Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cre02.g141850 Chlamydomonas reinhardtii HOM05D006957 ORTHO05D008647 1.7e-135 486.1 269 100.0
SGA_v2.0_scaffold4G01906 Striga asiatica HOM05D006957 ORTHO05D008647 3.3e-17 93.2 191 34.0
Sp2g02390 Schrenkiella parvula HOM05D006957 ORTHO05D008647 1.6e-16 90.9 152 36.2
Carub.0002s0276 Capsella rubella HOM05D006957 ORTHO05D008647 2.1e-16 90.5 193 33.7
Thhalv10023639m.g Eutrema salsugineum HOM05D006957 ORTHO05D008647 8.0e-16 88.6 152 34.9
unitig_748.g7953 Utricularia gibba HOM05D006957 ORTHO05D008647 8.0e-16 88.6 121 38.0
AUR62012727 Chenopodium quinoa HOM05D006957 ORTHO05D008647 1.1e-15 88.2 196 31.1
AUR62021927 Chenopodium quinoa HOM05D006957 ORTHO05D008647 1.1e-15 88.2 196 31.1
AT1G62250 Arabidopsis thaliana HOM05D006957 ORTHO05D008647 1.8e-15 87.4 152 34.9
Eucgr.L02772 Eucalyptus grandis HOM05D006957 ORTHO05D008647 2.3e-15 87.0 96 44.8
Potri.011G006700 Populus trichocarpa HOM05D006957 ORTHO05D008647 2.3e-15 87.0 152 34.2
SalBow8G2851 Salvia bowleyana HOM05D006957 ORTHO05D008647 2.3e-15 87.0 152 34.9
SMO347G0662 Selaginella moellendorffii HOM05D006957 ORTHO05D008647 2.3e-15 87.0 157 36.3
BcaC02g10063 Brassica carinata HOM05D006957 ORTHO05D008647 3.1e-15 86.7 97 44.3
BcaC06g31885 Brassica carinata HOM05D006957 ORTHO05D008647 3.1e-15 86.7 152 33.6
BolC4t24891H Brassica oleracea HOM05D006957 ORTHO05D008647 3.1e-15 86.7 97 44.3
THA.LOC104818712 Tarenaya hassleriana HOM05D006957 ORTHO05D008647 3.1e-15 86.7 196 32.1
Actinidia11860 Actinidia chinensis HOM05D006957 ORTHO05D008647 4.0e-15 86.3 161 32.9
AL2G13680 Arabidopsis lyrata HOM05D006957 ORTHO05D008647 4.0e-15 86.3 152 34.2
BcaC02g10501 Brassica carinata HOM05D006957 ORTHO05D008647 4.0e-15 86.3 151 34.4
C04p28180 Brassica napus HOM05D006957 ORTHO05D008647 4.0e-15 86.3 151 34.4
BolC4t24361H Brassica oleracea HOM05D006957 ORTHO05D008647 4.0e-15 86.3 151 34.4
Gohir.D06G155200 Gossypium hirsutum HOM05D006957 ORTHO05D008647 4.0e-15 86.3 97 43.3
QL05p072698 Quercus lobata HOM05D006957 ORTHO05D008647 4.0e-15 86.3 152 34.2
Solyc02g080780.3 Solanum lycopersicum HOM05D006957 ORTHO05D008647 4.0e-15 86.3 192 30.7
Atru.chr10.2253 Acer truncatum HOM05D006957 ORTHO05D008647 5.2e-15 85.9 152 33.6
CAN.G1014.10 Capsicum annuum HOM05D006957 ORTHO05D008647 5.2e-15 85.9 192 31.8
Mapoly0071s0090 Marchantia polymorpha HOM05D006957 ORTHO05D008647 5.2e-15 85.9 192 33.3
Medtr4g132350 Medicago truncatula HOM05D006957 ORTHO05D008647 5.2e-15 85.9 152 33.6
Sopen02g025470 Solanum pennellii HOM05D006957 ORTHO05D008647 5.2e-15 85.9 192 30.7
Migut.M01335 Erythranthe guttata HOM05D006957 ORTHO05D008647 6.8e-15 85.5 152 32.9
Manes.17G025800 Manihot esculenta HOM05D006957 ORTHO05D008647 6.8e-15 85.5 152 32.9
Os03g0744700 Oryza sativa ssp. japonica HOM05D006957 ORTHO05D008647 6.8e-15 85.5 104 40.4
ClCG01G021850 Citrullus lanatus HOM05D006957 ORTHO05D008647 8.9e-15 85.1 195 32.3
