9
PGR142G1908 Punica granatum HOM05D003701 ORTHO05D004771 1.5e-138 496.9 370 68.1
Gohir.A10G206400 Gossypium hirsutum HOM05D003701 ORTHO05D004771 2.6e-138 496.1 371 65.5
Sabra10G0171500 Salix brachista HOM05D003701 ORTHO05D004771 1.7e-137 493.4 420 61.2
Actinidia03057 Actinidia chinensis HOM05D003701 ORTHO05D004771 2.8e-137 492.7 376 65.4
Migut.F01773 Erythranthe guttata HOM05D003701 ORTHO05D004771 6.3e-137 491.5 375 65.1
FAN10G2344 Fragaria x ananassa HOM05D003701 ORTHO05D004771 7.0e-136 488.0 371 67.9
DCAR_012659 Daucus carota HOM05D003701 ORTHO05D004771 1.6e-135 486.9 384 65.4
SalBow4G1339 Salvia bowleyana HOM05D003701 ORTHO05D004771 2.6e-135 486.1 374 66.6
arahy.Tifrunner.gnm1.ann1.914CGH Arachis hypogaea HOM05D003701 ORTHO05D004771 3.2e-133 479.2 341 69.5
CAN.G186.44 Capsicum annuum HOM05D003701 ORTHO05D004771 7.2e-133 478.0 369 64.2
Rhsim09G0152400 Rhododendron simsii HOM05D003701 ORTHO05D004771 1.2e-132 477.2 453 57.0
CSS0011231 Camellia sinensis var. sinensis HOM05D003701 ORTHO05D004771 3.6e-132 475.7 376 63.6
Duzib114G1041 Durio zibethinus HOM05D003701 ORTHO05D004771 1.2e-130 470.7 379 63.6
GSVIVG01025176001 Vitis vinifera HOM05D003701 ORTHO05D004771 2.6e-130 469.5 376 61.4
vmacro04876 Vaccinium macrocarpon HOM05D003701 ORTHO05D004771 5.7e-130 468.4 500 53.0
Gohir.D05G297025 Gossypium hirsutum HOM05D003701 ORTHO05D004771 9.1e-128 461.1 377 62.9
CiPaw.01G273500 Carya illinoinensis HOM05D003701 ORTHO05D004771 2.0e-122 443.4 328 69.8
CANSAT78G2428 Cannabis sativa HOM05D003701 ORTHO05D004771 4.4e-122 442.2 343 64.7
Psat6g184400 Pisum sativum HOM05D003701 ORTHO05D004771 9.8e-122 441.0 316 69.9
Prupe.2G214400 Prunus persica HOM05D003701 ORTHO05D004771 4.1e-120 435.6 322 68.3
Dinv31329 Davidia involucrata HOM05D003701 ORTHO05D004771 4.5e-119 432.2 329 67.5
Zm00001eb011020 Zea mays HOM05D003701 ORTHO05D004771 6.6e-118 428.3 321 67.6
Oeu027479.1 Olea europaea HOM05D003701 ORTHO05D004771 9.5e-117 424.5 348 63.5
Oeu007390.4 Olea europaea HOM05D003701 ORTHO05D004771 2.8e-116 422.9 330 66.1
unitig_736.g22517 Utricularia gibba HOM05D003701 ORTHO05D004771 1.8e-112 410.2 366 59.0
Eucgr.J01090 Eucalyptus grandis HOM05D003701 ORTHO05D004771 8.0e-108 394.8 337 62.0
Zm00001eb398410 Zea mays HOM05D003701 ORTHO05D004771 8.3e-105 384.8 313 61.7
CDE07G1562 Ceratophyllum demersum HOM05D003701 ORTHO05D004771 1.1e-104 384.4 379 55.7
CBR_g41627 Chara braunii HOM05D003701 ORTHO05D004771 1.3e-97 360.9 374 53.7
Pp3c1_35940 Physcomitrium patens HOM05D003701 ORTHO05D004771 6.4e-97 358.6 270 67.8
