Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cre02.g143400 Chlamydomonas reinhardtii HOM05D008760 ORTHO05D010788 0.0e+00 2147.1 1224 100.0
Cre02.g143500 Chlamydomonas reinhardtii HOM05D008760 ORTHO05D010788 6.0e-276 954.9 1693 43.4
Cre02.g143350 Chlamydomonas reinhardtii HOM05D008760 ORTHO05D010788 1.1e-264 917.5 1255 49.6
Cre06.g289400 Chlamydomonas reinhardtii HOM05D008760 ORTHO05D010788 2.7e-212 743.4 1398 40.2
Cre01.g015200 Chlamydomonas reinhardtii HOM05D008760 ORTHO05D010788 5.7e-202 709.1 1381 39.7
Cre13.g564766 Chlamydomonas reinhardtii HOM05D008760 ORTHO05D010788 9.8e-202 708.4 1355 40.2
Cre03.g204689 Chlamydomonas reinhardtii HOM05D008760 ORTHO05D010788 2.7e-196 690.3 1250 41.1
Cre16.g664200 Chlamydomonas reinhardtii HOM05D008760 ORTHO05D010788 1.2e-191 674.9 1257 38.5
Cre14.g617700 Chlamydomonas reinhardtii HOM05D008760 ORTHO05D010788 4.5e-191 672.9 1163 40.1
Cre02.g109100 Chlamydomonas reinhardtii HOM05D008760 ORTHO05D010788 2.1e-188 664.1 1394 38.1
Cre13.g567400 Chlamydomonas reinhardtii HOM05D008760 ORTHO05D010788 2.3e-182 644.0 1310 39.3
Cre16.g664150 Chlamydomonas reinhardtii HOM05D008760 ORTHO05D010788 2.5e-181 640.6 1395 37.1
Cre14.g617750 Chlamydomonas reinhardtii HOM05D008760 ORTHO05D010788 1.4e-171 608.2 1605 34.6
Cre02.g119850 Chlamydomonas reinhardtii HOM05D008760 ORTHO05D010788 9.9e-162 575.5 1506 35.1
Cre09.g389875 Chlamydomonas reinhardtii HOM05D008760 ORTHO05D010788 1.0e-150 538.9 1349 34.3
Cre14.g617650 Chlamydomonas reinhardtii HOM05D008760 ORTHO05D010788 2.5e-149 534.3 1627 30.6
Cre11.g467673 Chlamydomonas reinhardtii HOM05D008760 ORTHO05D010788 4.9e-129 466.8 1425 32.6
Cre11.g468100 Chlamydomonas reinhardtii HOM05D008760 ORTHO05D010788 4.9e-129 466.8 445 56.9
Cre10.g454900 Chlamydomonas reinhardtii HOM05D008760 ORTHO05D010788 3.5e-127 460.7 1555 33.2
Cre12.g499300 Chlamydomonas reinhardtii HOM05D008760 ORTHO05D010788 8.2e-124 449.5 374 60.7
Cre12.g499250 Chlamydomonas reinhardtii HOM05D008760 ORTHO05D010788 1.4e-123 448.7 372 61.3
Cre02.g114100 Chlamydomonas reinhardtii HOM05D008760 ORTHO05D010788 2.0e-122 444.9 434 55.5
Cre12.g559400 Chlamydomonas reinhardtii HOM05D008760 ORTHO05D010788 3.3e-101 374.4 1681 29.7
Cre02.g141786 Chlamydomonas reinhardtii HOM05D008760 ORTHO05D010788 7.2e-96 356.7 1229 30.1
Cre12.g557500 Chlamydomonas reinhardtii HOM05D008760 ORTHO05D010788 4.4e-93 347.4 521 41.1
Cre13.g590600 Chlamydomonas reinhardtii HOM05D008760 ORTHO05D010788 1.6e-90 339.0 491 41.5
Cre12.g509550 Chlamydomonas reinhardtii HOM05D008760 ORTHO05D010788 2.7e-79 301.6 360 45.0
Cre07.g342350 Chlamydomonas reinhardtii HOM05D008760 ORTHO05D010788 6.8e-78 297.0 355 44.2
PRCOL_00000919 Prasinoderma coloniale HOM05D008760 ORTHO05D010788 8.9e-46 190.3 330 35.5
Mapoly0068s0004 Marchantia polymorpha HOM05D021506 ORTHO05D010788 6.6e-41 174.1 356 33.1
