Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cre03.g145207 Chlamydomonas reinhardtii HOM05D007078 ORTHO05D008745 4.4e-124 448.0 227 100.0
Potri.014G137300 Populus trichocarpa HOM05D007078 ORTHO05D008745 1.0e-43 181.0 153 53.6
AagrBONN_evm.TU.Sc2ySwM_117.1018 Anthoceros agrestis HOM05D007078 ORTHO05D008745 1.7e-43 180.3 156 53.8
VMungo1383G1152 Vigna mungo HOM05D007078 ORTHO05D008745 1.7e-43 180.3 153 56.2
Phvul.001G147500 Phaseolus vulgaris HOM05D007078 ORTHO05D008745 2.9e-43 179.5 153 56.2
Glyma.19G152600 Glycine max HOM05D007078 ORTHO05D008745 6.5e-43 178.3 153 54.9
Manes.05G071800 Manihot esculenta HOM05D007078 ORTHO05D008745 6.5e-43 178.3 141 56.0
Psat3g066400 Pisum sativum HOM05D007078 ORTHO05D008745 8.5e-43 177.9 174 51.7
Aqoxy5G00564 Aquilegia oxysepala HOM05D007078 ORTHO05D008745 1.9e-42 176.8 157 54.1
Hma1.2p1_0628F.1_g191760 Hydrangea macrophylla HOM05D007078 ORTHO05D008745 1.9e-42 176.8 141 56.0
unitig_0.g636 Utricularia gibba HOM05D007078 ORTHO05D008745 1.9e-42 176.8 190 50.0
Lsat_1_v5_gn_9_1840 Lactuca sativa HOM05D007078 ORTHO05D008745 2.5e-42 176.4 144 57.6
SMO358G0655 Selaginella moellendorffii HOM05D007078 ORTHO05D008745 2.5e-42 176.4 149 53.7
Haze_04771 Corylus avellana HOM05D007078 ORTHO05D008745 4.2e-42 175.6 157 53.5
Nn3g21178 Nelumbo nucifera HOM05D007078 ORTHO05D008745 4.2e-42 175.6 176 47.7
Oeu047893.1 Olea europaea HOM05D007078 ORTHO05D008745 4.2e-42 175.6 195 47.2
arahy.Tifrunner.gnm1.ann1.ERKA9X Arachis hypogaea HOM05D007078 ORTHO05D008745 9.4e-42 174.5 169 50.9
Ca_08555_v3 Cicer arietinum L. HOM05D007078 ORTHO05D008745 9.4e-42 174.5 153 52.3
TAR362G1057 Trochodendron aralioides HOM05D007078 ORTHO05D008745 9.4e-42 174.5 157 52.9
arahy.Tifrunner.gnm1.ann1.9GKU3H Arachis hypogaea HOM05D007078 ORTHO05D008745 1.2e-41 174.1 169 50.9
Cfa006079 Carpinus fangiana HOM05D007078 ORTHO05D008745 1.6e-41 173.7 158 52.5
CiPaw.07G095800 Carya illinoinensis HOM05D007078 ORTHO05D008745 1.6e-41 173.7 156 52.6
Glyma.03G149600 Glycine max HOM05D007078 ORTHO05D008745 1.6e-41 173.7 141 58.2
Migut.D00250 Erythranthe guttata HOM05D007078 ORTHO05D008745 3.6e-41 172.6 212 45.8
Eucgr.K03409 Eucalyptus grandis HOM05D007078 ORTHO05D008745 3.6e-41 172.6 171 50.9
BcaC02g12558 Brassica carinata HOM05D007078 ORTHO05D008745 4.7e-41 172.2 160 51.9
A05p00060 Brassica napus HOM05D007078 ORTHO05D008745 4.7e-41 172.2 155 52.9
BolSC55t61232H Brassica oleracea HOM05D007078 ORTHO05D008745 4.7e-41 172.2 160 51.9
BraA05t19002Z Brassica rapa HOM05D007078 ORTHO05D008745 4.7e-41 172.2 155 52.9
CSS0036917 Camellia sinensis var. sinensis HOM05D007078 ORTHO05D008745 4.7e-41 172.2 159 51.6
CSS0044942 Camellia sinensis var. sinensis HOM05D007078 ORTHO05D008745 4.7e-41 172.2 159 51.6
ATR0626G125 Amborella trichopoda HOM05D007078 ORTHO05D008745 6.1e-41 171.8 159 52.2
Duzib138G1888 Durio zibethinus HOM05D007078 ORTHO05D008745 6.1e-41 171.8 144 54.9
Gorai.004G084200 Gossypium raimondii HOM05D007078 ORTHO05D008745 8.0e-41 171.4 144 54.2
Sp4g29960 Schrenkiella parvula HOM05D007078 ORTHO05D008745 8.0e-41 171.4 148 54.1
Cc09_g03260 Coffea canephora HOM05D007078 ORTHO05D008745 1.0e-40 171.0 141 53.9
CsaV3_7G028490 Cucumis sativus L. HOM05D007078 ORTHO05D008745 1.0e-40 171.0 147 54.4