COL.COLO4_23690 Corchorus olitorius HOM05D003701 ORTHO05D004771 3.2e-96 356.3 260 68.5
COL.COLO4_23691 Corchorus olitorius HOM05D003701 ORTHO05D004771 9.2e-88 328.2 246 67.9
Haze_27259 Corylus avellana HOM05D003701 ORTHO05D004771 1.5e-82 310.8 362 45.6
Cfa022484 Carpinus fangiana HOM05D003701 ORTHO05D004771 6.6e-78 295.4 359 48.2
Haze_16899 Corylus avellana HOM05D003701 ORTHO05D004771 3.1e-75 286.6 221 67.0
Cc09_g02040 Coffea canephora HOM05D003701 ORTHO05D004771 1.2e-71 274.6 177 75.7
Gohir.D10G214466 Gossypium hirsutum HOM05D003701 ORTHO05D004771 4.9e-65 252.7 172 70.9
Gohir.D10G214532 Gossypium hirsutum HOM05D003701 ORTHO05D004771 1.4e-64 251.1 193 63.7
Cc09_g02030 Coffea canephora HOM05D003701 ORTHO05D004771 8.1e-60 235.3 180 66.7
SHI12194 Sapria himalayana HOM05D003666 ORTHO05D004770 5.5e-56 222.6 173 64.7
MSTRG.366 Avicennia marina HOM05D003701 ORTHO05D004771 1.5e-50 204.5 146 68.5
RcHm_v2.0_Chr4g0427911 Rosa chinensis HOM05D003701 ORTHO05D004771 3.9e-46 189.9 220 52.7
TAR636G0034 Trochodendron aralioides HOM05D003701 ORTHO05D004771 2.2e-41 174.1 123 65.0
TAR636G0416 Trochodendron aralioides HOM05D003701 ORTHO05D004771 2.2e-41 174.1 123 65.0
FAN12G0728 Fragaria x ananassa HOM05D003701 ORTHO05D004771 5.1e-38 162.9 242 45.9
Glyma.14G185633 Glycine max HOM05D003701 ORTHO05D004771 1.1e-32 145.2 99 72.7
MD01G1109200 Malus domestica HOM05D003701 ORTHO05D004771 1.4e-27 128.3 103 63.1
SMO173G0015 Selaginella moellendorffii HOM05D003701 ORTHO05D004771 3.2e-24 117.1 217 41.5
QL07p006097 Quercus lobata HOM05D003701 ORTHO05D030296 2.6e-21 107.5 82 67.1
Oeu052763.1 Olea europaea HOM05D003701 ORTHO05D030296 6.3e-20 102.8 61 83.6
QL07p006183 Quercus lobata HOM05D003701 ORTHO05D030296 1.7e-17 94.7 61 78.7
QL09p045974 Quercus lobata HOM05D003701 ORTHO05D030296 1.7e-17 94.7 61 78.7
VMungo0647G0194 Vigna mungo HOM05D003701 ORTHO05D432816 2.3e-14 84.3 91 51.6
FAN17G1952 Fragaria x ananassa HOM05D003701 ORTHO05D004771 5.2e-14 83.2 244 30.3
FAN12G0587 Fragaria x ananassa HOM05D003701 ORTHO05D004771 2.8e-12 77.4 90 45.6
FAN01G1877 Fragaria x ananassa HOM05D003701 ORTHO05D208017 4.8e-12 76.6 79 54.4
CBR_g74262 Chara braunii HOM05D003701 ORTHO05D004771 5.9e-10 69.7 42 78.6
Medtr0368s0020 Medicago truncatula HOM05D003701 ORTHO05D026922 2.2e-09 67.8 50 60.0
Glyma.14G185666 Glycine max HOM05D003701 ORTHO05D026922 3.6e-07 60.5 47 59.6
Oeu043945.1 Olea europaea HOM05D003701 ORTHO05D004771 1.8e-06 58.2 44 59.1


User provided reference genes

Program Settings