CBR_g16833 Chara braunii HOM05D021506 ORTHO05D010788 2.0e-37 162.5 356 31.7
Cre13.g603000 Chlamydomonas reinhardtii HOM05D008760 ORTHO05D010788 3.8e-36 158.3 320 30.9
PRCOL_00005603 Prasinoderma coloniale HOM05D008760 ORTHO05D010788 6.4e-36 157.5 345 32.5
Pp3c8_21740 Physcomitrium patens HOM05D021506 ORTHO05D010788 2.1e-34 152.5 363 29.2
MCO11G620 Micromonas commoda HOM05D008760 ORTHO05D010788 1.8e-30 139.4 374 30.2
PRCOL_00007251 Prasinoderma coloniale HOM05D008760 ORTHO05D010788 1.8e-30 139.4 294 30.6
Cre14.g616550 Chlamydomonas reinhardtii HOM05D007959 ORTHO05D011124 6.4e-28 131.0 390 27.4
Cre05.g236650 Chlamydomonas reinhardtii HOM05D007959 ORTHO05D011124 1.9e-27 129.4 341 31.4
MCO15G540 Micromonas commoda HOM05D008760 ORTHO05D010788 2.4e-27 129.0 361 28.5
Cre13.g605100 Chlamydomonas reinhardtii HOM05D008760 ORTHO05D010788 7.1e-27 127.5 343 28.3
Cre07.g316650 Chlamydomonas reinhardtii HOM05D000320 ORTHO05D143727 2.1e-26 125.9 329 28.9
MCO11G742 Micromonas commoda HOM05D008760 ORTHO05D010788 3.9e-25 121.7 301 32.2
Cre09.g387200 Chlamydomonas reinhardtii HOM05D007959 ORTHO05D011124 1.1e-24 120.2 347 26.8
Cre12.g547351 Chlamydomonas reinhardtii HOM05D007959 ORTHO05D011124 1.1e-24 120.2 348 27.3
Cre14.g616450 Chlamydomonas reinhardtii HOM05D007959 ORTHO05D011124 2.5e-24 119.0 382 26.2
Cre13.g574300 Chlamydomonas reinhardtii HOM05D000320 ORTHO05D000830 4.0e-22 111.7 336 26.5
MCO15G244 Micromonas commoda HOM05D008760 ORTHO05D268264 9.0e-22 110.5 350 28.6
Cre07.g348650 Chlamydomonas reinhardtii HOM05D007959 ORTHO05D011124 2.6e-21 109.0 357 25.8
Cre09.g387350 Chlamydomonas reinhardtii HOM05D007959 ORTHO05D011124 4.2e-19 101.7 344 25.9
PRCOL_00006923 Prasinoderma coloniale HOM05D008760 ORTHO05D010788 5.5e-19 101.3 336 26.5
Cre11.g479000 Chlamydomonas reinhardtii HOM05D007959 ORTHO05D011124 7.1e-19 100.9 403 26.3
MCO04G515 Micromonas commoda HOM05D008760 ORTHO05D268499 9.3e-19 100.5 358 26.3
Cre02.g141766 Chlamydomonas reinhardtii HOM05D008760 ORTHO05D146548 4.6e-18 98.2 221 34.8
Cfa022366 Carpinus fangiana HOM05D008760 ORTHO05D010788 7.9e-18 97.4 241 32.0
Cre13.g574250 Chlamydomonas reinhardtii HOM05D000320 ORTHO05D144216 1.3e-17 96.7 341 26.1
Cre13.g574350 Chlamydomonas reinhardtii HOM05D000320 ORTHO05D000830 6.7e-17 94.4 316 26.3
Cre09.g388650 Chlamydomonas reinhardtii HOM05D007959 ORTHO05D011124 3.4e-13 82.0 291 23.7
Cre09.g413400 Chlamydomonas reinhardtii HOM05D000088 ORTHO05D144924 1.7e-12 79.7 359 21.4
Cre02.g080550 Chlamydomonas reinhardtii HOM05D000062 ORTHO05D010788 3.8e-12 78.6 365 25.2
Cre02.g085100 Chlamydomonas reinhardtii HOM05D007959 ORTHO05D011124 3.9e-09 68.6 248 23.0
PRCOL_00006927 Prasinoderma coloniale HOM05D008760 ORTHO05D010788 3.9e-09 68.6 285 29.1
Cre05.g237800 Chlamydomonas reinhardtii HOM05D007959 ORTHO05D011124 9.7e-08 63.9 138 33.3


User provided reference genes

Program Settings