Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cre02.g145000 Chlamydomonas reinhardtii HOM05D000586 ORTHO05D008681 2.4e-136 489.2 316 100.0
THA.LOC104807288 Tarenaya hassleriana HOM05D000586 ORTHO05D008681 1.8e-30 137.5 175 46.9
CBR_g38914 Chara braunii HOM05D000586 ORTHO05D008681 8.2e-28 128.6 166 47.0
SMO337G0057 Selaginella moellendorffii HOM05D000586 ORTHO05D008681 4.1e-27 126.3 155 43.2
AT4G34730 Arabidopsis thaliana HOM05D000586 ORTHO05D008681 9.1e-27 125.2 151 48.3
Ciclev10029227m.g Citrus clementina HOM05D000586 ORTHO05D008681 9.1e-27 125.2 182 43.4
Lalb_Chr16g0391381 Lupinus albus HOM05D000586 ORTHO05D008681 1.2e-26 124.8 132 50.0
AL7G16470 Arabidopsis lyrata HOM05D000586 ORTHO05D008681 1.6e-26 124.4 172 44.8
Carub.0007s0556 Capsella rubella HOM05D000586 ORTHO05D008681 1.6e-26 124.4 172 44.8
Pp3c12_16410 Physcomitrium patens HOM05D000586 ORTHO05D008681 1.6e-26 124.4 153 46.4
AagrBONN_evm.TU.Sc2ySwM_228.435 Anthoceros agrestis HOM05D000586 ORTHO05D008681 2.0e-26 124.0 190 42.1
C07p60740 Brassica napus HOM05D000586 ORTHO05D001010 2.0e-26 124.0 155 46.5
BolC7t46503H Brassica oleracea HOM05D000586 ORTHO05D008681 2.0e-26 124.0 155 46.5
A03p63110 Brassica napus HOM05D000586 ORTHO05D001010 2.6e-26 123.6 154 46.1
BraA03t15387Z Brassica rapa HOM05D000586 ORTHO05D008681 2.6e-26 123.6 154 46.1
CDE01G0237 Ceratophyllum demersum HOM05D000586 ORTHO05D008681 2.6e-26 123.6 168 43.5
FAN20G2293 Fragaria x ananassa HOM05D000586 ORTHO05D008681 3.5e-26 123.2 137 50.4
Sp7g32510 Schrenkiella parvula HOM05D000586 ORTHO05D008681 3.5e-26 123.2 151 47.0
COL.COLO4_10614 Corchorus olitorius HOM05D000586 ORTHO05D008681 4.5e-26 122.9 135 47.4
Zm00001eb377790 Zea mays HOM05D000586 ORTHO05D008681 4.5e-26 122.9 137 48.2
BcaNung04297 Brassica carinata HOM05D000586 ORTHO05D008681 5.9e-26 122.5 139 48.2
BraA01t00363Z Brassica rapa HOM05D000586 ORTHO05D008681 5.9e-26 122.5 139 48.2
CARHR243030 Cardamine hirsuta HOM05D000586 ORTHO05D008681 5.9e-26 122.5 157 45.2
Potri.004G164200 Populus trichocarpa HOM05D000586 ORTHO05D008681 5.9e-26 122.5 160 43.8
PGR042G2570 Punica granatum HOM05D000586 ORTHO05D008681 5.9e-26 122.5 163 46.6
RcHm_v2.0_Chr6g0268531 Rosa chinensis HOM05D000586 ORTHO05D008681 5.9e-26 122.5 166 45.2
FvH4_2g10740 Fragaria vesca HOM05D000586 ORTHO05D008681 7.7e-26 122.1 137 50.4
FAN24G2793 Fragaria x ananassa HOM05D000586 ORTHO05D008681 7.7e-26 122.1 137 50.4
Sabra04G0110300 Salix brachista HOM05D000586 ORTHO05D008681 7.7e-26 122.1 160 43.8