COL.COLO4_31796 Corchorus olitorius HOM05D006957 ORTHO05D008647 8.9e-15 85.1 152 33.6
Nitab4.5_0007963g0030 Nicotiana tabacum HOM05D006957 ORTHO05D008647 8.9e-15 85.1 192 30.7
Psat4g006040 Pisum sativum HOM05D006957 ORTHO05D008647 8.9e-15 85.1 152 31.6
TWI38G1647 Tripterygium wilfordii HOM05D006957 ORTHO05D008647 8.9e-15 85.1 152 32.9
Cfa000203 Carpinus fangiana HOM05D006957 ORTHO05D008647 1.2e-14 84.7 152 33.6
Dinv13912 Davidia involucrata HOM05D006957 ORTHO05D008647 1.2e-14 84.7 152 32.9
Glyma.17G012100 Glycine max HOM05D006957 ORTHO05D008647 1.2e-14 84.7 97 41.2
Phvul.003G080300 Phaseolus vulgaris HOM05D006957 ORTHO05D008647 1.2e-14 84.7 97 41.2
PGR042G2408 Punica granatum HOM05D006957 ORTHO05D008647 1.2e-14 84.7 193 31.6
Cc09_g01500 Coffea canephora HOM05D006957 ORTHO05D008647 1.5e-14 84.3 152 34.9
Prupe.6G022000 Prunus persica HOM05D006957 ORTHO05D008647 1.5e-14 84.3 152 32.9
Eucgr.E03906 Eucalyptus grandis HOM05D006957 ORTHO05D008647 2.0e-14 84.0 97 44.3
Glyma.07G262000 Glycine max HOM05D006957 ORTHO05D008647 2.0e-14 84.0 97 40.2
HanXRQChr16g0515501 Helianthus annuus HOM05D006957 ORTHO05D008647 2.0e-14 84.0 97 43.3
Lalb_Chr07g0177131 Lupinus albus HOM05D006957 ORTHO05D008647 2.0e-14 84.0 152 32.2
Thecc.06G223400 Theobroma cacao HOM05D006957 ORTHO05D008647 2.0e-14 84.0 152 32.9
MELO3C007402.2 Cucumis melo HOM05D006957 ORTHO05D008647 2.6e-14 83.6 195 32.3
CsaV3_6G048910 Cucumis sativus L. HOM05D006957 ORTHO05D008647 2.6e-14 83.6 195 32.3
Sed0022215 Sechium edule HOM05D006957 ORTHO05D008647 2.6e-14 83.6 195 31.3
VMungo1215G0309 Vigna mungo HOM05D006957 ORTHO05D008647 2.6e-14 83.6 97 41.2
ATR0794G153 Amborella trichopoda HOM05D006957 ORTHO05D008647 3.4e-14 83.2 146 33.6
Aqoxy4G01856 Aquilegia oxysepala HOM05D006957 ORTHO05D008647 3.4e-14 83.2 97 42.3
arahy.Tifrunner.gnm1.ann1.SK97UM Arachis hypogaea HOM05D006957 ORTHO05D008647 3.4e-14 83.2 97 40.2
arahy.Tifrunner.gnm1.ann1.VHEB9D Arachis hypogaea HOM05D006957 ORTHO05D008647 3.4e-14 83.2 97 40.2
MSTRG.7198 Avicennia marina HOM05D006957 ORTHO05D008647 3.4e-14 83.2 97 41.2
CDE05G2181 Ceratophyllum demersum HOM05D006957 ORTHO05D008647 3.4e-14 83.2 150 34.0
TPR.G29296 Trifolium pratense HOM05D006957 ORTHO05D008647 3.4e-14 83.2 152 32.2
Zm00001eb056950 Zea mays HOM05D006957 ORTHO05D008647 3.4e-14 83.2 151 33.8
A03p67500 Brassica napus HOM05D006957 ORTHO05D008647 4.4e-14 82.8 148 33.1
BraA01t02718Z Brassica rapa HOM05D006957 ORTHO05D008647 4.4e-14 82.8 148 33.1
CSS0002589 Camellia sinensis var. sinensis HOM05D006957 ORTHO05D008647 4.4e-14 82.8 152 32.2
Gohir.A06G149100 Gossypium hirsutum HOM05D006957 ORTHO05D008647 4.4e-14 82.8 97 42.3
Lj4g0000977 Lotus japonicus HOM05D006957 ORTHO05D008647 4.4e-14 82.8 152 31.6
CiPaw.10G072800 Carya illinoinensis HOM05D006957 ORTHO05D008647 5.8e-14 82.4 97 42.3
