Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cre02.g142150 Chlamydomonas reinhardtii HOM05D005137 ORTHO05D006478 3.1e-83 312.0 185 100.0
Pp3c12_6500 Physcomitrium patens HOM05D005137 ORTHO05D006478 7.9e-31 137.9 151 41.7
AagrBONN_evm.TU.Sc2ySwM_117.1441 Anthoceros agrestis HOM05D005137 ORTHO05D006478 1.1e-29 134.0 151 45.7
SEGI_32859 Sequoiadendron giganteum HOM05D005137 ORTHO05D006478 8.2e-28 127.9 151 43.0
SEGI_32911 Sequoiadendron giganteum HOM05D005137 ORTHO05D006478 8.2e-28 127.9 151 43.0
Lsat_1_v5_gn_1_53501 Lactuca sativa HOM05D005137 ORTHO05D006478 1.1e-27 127.5 126 49.2
PSO210G7193 Papaver somniferum HOM05D005137 ORTHO05D006478 1.8e-27 126.7 126 49.2
HanXRQChr01g0027021 Helianthus annuus HOM05D005137 ORTHO05D006478 4.1e-27 125.6 129 49.6
Medtr3g078663 Medicago truncatula HOM05D005137 ORTHO05D006478 7.0e-27 124.8 118 52.5
ECA248G1561 Erigeron canadensis HOM05D005137 ORTHO05D006478 9.1e-27 124.4 126 48.4
Peaxi162Scf00020g02234 Petunia axillaris HOM05D005137 ORTHO05D006478 9.1e-27 124.4 156 42.9
PSO238G0018 Papaver somniferum HOM05D005137 ORTHO05D006478 1.6e-26 123.6 126 49.2
Mapoly0118s0004 Marchantia polymorpha HOM05D005137 ORTHO05D006478 2.6e-26 122.9 151 41.7
Lalb_Chr01g0009971 Lupinus albus HOM05D005137 ORTHO05D006478 3.5e-26 122.5 151 43.7
ATR0584G018 Amborella trichopoda HOM05D005137 ORTHO05D006478 1.0e-25 120.9 156 42.9
Cc10_g11140 Coffea canephora HOM05D005137 ORTHO05D006478 1.3e-25 120.6 158 44.3
Ca_16220_v3 Cicer arietinum L. HOM05D005137 ORTHO05D006478 1.7e-25 120.2 156 43.6
DCAR_006419 Daucus carota HOM05D005137 ORTHO05D006478 1.7e-25 120.2 158 43.0
Glyma.02G074600 Glycine max HOM05D005137 ORTHO05D006478 1.7e-25 120.2 156 44.2
Glyma.16G156600 Glycine max HOM05D005137 ORTHO05D006478 2.2e-25 119.8 156 44.9
Sabra13G0097100 Salix brachista HOM05D005137 ORTHO05D006478 2.2e-25 119.8 126 49.2
VMungo0464G1968 Vigna mungo HOM05D005137 ORTHO05D006478 2.2e-25 119.8 156 43.6
CiPaw.15G082700 Carya illinoinensis HOM05D005137 ORTHO05D006478 2.9e-25 119.4 156 44.9
SalBow6G2431 Salvia bowleyana HOM05D005137 ORTHO05D006478 3.8e-25 119.0 126 46.8
SalBow6G5561 Salvia bowleyana HOM05D005137 ORTHO05D006478 3.8e-25 119.0 126 46.8
CANSAT25G3131 Cannabis sativa HOM05D005137 ORTHO05D006478 5.0e-25 118.6 117 50.4
Lj1g0006567 Lotus japonicus HOM05D005137 ORTHO05D006478 5.0e-25 118.6 118 50.0
Sopen08g021770 Solanum pennellii HOM05D005137 ORTHO05D006478 5.0e-25 118.6 118 50.0
PGSC0003DMG400033629 Solanum tuberosum HOM05D005137 ORTHO05D006478 5.0e-25 118.6 118 50.0
CAN.G623.4 Capsicum annuum HOM05D005137 ORTHO05D006478 6.5e-25 118.2 118 50.0
Lalb_Chr03g0035851 Lupinus albus HOM05D005137 ORTHO05D006478 6.5e-25 118.2 156 43.6
Solyc08g067830.3 Solanum lycopersicum HOM05D005137 ORTHO05D006478 6.5e-25 118.2 118 50.0