A01p03780 Brassica napus HOM05D000586 ORTHO05D003356 1.0e-25 121.7 173 43.9
Cpa.g.sc150.2 Carica papaya HOM05D000586 ORTHO05D008681 1.0e-25 121.7 141 48.2
arahy.Tifrunner.gnm1.ann1.I5P0FU Arachis hypogaea HOM05D000586 ORTHO05D008681 1.3e-25 121.3 192 40.1
Thhalv10026220m.g Eutrema salsugineum HOM05D000586 ORTHO05D008681 1.3e-25 121.3 170 44.7
Lj1g0002953 Lotus japonicus HOM05D000586 ORTHO05D008681 1.3e-25 121.3 139 48.2
Aa31LG2G15790 Aethionema arabicum HOM05D000586 ORTHO05D008681 1.7e-25 120.9 161 46.0
arahy.Tifrunner.gnm1.ann1.89FNHL Arachis hypogaea HOM05D000586 ORTHO05D008681 1.7e-25 120.9 192 39.6
Glyma.06G007300 Glycine max HOM05D000586 ORTHO05D008681 1.7e-25 120.9 160 42.5
Phvul.009G002100 Phaseolus vulgaris HOM05D000586 ORTHO05D008681 1.7e-25 120.9 159 44.0
Sed0014971 Sechium edule HOM05D000586 ORTHO05D008681 1.7e-25 120.9 183 42.6
BcaNung00666 Brassica carinata HOM05D000586 ORTHO05D008681 2.2e-25 120.6 177 42.4
C01p04060 Brassica napus HOM05D000586 ORTHO05D003356 2.2e-25 120.6 177 42.4
Nitab4.5_0002096g0050 Nicotiana tabacum HOM05D000586 ORTHO05D008681 2.2e-25 120.6 126 50.0
Thecc.02G073100 Theobroma cacao HOM05D000586 ORTHO05D008681 2.2e-25 120.6 165 42.4
BolC1t00397H Brassica oleracea HOM05D000586 ORTHO05D003356 2.9e-25 120.2 177 42.4
HanXRQChr10g0294191 Helianthus annuus HOM05D000586 ORTHO05D008681 2.9e-25 120.2 142 47.2
Duzib052G0483 Durio zibethinus HOM05D000586 ORTHO05D008681 3.8e-25 119.8 133 47.4
FAN15G3000 Fragaria x ananassa HOM05D000586 ORTHO05D008681 3.8e-25 119.8 136 50.0
PSO170G6416 Papaver somniferum HOM05D000586 ORTHO05D008681 3.8e-25 119.8 148 46.6
Ca_15328_v3 Cicer arietinum L. HOM05D000586 ORTHO05D008681 5.0e-25 119.4 131 48.1
ClCG11G003770 Citrullus lanatus HOM05D000586 ORTHO05D008681 5.0e-25 119.4 128 50.0
Os06g0137600 Oryza sativa ssp. japonica HOM05D000586 ORTHO05D008681 5.0e-25 119.4 174 43.7
Manes.11G092006 Manihot esculenta HOM05D000586 ORTHO05D008681 6.5e-25 119.0 171 44.4
Medtr3g117600 Medicago truncatula HOM05D000586 ORTHO05D008681 6.5e-25 119.0 178 37.6
PSO210G2611 Papaver somniferum HOM05D000586 ORTHO05D008681 6.5e-25 119.0 148 46.6
Peaxi162Scf00362g01176 Petunia axillaris HOM05D000586 ORTHO05D008681 6.5e-25 119.0 128 49.2
VMungo1309G1236 Vigna mungo HOM05D000586 ORTHO05D008681 6.5e-25 119.0 159 43.4
Aqoxy5G01445 Aquilegia oxysepala HOM05D000586 ORTHO05D008681 8.5e-25 118.6 170 43.5
MSTRG.20023 Avicennia marina HOM05D000586 ORTHO05D008681 8.5e-25 118.6 156 42.9
CiPaw.05G074600 Carya illinoinensis HOM05D000586 ORTHO05D008681 8.5e-25 118.6 172 42.4
