Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cre02.g143307 Chlamydomonas reinhardtii HOM05D000422 ORTHO05D139001 5.8e-22 106.7 55 100.0
Pp3c25_7180 Physcomitrium patens HOM05D000422 ORTHO05D001248 6.3e-08 60.1 57 56.1
PRCOL_00002464 Prasinoderma coloniale HOM05D000422 ORTHO05D001248 1.4e-07 58.9 54 59.3
Pp3c6_7360 Physcomitrium patens HOM05D000422 ORTHO05D001248 1.8e-07 58.5 57 56.1
Pp3c16_17640 Physcomitrium patens HOM05D000422 ORTHO05D001248 2.4e-07 58.2 57 54.4
Pp3c5_23010 Physcomitrium patens HOM05D000422 ORTHO05D001248 2.4e-07 58.2 57 54.4
CBR_g8305 Chara braunii HOM05D000422 ORTHO05D001248 1.2e-06 55.8 57 57.9
Rhsim12G0180500 Rhododendron simsii HOM05D000422 ORTHO05D001248 1.2e-06 55.8 38 65.8
Mapoly0113s0004 Marchantia polymorpha HOM05D000422 ORTHO05D001248 1.5e-06 55.5 57 52.6
SGA_v2.0_scaffold142G35654 Striga asiatica HOM05D000422 ORTHO05D001248 1.5e-06 55.5 50 52.0
ClCG03G001710 Citrullus lanatus HOM05D000422 ORTHO05D001248 2.0e-06 55.1 50 52.0
AL5G28380 Arabidopsis lyrata HOM05D000422 ORTHO05D001248 2.6e-06 54.7 44 59.1
Manes.14G045700 Manihot esculenta HOM05D000422 ORTHO05D001248 3.4e-06 54.3 38 65.8
MSTRG.4638 Avicennia marina HOM05D000422 ORTHO05D001248 4.5e-06 53.9 53 50.9
MBI11_g11870_MAGBIO Magnolia biondii HOM05D000422 ORTHO05D001248 4.5e-06 53.9 38 63.2
PSO478G5088 Papaver somniferum HOM05D000422 ORTHO05D001248 4.5e-06 53.9 53 54.7
Migut.I00611 Erythranthe guttata HOM05D000422 ORTHO05D001248 5.9e-06 53.5 50 52.0
Lsat_1_v5_gn_5_15861 Lactuca sativa HOM05D000422 ORTHO05D001248 5.9e-06 53.5 54 51.9
Nn3g16302 Nelumbo nucifera HOM05D000422 ORTHO05D001248 5.9e-06 53.5 40 60.0
Pp3c3_18360 Physcomitrium patens HOM05D000422 ORTHO05D001248 5.9e-06 53.5 57 54.4
SEGI_38718 Sequoiadendron giganteum HOM05D000422 ORTHO05D001248 5.9e-06 53.5 40 57.5
Sopen03g037240 Solanum pennellii HOM05D000422 ORTHO05D001248 5.9e-06 53.5 53 52.8
vmacro16750 Vaccinium macrocarpon HOM05D000422 ORTHO05D001248 5.9e-06 53.5 45 53.3
AagrBONN_evm.TU.Sc2ySwM_344.2914 Anthoceros agrestis HOM05D000422 ORTHO05D001248 7.7e-06 53.1 56 51.8
CAN.G521.3 Capsicum annuum HOM05D000422 ORTHO05D001248 7.7e-06 53.1 38 63.2
CAN.G843.23 Capsicum annuum HOM05D000422 ORTHO05D001248 7.7e-06 53.1 38 63.2
Nitab4.5_0000663g0180 Nicotiana tabacum HOM05D000422 ORTHO05D001248 7.7e-06 53.1 38 63.2
Nitab4.5_0002450g0030 Nicotiana tabacum HOM05D000422 ORTHO05D001248 7.7e-06 53.1 38 63.2
Nitab4.5_0003119g0020 Nicotiana tabacum HOM05D000422 ORTHO05D001248 7.7e-06 53.1 38 63.2
Nitab4.5_0009686g0040 Nicotiana tabacum HOM05D000422 ORTHO05D001248 7.7e-06 53.1 38 63.2
Peaxi162Scf00314g00528 Petunia axillaris HOM05D000422 ORTHO05D001248 7.7e-06 53.1 38 63.2
Peaxi162Scf01168g00111 Petunia axillaris HOM05D000422 ORTHO05D001248 7.7e-06 53.1 38 63.2
Solyc03g118340.3 Solanum lycopersicum HOM05D000422 ORTHO05D001248 7.7e-06 53.1 38 63.2
PGSC0003DMG400014248 Solanum tuberosum HOM05D000422 ORTHO05D001248 7.7e-06 53.1 38 63.2
PGSC0003DMG402014476 Solanum tuberosum HOM05D000422 ORTHO05D001248 7.7e-06 53.1 38 63.2
THA.LOC104811561 Tarenaya hassleriana HOM05D000422 ORTHO05D001248 7.7e-06 53.1 54 51.9
TAR622G0976 Trochodendron aralioides HOM05D000422 ORTHO05D001248 7.7e-06 53.1 38 65.8
Aqoxy3G01886 Aquilegia oxysepala HOM05D000422 ORTHO05D001248 1.0e-05 52.8 38 63.2
Lsat_1_v5_gn_1_27961 Lactuca sativa HOM05D000422 ORTHO05D001248 1.0e-05 52.8 53 49.1
Manes.06G125800 Manihot esculenta HOM05D000422 ORTHO05D001248 1.0e-05 52.8 38 63.2
Nn4g22167 Nelumbo nucifera HOM05D000422 ORTHO05D001248 1.0e-05 52.8 38 60.5


User provided reference genes

Program Settings