Phvul.004G084500 Phaseolus vulgaris HOM05D005137 ORTHO05D006478 1.5e-24 117.1 156 42.3
Prupe.8G054100 Prunus persica HOM05D005137 ORTHO05D006478 1.5e-24 117.1 151 42.4
arahy.Tifrunner.gnm1.ann1.UQ6TGS Arachis hypogaea HOM05D005137 ORTHO05D006478 1.9e-24 116.7 156 43.6
Potri.019G085500 Populus trichocarpa HOM05D005137 ORTHO05D006478 1.9e-24 116.7 156 42.9
arahy.Tifrunner.gnm1.ann1.RF3N8D Arachis hypogaea HOM05D005137 ORTHO05D006478 2.5e-24 116.3 118 50.0
Psat5g109360 Pisum sativum HOM05D005137 ORTHO05D006478 2.5e-24 116.3 118 49.2
Sc01g0001710 Simmondsia chinensis HOM05D005137 ORTHO05D006478 2.5e-24 116.3 118 51.7
Cfa018205 Carpinus fangiana HOM05D005137 ORTHO05D006478 3.2e-24 115.9 156 41.7
Migut.N03340 Erythranthe guttata HOM05D005137 ORTHO05D006478 3.2e-24 115.9 151 41.7
MD10G1046500 Malus domestica HOM05D005137 ORTHO05D006478 3.2e-24 115.9 125 46.4
Potri.013G114800 Populus trichocarpa HOM05D005137 ORTHO05D006478 4.2e-24 115.5 156 43.6
TWI32G0414 Tripterygium wilfordii HOM05D005137 ORTHO05D006478 4.2e-24 115.5 118 49.2
Glyma.09G166500 Glycine max HOM05D005137 ORTHO05D006478 5.5e-24 115.2 156 42.9
Oeu039592.1 Olea europaea HOM05D005137 ORTHO05D006478 5.5e-24 115.2 151 41.1
Sed0020054 Sechium edule HOM05D005137 ORTHO05D006478 7.2e-24 114.8 156 40.4
Hund16805 Selenicereus undatus HOM05D005137 ORTHO05D006478 7.2e-24 114.8 118 49.2
THA.LOC104806781 Tarenaya hassleriana HOM05D005137 ORTHO05D006478 7.2e-24 114.8 126 47.6
THA.LOC104813096 Tarenaya hassleriana HOM05D005137 ORTHO05D006478 7.2e-24 114.8 118 50.8
Ciclev10002730m.g Citrus clementina HOM05D005137 ORTHO05D006478 9.4e-24 114.4 125 45.6
CSS0031544 Camellia sinensis var. sinensis HOM05D005137 ORTHO05D006478 1.2e-23 114.0 118 49.2
CSS0044586 Camellia sinensis var. sinensis HOM05D005137 ORTHO05D006478 1.2e-23 114.0 118 49.2
Cpa.g.sc66.58 Carica papaya HOM05D005137 ORTHO05D006478 1.2e-23 114.0 151 38.4
Manes.02G220500 Manihot esculenta HOM05D005137 ORTHO05D006478 1.2e-23 114.0 156 41.0
Sp1g29570 Schrenkiella parvula HOM05D005137 ORTHO05D006478 1.2e-23 114.0 126 46.8
HPP92_025038 Vanilla planifolia HOM05D005137 ORTHO05D006478 1.2e-23 114.0 125 44.8
MSTRG.22441 Avicennia marina HOM05D005137 ORTHO05D006478 1.6e-23 113.6 151 40.4
Oeu021007.1 Olea europaea HOM05D005137 ORTHO05D006478 1.6e-23 113.6 118 50.0
TAR628G0708 Trochodendron aralioides HOM05D005137 ORTHO05D006478 1.6e-23 113.6 152 42.8
unitig_52.g17664 Utricularia gibba HOM05D005137 ORTHO05D006478 1.6e-23 113.6 152 41.4
CANSAT64G0780 Cannabis sativa HOM05D005137 ORTHO05D006478 2.1e-23 113.2 117 48.7
CsaV3_2G035870 Cucumis sativus L. HOM05D005137 ORTHO05D006478 2.1e-23 113.2 151 40.4
RcHm_v2.0_Chr6g0272201 Rosa chinensis HOM05D005137 ORTHO05D006478 2.1e-23 113.2 145 42.8
TWI34G1514 Tripterygium wilfordii HOM05D005137 ORTHO05D006478 2.1e-23 113.2 118 47.5
