Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cre03.g145707 Chlamydomonas reinhardtii HOM05D005709 ORTHO05D006306 4.2e-258 894.4 530 100.0
SEGI_11890 Sequoiadendron giganteum HOM05D005709 ORTHO05D006306 3.4e-42 177.2 327 33.9
Pp3c1_9650 Physcomitrium patens HOM05D005709 ORTHO05D006306 2.9e-41 174.1 466 32.0
SMO137G0394 Selaginella moellendorffii HOM05D005709 ORTHO05D006306 9.2e-40 169.1 333 35.4
AagrBONN_evm.TU.Sc2ySwM_368.1496 Anthoceros agrestis HOM05D005709 ORTHO05D006306 1.6e-39 168.3 198 47.0
Glyma.09G199500 Glycine max HOM05D005709 ORTHO05D006306 2.7e-39 167.5 320 34.4
PGR102G2444 Punica granatum HOM05D005709 ORTHO05D006306 3.5e-39 167.2 436 29.1
Lj2g0012290 Lotus japonicus HOM05D005709 ORTHO05D006306 4.6e-39 166.8 326 35.3
Zm00001eb040880 Zea mays HOM05D005709 ORTHO05D006306 1.0e-38 165.6 331 35.3
Mapoly0135s0033 Marchantia polymorpha HOM05D005709 ORTHO05D006306 1.3e-38 165.2 437 29.7
Eucgr.H04723 Eucalyptus grandis HOM05D005709 ORTHO05D006306 1.7e-38 164.9 239 42.3
Os08g0447200 Oryza sativa ssp. japonica HOM05D005709 ORTHO05D006306 1.7e-38 164.9 367 34.1
Peaxi162Scf00474g00732 Petunia axillaris HOM05D005709 ORTHO05D006306 1.7e-38 164.9 324 33.3
Sc03g0000380 Simmondsia chinensis HOM05D005709 ORTHO05D006306 1.7e-38 164.9 434 30.0
Phvul.002G146800 Phaseolus vulgaris HOM05D005709 ORTHO05D006306 3.0e-38 164.1 320 34.1
MD03G1143200 Malus domestica HOM05D005709 ORTHO05D006306 3.9e-38 163.7 320 35.3
Lalb_Chr09g0325971 Lupinus albus HOM05D005709 ORTHO05D006306 8.6e-38 162.5 321 34.6
Sopen11g005470 Solanum pennellii HOM05D005709 ORTHO05D006306 8.6e-38 162.5 327 33.3
Solyc11g010660.2 Solanum lycopersicum HOM05D005709 ORTHO05D006306 1.5e-37 161.8 327 33.0
VMungo1215G1966 Vigna mungo HOM05D005709 ORTHO05D006306 2.5e-37 161.0 320 32.8
CBR_g78875 Chara braunii HOM05D005709 ORTHO05D006306 5.6e-37 159.8 463 30.5
PGSC0003DMG400016130 Solanum tuberosum HOM05D005709 ORTHO05D006306 7.3e-37 159.5 327 32.4
Cfa006877 Carpinus fangiana HOM05D005709 ORTHO05D006306 1.2e-36 158.7 323 32.8
Potri.006G134400 Populus trichocarpa HOM05D005709 ORTHO05D006306 1.2e-36 158.7 310 33.5
TWI74G1439 Tripterygium wilfordii HOM05D005709 ORTHO05D006306 1.2e-36 158.7 239 40.2
Haze_03880 Corylus avellana HOM05D005709 ORTHO05D006306 1.6e-36 158.3 323 32.8
MBI16_g12470_MAGBIO Magnolia biondii HOM05D005709 ORTHO05D006306 1.6e-36 158.3 323 33.4
QL06p035832 Quercus lobata HOM05D005709 ORTHO05D006306 2.8e-36 157.5 332 32.8
CiPaw.07G047300 Carya illinoinensis HOM05D005709 ORTHO05D006306 3.6e-36 157.1 239 40.6
unitig_32.g11802 Utricularia gibba HOM05D005709 ORTHO05D006306 3.6e-36 157.1 371 31.8
Prupe.6G202100 Prunus persica HOM05D005709 ORTHO05D006306 6.2e-36 156.4 320 33.8
Psat2g082080 Pisum sativum HOM05D005709 ORTHO05D006306 1.1e-35 155.6 321 33.3
arahy.Tifrunner.gnm1.ann1.7T2SE7 Arachis hypogaea HOM05D005709 ORTHO05D006306 1.4e-35 155.2 237 38.8
arahy.Tifrunner.gnm1.ann1.IH5V0S Arachis hypogaea HOM05D005709 ORTHO05D006306 1.4e-35 155.2 237 38.8
Hund16527 Selenicereus undatus HOM05D005709 ORTHO05D006306 1.8e-35 154.8 361 31.9
FAN28G2327 Fragaria x ananassa HOM05D005709 ORTHO05D006306 2.4e-35 154.5 238 40.8