Oeu051204.1 Olea europaea HOM05D006957 ORTHO05D008647 5.8e-14 82.4 97 43.3
QL02p099916 Quercus lobata HOM05D006957 ORTHO05D008647 7.5e-14 82.0 152 32.9
CANSAT56G0113 Cannabis sativa HOM05D006957 ORTHO05D008647 9.8e-14 81.6 100 41.0
MD11G1027900 Malus domestica HOM05D006957 ORTHO05D008647 9.8e-14 81.6 152 31.6
Peaxi162Scf00178g01715 Petunia axillaris HOM05D006957 ORTHO05D008647 9.8e-14 81.6 186 30.6
RcHm_v2.0_Chr5g0077361 Rosa chinensis HOM05D006957 ORTHO05D008647 9.8e-14 81.6 97 41.2
GSVIVG01012704001 Vitis vinifera HOM05D006957 ORTHO05D008647 9.8e-14 81.6 152 31.6
FvH4_3g43300 Fragaria vesca HOM05D006957 ORTHO05D008647 1.3e-13 81.3 97 41.2
FAN11G3374 Fragaria x ananassa HOM05D006957 ORTHO05D008647 1.3e-13 81.3 97 41.2
FAN16G3059 Fragaria x ananassa HOM05D006957 ORTHO05D008647 1.3e-13 81.3 97 41.2
FAN21G2957 Fragaria x ananassa HOM05D006957 ORTHO05D008647 1.3e-13 81.3 97 41.2
FAN25G2833 Fragaria x ananassa HOM05D006957 ORTHO05D008647 1.3e-13 81.3 97 41.2
Gorai.010G181400 Gossypium raimondii HOM05D006957 ORTHO05D008647 1.3e-13 81.3 91 42.9
Lj1A1232T100 Lonicera japonica HOM05D006957 ORTHO05D008647 1.3e-13 81.3 152 32.2
Sabra04G0005100 Salix brachista HOM05D006957 ORTHO05D008647 1.3e-13 81.3 146 32.2
PGSC0003DMG400016446 Solanum tuberosum HOM05D006957 ORTHO05D008647 1.3e-13 81.3 186 30.1
EL10Ac8g20084 Beta vulgaris HOM05D006957 ORTHO05D008647 1.7e-13 80.9 193 30.6
Nitab4.5_0002695g0060 Nicotiana tabacum HOM05D006957 ORTHO05D008647 1.7e-13 80.9 244 27.9
PSO832G3220 Papaver somniferum HOM05D006957 ORTHO05D008647 1.7e-13 80.9 97 41.2
vmacro15796 Vaccinium macrocarpon HOM05D006957 ORTHO05D008647 1.7e-13 80.9 152 31.6
Ciclev10016210m.g Citrus clementina HOM05D006957 ORTHO05D008647 2.2e-13 80.5 193 30.1
ECA234G3681 Erigeron canadensis HOM05D006957 ORTHO05D008647 2.2e-13 80.5 152 32.2
TAR629G0592 Trochodendron aralioides HOM05D006957 ORTHO05D008647 2.2e-13 80.5 149 32.2
Ca_21073_v3 Cicer arietinum L. HOM05D006957 ORTHO05D008647 3.7e-13 79.7 91 41.8
Lsat_1_v5_gn_4_59280 Lactuca sativa HOM05D006957 ORTHO05D008647 3.7e-13 79.7 152 32.2
Hund21421 Selenicereus undatus HOM05D006957 ORTHO05D008647 3.7e-13 79.7 159 32.7
DCAR_028192 Daucus carota HOM05D006957 ORTHO05D008647 1.1e-12 78.2 146 32.2
MBI18_g04903_MAGBIO Magnolia biondii HOM05D006957 ORTHO05D008647 2.4e-12 77.0 152 32.2
Rhsim02G0105900 Rhododendron simsii HOM05D006957 ORTHO05D008647 5.4e-12 75.9 147 30.6
Nn1g07184 Nelumbo nucifera HOM05D006957 ORTHO05D008647 1.2e-11 74.7 78 46.2
Haze_06820 Corylus avellana HOM05D006957 ORTHO05D008647 2.0e-11 73.9 109 36.7
Duzib160G0853 Durio zibethinus HOM05D006957 ORTHO05D008647 2.7e-11 73.6 155 30.3
Ah.09g234750 Amaranthus hybridus HOM05D006957 ORTHO05D008647 3.9e-10 69.7 191 26.7
Duzib192G0359 Durio zibethinus HOM05D006957 ORTHO05D008647 3.9e-10 69.7 155 27.7


User provided reference genes

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