Oeu020677.1 Olea europaea HOM05D000586 ORTHO05D008681 8.5e-25 118.6 128 50.0
SalBow6G4654 Salvia bowleyana HOM05D000586 ORTHO05D008681 8.5e-25 118.6 136 47.8
PGSC0003DMG400001616 Solanum tuberosum HOM05D000586 ORTHO05D008681 8.5e-25 118.6 126 49.2
CANSAT11G1696 Cannabis sativa HOM05D000586 ORTHO05D008681 1.1e-24 118.2 128 50.0
CAN.G1329.7 Capsicum annuum HOM05D000586 ORTHO05D008681 1.1e-24 118.2 170 42.4
vmacro02046 Vaccinium macrocarpon HOM05D000586 ORTHO05D008681 1.1e-24 118.2 122 51.6
vmacro22695 Vaccinium macrocarpon HOM05D000586 ORTHO05D008681 1.1e-24 118.2 122 51.6
Migut.B00127 Erythranthe guttata HOM05D000586 ORTHO05D008681 1.5e-24 117.9 139 45.3
Gohir.D13G090500 Gossypium hirsutum HOM05D000586 ORTHO05D008681 1.5e-24 117.9 149 44.3
Gorai.001G244200 Gossypium raimondii HOM05D000586 ORTHO05D008681 1.5e-24 117.9 149 44.3
MCO15G163 Micromonas commoda HOM05D000586 ORTHO05D008681 1.5e-24 117.9 176 42.6
Nitab4.5_0010885g0020 Nicotiana tabacum HOM05D000586 ORTHO05D008681 1.5e-24 117.9 154 42.9
Prupe.8G082300 Prunus persica HOM05D000586 ORTHO05D008681 1.5e-24 117.9 137 47.4
EL10Ac9g21609 Beta vulgaris HOM05D000586 ORTHO05D008681 1.9e-24 117.5 164 40.9
Haze_02225 Corylus avellana HOM05D000586 ORTHO05D008681 1.9e-24 117.5 152 45.4
Hma1.2p1_0032F.1_g019990 Hydrangea macrophylla HOM05D000586 ORTHO05D008681 1.9e-24 117.5 122 51.6
Lj9A383T66 Lonicera japonica HOM05D000586 ORTHO05D008681 1.9e-24 117.5 142 45.8
Psat5g000280 Pisum sativum HOM05D000586 ORTHO05D008681 1.9e-24 117.5 133 46.6
Rhsim11G0184900 Rhododendron simsii HOM05D000586 ORTHO05D008681 1.9e-24 117.5 136 47.8
Actinidia20476 Actinidia chinensis HOM05D000586 ORTHO05D008681 2.5e-24 117.1 163 42.9
Ah.01g018630 Amaranthus hybridus HOM05D000586 ORTHO05D008681 2.5e-24 117.1 164 39.6
Lsat_1_v5_gn_4_67621 Lactuca sativa HOM05D000586 ORTHO05D008681 2.5e-24 117.1 149 44.3
MD00G1066800 Malus domestica HOM05D000586 ORTHO05D008681 2.5e-24 117.1 198 40.9
Solyc01g110550.3 Solanum lycopersicum HOM05D000586 ORTHO05D008681 2.5e-24 117.1 139 46.0
Sopen01g052670 Solanum pennellii HOM05D000586 ORTHO05D008681 2.5e-24 117.1 139 46.0
CsaV3_2G015360 Cucumis sativus L. HOM05D000586 ORTHO05D008681 3.2e-24 116.7 139 46.0
Dinv41988 Davidia involucrata HOM05D000586 ORTHO05D008681 3.2e-24 116.7 160 43.1
QL11p046751 Quercus lobata HOM05D000586 ORTHO05D008681 3.2e-24 116.7 152 45.4
HPP92_020672 Vanilla planifolia HOM05D000586 ORTHO05D008681 3.2e-24 116.7 139 46.8
Nn6g32309 Nelumbo nucifera HOM05D000586 ORTHO05D008681 5.5e-24 115.9 135 46.7