Nitab4.5_0013799g0010 Nicotiana tabacum HOM05D005709 ORTHO05D006306 2.4e-35 154.5 329 32.8
RcHm_v2.0_Chr2g0111161 Rosa chinensis HOM05D005709 ORTHO05D006306 2.4e-35 154.5 334 33.8
Ah.02g123530 Amaranthus hybridus HOM05D005709 ORTHO05D006306 3.1e-35 154.1 323 33.1
Gohir.A02G144800 Gossypium hirsutum HOM05D005709 ORTHO05D006306 3.1e-35 154.1 324 32.4
FAN19G1851 Fragaria x ananassa HOM05D005709 ORTHO05D006306 4.0e-35 153.7 325 33.5
Rhsim08G0016800 Rhododendron simsii HOM05D005709 ORTHO05D006306 4.0e-35 153.7 238 39.1
Lsat_1_v5_gn_2_70300 Lactuca sativa HOM05D005709 ORTHO05D006306 5.2e-35 153.3 338 31.4
TAR625G0141 Trochodendron aralioides HOM05D005709 ORTHO05D006306 5.2e-35 153.3 325 31.4
HanXRQChr14g0442981 Helianthus annuus HOM05D005709 ORTHO05D006306 6.8e-35 152.9 435 29.4
Nitab4.5_0007624g0020 Nicotiana tabacum HOM05D005709 ORTHO05D006306 6.8e-35 152.9 329 31.9
Nn3g18597 Nelumbo nucifera HOM05D005709 ORTHO05D006306 8.9e-35 152.5 238 38.7
Gorai.003G037400 Gossypium raimondii HOM05D005709 ORTHO05D006306 1.2e-34 152.1 324 32.4
Manes.12G125900 Manihot esculenta HOM05D005709 ORTHO05D006306 1.2e-34 152.1 350 31.7
AUR62003667 Chenopodium quinoa HOM05D005709 ORTHO05D006306 1.5e-34 151.8 239 39.7
CANSAT01G1032 Cannabis sativa HOM05D005709 ORTHO05D006306 2.0e-34 151.4 325 32.6
FvH4_1g19610 Fragaria vesca HOM05D005709 ORTHO05D006306 2.6e-34 151.0 238 39.5
Duzib187G1076 Durio zibethinus HOM05D005709 ORTHO05D006306 3.4e-34 150.6 330 32.4
vmacro18555 Vaccinium macrocarpon HOM05D005709 ORTHO05D006306 3.4e-34 150.6 318 32.7
BolC3t18312H Brassica oleracea HOM05D005709 ORTHO05D006306 5.8e-34 149.8 236 39.0
Sabra06G0105500 Salix brachista HOM05D005709 ORTHO05D006306 5.8e-34 149.8 323 30.7
SGA_v2.0_scaffold115G32123 Striga asiatica HOM05D005709 ORTHO05D006306 5.8e-34 149.8 240 38.8
FAN26G3468 Fragaria x ananassa HOM05D005709 ORTHO05D006306 7.6e-34 149.4 208 42.8
MD11G1164000 Malus domestica HOM05D005709 ORTHO05D006306 7.6e-34 149.4 320 33.8
ATR0763G252 Amborella trichopoda HOM05D005709 ORTHO05D006306 9.9e-34 149.1 443 27.5
A06p32320 Brassica napus HOM05D005709 ORTHO05D006306 1.7e-33 148.3 317 33.1
ECA238G0695 Erigeron canadensis HOM05D005709 ORTHO05D006306 1.7e-33 148.3 336 32.4
C03p60550 Brassica napus HOM05D005709 ORTHO05D006306 2.2e-33 147.9 350 31.4
Atru.chr3.1240 Acer truncatum HOM05D005709 ORTHO05D006306 2.9e-33 147.5 237 38.4
Ciclev10025155m.g Citrus clementina HOM05D005709 ORTHO05D006306 2.9e-33 147.5 237 37.6
Gohir.D03G035800 Gossypium hirsutum HOM05D005709 ORTHO05D006306 2.9e-33 147.5 324 31.8
Actinidia28821 Actinidia chinensis HOM05D005709 ORTHO05D006306 3.8e-33 147.1 321 32.4
BraA06t26158Z Brassica rapa HOM05D005709 ORTHO05D006306 3.8e-33 147.1 235 39.1
COL.COLO4_27357 Corchorus olitorius HOM05D005709 ORTHO05D006306 4.9e-33 146.7 239 38.9
TPR.G36816 Trifolium pratense HOM05D005709 ORTHO05D006306 4.9e-33 146.7 288 33.0
EL10Ac6g15201 Beta vulgaris HOM05D005709 ORTHO05D006306 6.4e-33 146.4 323 30.3
Medtr5g032050 Medicago truncatula HOM05D005709 ORTHO05D006306 6.4e-33 146.4 322 31.4
AT5G65490 Arabidopsis thaliana HOM05D005709 ORTHO05D006306 8.4e-33 146.0 237 38.0
Thhalv10003796m.g Eutrema salsugineum HOM05D005709 ORTHO05D006306 1.1e-32 145.6 237 38.0