Aqoxy5G03157 Aquilegia oxysepala HOM05D005137 ORTHO05D006478 2.7e-23 112.8 126 44.4
AL1G48900 Arabidopsis lyrata HOM05D005137 ORTHO05D006478 2.7e-23 112.8 118 49.2
PGR004G0411 Punica granatum HOM05D005137 ORTHO05D006478 2.7e-23 112.8 156 38.5
PSO063G4111 Papaver somniferum HOM05D005137 ORTHO05D006478 3.6e-23 112.5 126 43.7
SGA_v2.0_scaffold149G36609 Striga asiatica HOM05D005137 ORTHO05D006478 3.6e-23 112.5 151 39.7
Atru.chr13.1812 Acer truncatum HOM05D005137 ORTHO05D006478 4.7e-23 112.1 118 47.5
Os08g0104100 Oryza sativa ssp. japonica HOM05D005137 ORTHO05D006478 4.7e-23 112.1 126 41.3
AT1G34350 Arabidopsis thaliana HOM05D005137 ORTHO05D006478 6.1e-23 111.7 118 48.3
GSVIVG01023270001 Vitis vinifera HOM05D005137 ORTHO05D006478 6.1e-23 111.7 117 47.9
Duzib177G1119 Durio zibethinus HOM05D005137 ORTHO05D006478 8.0e-23 111.3 156 40.4
Thhalv10008956m.g Eutrema salsugineum HOM05D005137 ORTHO05D006478 8.0e-23 111.3 118 48.3
FvH4_2g12231 Fragaria vesca HOM05D005137 ORTHO05D006478 8.0e-23 111.3 118 48.3
FAN20G1842 Fragaria x ananassa HOM05D005137 ORTHO05D006478 8.0e-23 111.3 118 48.3
C06p11610 Brassica napus HOM05D005137 ORTHO05D006478 1.0e-22 110.9 118 49.2
Dinv41687 Davidia involucrata HOM05D005137 ORTHO05D006478 1.0e-22 110.9 118 47.5
EL10Ac1g00786 Beta vulgaris HOM05D005137 ORTHO05D006478 1.4e-22 110.5 118 47.5
A08p08280 Brassica napus HOM05D005137 ORTHO05D006478 1.4e-22 110.5 118 48.3
Gohir.D05G253100 Gossypium hirsutum HOM05D005137 ORTHO05D006478 1.4e-22 110.5 156 39.7
Hund27077 Selenicereus undatus HOM05D005137 ORTHO05D006478 1.4e-22 110.5 118 46.6
Zm00001eb174480 Zea mays HOM05D005137 ORTHO05D006478 1.4e-22 110.5 119 44.5
BcaC05g27759 Brassica carinata HOM05D005137 ORTHO05D006478 1.8e-22 110.2 126 43.7
BcaC08g43783 Brassica carinata HOM05D005137 ORTHO05D006478 1.8e-22 110.2 118 48.3
C05p37550 Brassica napus HOM05D005137 ORTHO05D006478 1.8e-22 110.2 126 43.7
BolC6t36295H Brassica oleracea HOM05D005137 ORTHO05D006478 1.8e-22 110.2 118 48.3
CSS0049152 Camellia sinensis var. sinensis HOM05D005137 ORTHO05D006478 1.8e-22 110.2 118 47.5
MELO3C024753.2 Cucumis melo HOM05D005137 ORTHO05D006478 1.8e-22 110.2 151 39.7
Eucgr.F04136 Eucalyptus grandis HOM05D005137 ORTHO05D006478 1.8e-22 110.2 118 44.9
Gohir.A05G250700 Gossypium hirsutum HOM05D005137 ORTHO05D006478 2.3e-22 109.8 156 39.7
Nn5g27795 Nelumbo nucifera HOM05D005137 ORTHO05D006478 2.3e-22 109.8 151 38.4
Carub.0001s3248 Capsella rubella HOM05D005137 ORTHO05D006478 3.0e-22 109.4 118 48.3
Gorai.009G263900 Gossypium raimondii HOM05D005137 ORTHO05D006478 3.0e-22 109.4 156 39.1
Aa31LG6G8420 Aethionema arabicum HOM05D005137 ORTHO05D006478 4.0e-22 109.0 165 40.6
BcaB07g33131 Brassica carinata HOM05D005137 ORTHO05D006478 4.0e-22 109.0 118 48.3