Hund06294 Selenicereus undatus HOM05D000586 ORTHO05D008681 5.5e-24 115.9 137 43.8
VMungo1309G1424 Vigna mungo HOM05D000586 ORTHO05D008681 5.5e-24 115.9 116 52.6
Lj9A385G33 Lonicera japonica HOM05D000586 ORTHO05D008681 7.2e-24 115.5 132 47.7
MBI05_g26502_MAGBIO Magnolia biondii HOM05D000586 ORTHO05D008681 7.2e-24 115.5 175 40.0
AUR62010365 Chenopodium quinoa HOM05D000586 ORTHO05D008681 9.4e-24 115.2 133 45.9
Dinv23444 Davidia involucrata HOM05D000586 ORTHO05D008681 1.2e-23 114.8 138 45.7
Eucgr.G01743 Eucalyptus grandis HOM05D000586 ORTHO05D008681 2.1e-23 114.0 130 46.2
AUR62016853 Chenopodium quinoa HOM05D000586 ORTHO05D008681 2.7e-23 113.6 137 44.5
Mapoly0005s0278 Marchantia polymorpha HOM05D000586 ORTHO05D008681 4.7e-23 112.8 140 45.0
TAR381G1606 Trochodendron aralioides HOM05D000586 ORTHO05D008681 6.1e-23 112.5 196 38.3
DCAR_022927 Daucus carota HOM05D000586 ORTHO05D008681 8.0e-23 112.1 139 46.0
Sc08g0000980 Simmondsia chinensis HOM05D000586 ORTHO05D008681 4.0e-22 109.8 139 43.9
unitig_60.g25431 Utricularia gibba HOM05D000586 ORTHO05D008681 1.2e-21 108.2 147 43.5
ECA234G3975 Erigeron canadensis HOM05D000586 ORTHO05D008681 2.6e-21 107.1 125 47.2
MELO3C020750.2 Cucumis melo HOM05D000586 ORTHO05D008681 4.8e-20 102.8 162 40.7
Cc02_g16800 Coffea canephora HOM05D000586 ORTHO05D008681 2.7e-18 97.1 134 41.8
GSVIVG01024154001 Vitis vinifera HOM05D000586 ORTHO05D008681 1.1e-16 91.7 110 46.4
Oeu046110.1 Olea europaea HOM05D000586 ORTHO05D008681 7.2e-16 89.0 94 50.0
Gohir.A13G086800 Gossypium hirsutum HOM05D000586 ORTHO05D008681 2.1e-15 87.4 164 35.4
SGA_v2.0_scaffold58G20435 Striga asiatica HOM05D000586 ORTHO05D008681 4.7e-15 86.3 243 30.9
PRCOL_00004217 Prasinoderma coloniale HOM05D000586 ORTHO05D008681 8.0e-15 85.5 165 35.2
Duzib132G1196 Durio zibethinus HOM05D000586 ORTHO05D008681 4.0e-14 83.2 156 32.7
TPR.G32182 Trifolium pratense HOM05D000586 ORTHO05D008681 4.0e-14 83.2 109 42.2
SEGI_30788 Sequoiadendron giganteum HOM05D000586 ORTHO05D008681 4.5e-10 69.7 94 39.4
CSS0047409 Camellia sinensis var. sinensis HOM05D000586 ORTHO05D008681 2.5e-08 63.9 101 37.6
ATR0910G002 Amborella trichopoda HOM05D000586 ORTHO05D008681 2.1e-07 60.8 79 36.7
Sed0014045 Sechium edule HOM05D000586 ORTHO05D008681 3.6e-07 60.1 94 41.5
BcaB07g33434 Brassica carinata HOM05D000586 ORTHO05D008681 6.1e-07 59.3 68 48.5
Nn017s41473 Nelumbo nucifera HOM05D000586 ORTHO05D008681 2.3e-06 57.4 62 50.0


User provided reference genes

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