PSO170G3043 Papaver somniferum HOM05D005709 ORTHO05D006306 1.1e-32 145.6 252 37.3
vmacro21792 Vaccinium macrocarpon HOM05D005709 ORTHO05D006306 1.1e-32 145.6 236 38.6
GSVIVG01007131001 Vitis vinifera HOM05D005709 ORTHO05D006306 1.1e-32 145.6 237 37.6
PSO017G1508 Papaver somniferum HOM05D005709 ORTHO05D006306 1.4e-32 145.2 384 30.2
Carub.0008s2634 Capsella rubella HOM05D005709 ORTHO05D006306 1.9e-32 144.8 351 31.6
Ca_22702_v3 Cicer arietinum L. HOM05D005709 ORTHO05D006306 2.4e-32 144.4 330 32.1
Sp2g28570 Schrenkiella parvula HOM05D005709 ORTHO05D006306 3.2e-32 144.1 239 37.7
CSS0001510 Camellia sinensis var. sinensis HOM05D005709 ORTHO05D006306 5.4e-32 143.3 435 29.7
CARHR279470 Cardamine hirsuta HOM05D005709 ORTHO05D006306 5.4e-32 143.3 351 30.5
Aa31LG1G16510 Aethionema arabicum HOM05D005709 ORTHO05D006306 9.2e-32 142.5 319 30.7
AL8G43070 Arabidopsis lyrata HOM05D005709 ORTHO05D006306 1.2e-31 142.1 351 31.3
Thecc.01G090000 Theobroma cacao HOM05D005709 ORTHO05D006306 1.6e-31 141.7 322 31.4
CsaV3_3G006890 Cucumis sativus L. HOM05D005709 ORTHO05D006306 2.7e-31 141.0 240 36.7
Cpa.g.sc55.19 Carica papaya HOM05D005709 ORTHO05D006306 3.5e-31 140.6 353 29.5
Migut.K00802 Erythranthe guttata HOM05D005709 ORTHO05D006306 6.0e-31 139.8 240 37.1
SMO137G0085 Selaginella moellendorffii HOM05D005709 ORTHO05D006306 6.0e-31 139.8 201 42.3
MELO3C016416.2 Cucumis melo HOM05D005709 ORTHO05D006306 1.0e-30 139.0 238 36.6
ClCG10G007760 Citrullus lanatus HOM05D005709 ORTHO05D006306 1.3e-30 138.7 238 36.6
Aqoxy5G01380 Aquilegia oxysepala HOM05D005709 ORTHO05D006306 1.7e-30 138.3 243 35.4
Sed0005807 Sechium edule HOM05D005709 ORTHO05D006306 2.3e-30 137.9 238 37.4
vmacro18553 Vaccinium macrocarpon HOM05D005709 ORTHO05D006306 3.0e-30 137.5 229 38.0
Lju188A3T31 Lonicera japonica HOM05D005709 ORTHO05D006306 8.7e-30 136.0 238 37.0
SHI21884 Sapria himalayana HOM05D005709 ORTHO05D006306 3.3e-29 134.0 238 36.1
Cc07_g14050 Coffea canephora HOM05D005709 ORTHO05D006306 2.8e-28 131.0 253 36.4
DCAR_010090 Daucus carota HOM05D005709 ORTHO05D006306 4.7e-28 130.2 353 30.3
HPP92_015350 Vanilla planifolia HOM05D005709 ORTHO05D006306 1.4e-27 128.6 232 36.6
Glyma.01G022800 Glycine max HOM05D005709 ORTHO05D006306 1.1e-24 119.0 205 38.0
CAN.G1344.19 Capsicum annuum HOM05D005709 ORTHO05D006306 4.2e-24 117.1 217 35.5
TAR381G1451 Trochodendron aralioides HOM05D005709 ORTHO05D006306 6.0e-23 113.2 155 40.0
Dinv13596 Davidia involucrata HOM05D005709 ORTHO05D006306 3.3e-21 107.5 322 28.0
BcaC01g02779 Brassica carinata HOM05D005709 ORTHO05D006306 2.2e-17 94.7 83 49.4
vmacro21794 Vaccinium macrocarpon HOM05D005709 ORTHO05D006306 1.1e-16 92.4 140 37.1
PRCOL_00002122 Prasinoderma coloniale HOM05D005709 ORTHO05D006306 3.2e-16 90.9 278 31.3
AUR62017977 Chenopodium quinoa HOM05D005709 ORTHO05D006306 1.3e-12 79.0 182 35.7
PSO210G2291 Papaver somniferum HOM05D005709 ORTHO05D006306 9.0e-11 72.8 234 29.1
THA.LOC104809180 Tarenaya hassleriana HOM05D005709 ORTHO05D006306 2.6e-10 71.2 185 33.5
HPP92_015330 Vanilla planifolia HOM05D005709 ORTHO05D006306 1.8e-06 58.5 126 34.9


User provided reference genes

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