GSVIVG01011060001 Vitis vinifera HOM05D007078 ORTHO05D008745 1.0e-40 171.0 156 51.3
Thhalv10001627m.g Eutrema salsugineum HOM05D007078 ORTHO05D008745 1.4e-40 170.6 161 51.6
Lj1C43T3 Lonicera japonica HOM05D007078 ORTHO05D008745 1.4e-40 170.6 137 55.5
PSO210G6132 Papaver somniferum HOM05D007078 ORTHO05D008745 1.4e-40 170.6 181 47.0
PSO832G3632 Papaver somniferum HOM05D007078 ORTHO05D008745 1.4e-40 170.6 142 53.5
MELO3C015872.2 Cucumis melo HOM05D007078 ORTHO05D008745 2.3e-40 169.9 142 54.9
Gohir.D08G078400 Gossypium hirsutum HOM05D007078 ORTHO05D008745 2.3e-40 169.9 144 53.5
Dinv11266 Davidia involucrata HOM05D007078 ORTHO05D008745 3.0e-40 169.5 161 50.3
RcHm_v2.0_Chr6g0291981 Rosa chinensis HOM05D007078 ORTHO05D008745 3.0e-40 169.5 153 53.6
Sed0016724 Sechium edule HOM05D007078 ORTHO05D008745 3.0e-40 169.5 147 52.4
TPR.G32805 Trifolium pratense HOM05D007078 ORTHO05D008745 3.0e-40 169.5 144 55.6
EL10Ac7g17029 Beta vulgaris HOM05D007078 ORTHO05D008745 4.0e-40 169.1 153 51.0
BNapus_Darmor_BZH_scaffold_188p00040 Brassica napus HOM05D007078 ORTHO05D008745 4.0e-40 169.1 155 52.3
CDE12G0236 Ceratophyllum demersum HOM05D007078 ORTHO05D008745 4.0e-40 169.1 154 53.9
QL12p022959 Quercus lobata HOM05D007078 ORTHO05D008745 4.0e-40 169.1 152 52.0
DCAR_018382 Daucus carota HOM05D007078 ORTHO05D008745 5.2e-40 168.7 140 55.0
Prupe.8G247900 Prunus persica HOM05D007078 ORTHO05D008745 5.2e-40 168.7 147 53.7
Medtr7g094220 Medicago truncatula HOM05D007078 ORTHO05D008745 6.7e-40 168.3 179 46.9
AT2G48070 Arabidopsis thaliana HOM05D007078 ORTHO05D008745 8.8e-40 167.9 149 52.3
Nitab4.5_0005757g0030 Nicotiana tabacum HOM05D007078 ORTHO05D008745 8.8e-40 167.9 157 51.0
Sc24g0004060 Simmondsia chinensis HOM05D007078 ORTHO05D008745 8.8e-40 167.9 141 53.2
TWI59G1055 Tripterygium wilfordii HOM05D007078 ORTHO05D008745 8.8e-40 167.9 137 54.0
CARHR143460 Cardamine hirsuta HOM05D007078 ORTHO05D008745 1.1e-39 167.5 159 50.9
Cpa.g.sc9.128 Carica papaya HOM05D007078 ORTHO05D008745 1.1e-39 167.5 137 54.7
Ciclev10022169m.g Citrus clementina HOM05D007078 ORTHO05D008745 1.1e-39 167.5 186 45.7
FvH4_2g24170 Fragaria vesca HOM05D007078 ORTHO05D008745 1.1e-39 167.5 141 54.6
FAN27G0292 Fragaria x ananassa HOM05D007078 ORTHO05D008745 1.1e-39 167.5 140 55.0
Pp3c24_17730 Physcomitrium patens HOM05D007078 ORTHO05D008745 1.5e-39 167.2 145 55.2
PGR044G0767 Punica granatum HOM05D007078 ORTHO05D008745 1.5e-39 167.2 138 54.3
THA.LOC104823061 Tarenaya hassleriana HOM05D007078 ORTHO05D008745 1.5e-39 167.2 157 51.6
MCO10G051 Micromonas commoda HOM05D007078 ORTHO05D008745 2.0e-39 166.8 134 54.5
PGSC0003DMG400023469 Solanum tuberosum HOM05D007078 ORTHO05D008745 2.0e-39 166.8 163 51.5
AL4G47660 Arabidopsis lyrata HOM05D007078 ORTHO05D008745 2.6e-39 166.4 163 48.5
Lj1g0026447 Lotus japonicus HOM05D007078 ORTHO05D008745 2.6e-39 166.4 153 52.3
Thecc.01G285900 Theobroma cacao HOM05D007078 ORTHO05D008745 2.6e-39 166.4 153 51.0
BcaB02g08732 Brassica carinata HOM05D007078 ORTHO05D008745 3.3e-39 166.0 137 54.0
CANSAT25G2561 Cannabis sativa HOM05D007078 ORTHO05D008745 3.3e-39 166.0 156 51.9
Mapoly0037s0112 Marchantia polymorpha HOM05D007078 ORTHO05D008745 3.3e-39 166.0 186 44.6
Rhsim13G0021200 Rhododendron simsii HOM05D005701 ORTHO05D007058 3.3e-39 166.0 162 46.9