BcaB03g13677 Brassica carinata HOM05D005137 ORTHO05D006478 6.7e-22 108.2 126 43.7
FAN27G0578 Fragaria x ananassa HOM05D005137 ORTHO05D006478 6.7e-22 108.2 118 47.5
SMO304G0014 Selaginella moellendorffii HOM05D005137 ORTHO05D006478 6.7e-22 108.2 153 37.3
MD05G1040400 Malus domestica HOM05D005137 ORTHO05D006478 8.8e-22 107.8 125 44.0
AUR62023580 Chenopodium quinoa HOM05D005137 ORTHO05D006478 1.5e-21 107.1 118 45.8
Medtr1g083990 Medicago truncatula HOM05D001444 ORTHO05D006478 2.0e-21 106.7 130 43.8
Thecc.08G201900 Theobroma cacao HOM05D005137 ORTHO05D006478 2.0e-21 106.7 118 44.9
Nitab4.5_0000125g0160 Nicotiana tabacum HOM05D005137 ORTHO05D006478 3.3e-21 105.9 156 40.4
CDE05G2425 Ceratophyllum demersum HOM05D005137 ORTHO05D006478 4.4e-21 105.5 144 39.6
ClCG02G007860 Citrullus lanatus HOM05D005137 ORTHO05D006478 4.4e-21 105.5 156 39.7
Haze_17904 Corylus avellana HOM05D005137 ORTHO05D006478 9.7e-21 104.4 180 36.7
Os05g0432500 Oryza sativa ssp. japonica HOM05D005137 ORTHO05D006478 1.7e-20 103.6 151 34.4
BolC8t47866H Brassica oleracea HOM05D005137 ORTHO05D006478 2.8e-20 102.8 139 42.4
SMO115G0137 Selaginella moellendorffii HOM05D005137 ORTHO05D006478 2.8e-20 102.8 117 41.9
Duzib116G0364 Durio zibethinus HOM05D005137 ORTHO05D006478 1.1e-19 100.9 118 42.4
CARHR033800 Cardamine hirsuta HOM05D005137 ORTHO05D006478 9.1e-19 97.8 95 51.6
BolC5t32496H Brassica oleracea HOM05D005137 ORTHO05D006478 3.5e-18 95.9 153 35.9
BraA08t32846Z Brassica rapa HOM05D005137 ORTHO05D006478 4.5e-18 95.5 147 38.8
MCO05G717 Micromonas commoda HOM05D005137 ORTHO05D006478 4.5e-18 95.5 119 37.0
FAN24G3447 Fragaria x ananassa HOM05D004393 ORTHO05D004897 7.7e-18 94.7 94 50.0
Glyma.16G216600 Glycine max HOM05D005137 ORTHO05D006478 6.1e-15 85.1 109 43.1
Actinidia32879 Actinidia chinensis HOM05D005137 ORTHO05D006478 1.0e-14 84.3 91 47.3
CAN.G21.12 Capsicum annuum HOM05D005137 ORTHO05D006478 1.8e-14 83.6 97 46.4
unitig_62.g23355 Utricularia gibba HOM05D005137 ORTHO05D006478 2.0e-13 80.1 155 34.8
AUR62004663 Chenopodium quinoa HOM05D005137 ORTHO05D006478 2.6e-13 79.7 129 40.3
Lj7P297T42 Lonicera japonica HOM05D005137 ORTHO05D006478 2.2e-12 76.6 75 53.3
QL02p034100 Quercus lobata HOM05D005137 ORTHO05D006478 1.8e-11 73.6 77 48.1
Peaxi162Scf00105g01425 Petunia axillaris HOM05D005137 ORTHO05D006478 2.4e-11 73.2 75 49.3
Nitab4.5_0006579g0080 Nicotiana tabacum HOM05D005137 ORTHO05D006478 1.2e-10 70.9 118 37.3
Rhsim06G0097400 Rhododendron simsii HOM05D005137 ORTHO05D006478 2.7e-10 69.7 73 47.9
COL.COLO4_35446 Corchorus olitorius HOM05D005137 ORTHO05D006478 3.8e-09 65.9 73 47.9
arahy.Tifrunner.gnm1.ann1.T3MISZ Arachis hypogaea HOM05D005137 ORTHO05D006478 4.2e-08 62.4 66 51.5


User provided reference genes

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