vmacro02537 Vaccinium macrocarpon HOM05D007078 ORTHO05D008745 3.3e-39 166.0 165 47.9
CBR_g32237 Chara braunii HOM05D007078 ORTHO05D008745 4.4e-39 165.6 137 52.6
ECA247G1342 Erigeron canadensis HOM05D007078 ORTHO05D008745 5.7e-39 165.2 166 51.2
Atru.chr5.1330 Acer truncatum HOM05D007078 ORTHO05D008745 7.5e-39 164.9 152 53.3
Nitab4.5_0001436g0040 Nicotiana tabacum HOM05D007078 ORTHO05D008745 7.5e-39 164.9 157 51.0
FAN24G3201 Fragaria x ananassa HOM05D007078 ORTHO05D008745 9.7e-39 164.5 144 54.2
Sabra14G0103700 Salix brachista HOM05D007078 ORTHO05D008745 9.7e-39 164.5 155 49.7
FAN15G0223 Fragaria x ananassa HOM05D007078 ORTHO05D008745 1.3e-38 164.1 141 56.0
MD11G1292300 Malus domestica HOM05D007078 ORTHO05D008745 1.7e-38 163.7 143 54.5
MD03G1271700 Malus domestica HOM05D007078 ORTHO05D008745 2.8e-38 162.9 164 49.4
Solyc05g055850.3 Solanum lycopersicum HOM05D007078 ORTHO05D008745 4.8e-38 162.2 164 51.2
Sopen05g034250 Solanum pennellii HOM05D007078 ORTHO05D008745 6.3e-38 161.8 164 51.2
Lalb_Chr01g0020251 Lupinus albus HOM05D007078 ORTHO05D008745 1.1e-37 161.0 193 44.6
Os05g0404400 Oryza sativa ssp. japonica HOM05D007078 ORTHO05D008745 1.1e-37 161.0 139 52.5
PRCOL_00000964 Prasinoderma coloniale HOM05D007078 ORTHO05D008745 1.4e-37 160.6 154 51.9
PGR142G0265 Punica granatum HOM05D007078 ORTHO05D008745 2.4e-37 159.8 144 50.7
HanXRQChr15g0466581 Helianthus annuus HOM05D007078 ORTHO05D008745 3.1e-37 159.5 184 45.7
Aa31LG1G29480 Aethionema arabicum HOM05D007078 ORTHO05D008745 4.1e-37 159.1 125 56.8
Ah.08g209880 Amaranthus hybridus HOM05D007078 ORTHO05D008745 5.3e-37 158.7 129 55.0
AUR62006322 Chenopodium quinoa HOM05D007078 ORTHO05D008745 2.0e-36 156.8 132 53.8
Carub.0004s3077 Capsella rubella HOM05D007078 ORTHO05D008745 4.5e-36 155.6 134 51.5
AUR62026362 Chenopodium quinoa HOM05D007078 ORTHO05D008745 4.5e-36 155.6 122 57.4
Oeu006229.1 Olea europaea HOM05D007078 ORTHO05D008745 1.1e-26 124.4 89 59.6
CDE01G0430 Ceratophyllum demersum HOM05D007078 ORTHO05D008745 2.5e-26 123.2 89 60.7
ClCG09G006760 Citrullus lanatus HOM05D007078 ORTHO05D008745 1.8e-21 107.1 89 53.9
HPP92_019174 Vanilla planifolia HOM05D007078 ORTHO05D008745 1.8e-21 107.1 86 59.3
MBI19_g21637_MAGBIO Magnolia biondii HOM05D007078 ORTHO05D008745 4.1e-21 105.9 155 39.4
Gohir.A08G070800 Gossypium hirsutum HOM05D007078 ORTHO05D008745 5.9e-20 102.1 85 54.1
Ca_08589_v3 Cicer arietinum L. HOM05D007078 ORTHO05D008745 7.7e-20 101.7 94 48.9
Zm00001eb287740 Zea mays HOM05D007078 ORTHO05D008745 1.3e-19 100.9 97 48.5
SEGI_07843 Sequoiadendron giganteum HOM05D007078 ORTHO05D008745 2.9e-19 99.8 88 50.0
Actinidia00723 Actinidia chinensis HOM05D007078 ORTHO05D008745 1.1e-18 97.8 69 59.4
SGA_v2.0_scaffold11G05787 Striga asiatica HOM05D007078 ORTHO05D008745 3.3e-18 96.3 70 61.4
Peaxi162Scf00156g00061 Petunia axillaris HOM05D007078 ORTHO05D008745 2.3e-16 90.1 104 45.2
PGR142G2005 Punica granatum HOM05D007078 ORTHO05D008745 8.3e-14 81.6 78 50.0
Actinidia24309 Actinidia chinensis HOM05D007078 ORTHO05D008745 1.1e-13 81.3 62 54.8
Hma1.2p1_0628F.1_g191770 Hydrangea macrophylla HOM05D007078 ORTHO05D008745 1.6e-12 77.4 56 58.9


User provided reference genes

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