Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cre02.g118801 Chlamydomonas reinhardtii HOM05D007060 ORTHO05D009087 0.0e+00 1505.7 775 100.0
A01p41570 Brassica napus HOM05D007060 ORTHO05D009087 3.6e-85 320.5 435 40.7
Duzib106G1772 Durio zibethinus HOM05D007060 ORTHO05D009087 3.6e-85 320.5 441 40.8
THA.LOC104816472 Tarenaya hassleriana HOM05D007060 ORTHO05D009087 4.7e-85 320.1 444 40.5
SMO203G0203 Selaginella moellendorffii HOM05D007060 ORTHO05D009087 6.2e-85 319.7 429 42.7
Gorai.N007800 Gossypium raimondii HOM05D007060 ORTHO05D009087 1.1e-84 318.9 455 41.5
BraA01t04232Z Brassica rapa HOM05D007060 ORTHO05D009087 5.2e-84 316.6 448 40.0
CANSAT56G2168 Cannabis sativa HOM05D007060 ORTHO05D009087 1.2e-83 315.5 442 40.3
Thhalv10020598m.g Eutrema salsugineum HOM05D007060 ORTHO05D009087 1.5e-83 315.1 433 40.4
Sp3g08940 Schrenkiella parvula HOM05D007060 ORTHO05D009087 3.4e-83 313.9 433 40.4
AagrBONN_evm.TU.Sc2ySwM_344.3615 Anthoceros agrestis HOM05D007060 ORTHO05D009087 5.8e-83 313.2 435 40.2
Carub.0003s0986 Capsella rubella HOM05D007060 ORTHO05D009087 5.8e-83 313.2 435 39.5
RcHm_v2.0_Chr1g0331951 Rosa chinensis HOM05D007060 ORTHO05D009087 9.9e-83 312.4 443 39.7
AL3G22100 Arabidopsis lyrata HOM05D007060 ORTHO05D009087 1.3e-82 312.0 433 39.7
BolC1t05373H Brassica oleracea HOM05D007060 ORTHO05D009087 1.7e-82 311.6 448 40.0
AT3G10630 Arabidopsis thaliana HOM05D007060 ORTHO05D009087 3.7e-82 310.5 433 40.4
Migut.F00850 Erythranthe guttata HOM05D007060 ORTHO05D009087 3.7e-82 310.5 447 40.0
Oeu033276.1 Olea europaea HOM05D007060 ORTHO05D009087 4.9e-82 310.1 445 39.6
TWI63G0697 Tripterygium wilfordii HOM05D007060 ORTHO05D009087 4.9e-82 310.1 461 39.0
CARHR085210 Cardamine hirsuta HOM05D007060 ORTHO05D009087 6.4e-82 309.7 434 40.1
Glyma.10G195800 Glycine max HOM05D007060 ORTHO05D009087 8.4e-82 309.3 463 38.9
MD03G1165900 Malus domestica HOM05D007060 ORTHO05D009087 8.4e-82 309.3 441 42.0
Thecc.10G116400 Theobroma cacao HOM05D007060 ORTHO05D009087 1.1e-81 308.9 450 38.9
CSS0028923 Camellia sinensis var. sinensis HOM05D007060 ORTHO05D009087 1.9e-81 308.1 443 40.4
CSS0037157 Camellia sinensis var. sinensis HOM05D007060 ORTHO05D009087 2.4e-81 307.8 443 39.5
CSS0005765 Camellia sinensis var. sinensis HOM05D007060 ORTHO05D009087 3.2e-81 307.4 434 40.1
CSS0002387 Camellia sinensis var. sinensis HOM05D007060 ORTHO05D009087 7.1e-81 306.2 443 39.3
CSS0035234 Camellia sinensis var. sinensis HOM05D007060 ORTHO05D009087 7.1e-81 306.2 443 39.3
CSS0037937 Camellia sinensis var. sinensis HOM05D007060 ORTHO05D009087 7.1e-81 306.2 432 39.8
CSS0040194 Camellia sinensis var. sinensis HOM05D007060 ORTHO05D009087 7.1e-81 306.2 443 39.3
Hma1.2p1_0457F.1_g156870 Hydrangea macrophylla HOM05D007060 ORTHO05D009087 7.1e-81 306.2 430 40.5
PGR142G1122 Punica granatum HOM05D007060 ORTHO05D009087 7.1e-81 306.2 463 40.8
CSS0014623 Camellia sinensis var. sinensis HOM05D007060 ORTHO05D009087 9.2e-81 305.8 443 39.3
CSS0046160 Camellia sinensis var. sinensis HOM05D007060 ORTHO05D009087 9.2e-81 305.8 443 39.3
GSVIVG01034635001 Vitis vinifera HOM05D007060 ORTHO05D009087 9.2e-81 305.8 429 40.6
CiPaw.13G043400 Carya illinoinensis HOM05D007060 ORTHO05D009087 1.6e-80 305.1 434 40.3
CSS0019796 Camellia sinensis var. sinensis HOM05D007060 ORTHO05D009087 2.1e-80 304.7 443 39.1
Lj5g0018387 Lotus japonicus HOM05D007060 ORTHO05D009087 3.5e-80 303.9 440 40.7
CSS0031015 Camellia sinensis var. sinensis HOM05D007060 ORTHO05D009087 4.6e-80 303.5 433 40.9
Os09g0296700 Oryza sativa ssp. japonica HOM05D007060 ORTHO05D009087 4.6e-80 303.5 437 40.7
CsaV3_5G035220 Cucumis sativus L. HOM05D007060 ORTHO05D009087 6.0e-80 303.1 434 40.8
Prupe.4G266300 Prunus persica HOM05D007060 ORTHO05D009087 1.0e-79 302.4 442 39.6
TAR623G0941 Trochodendron aralioides HOM05D007060 ORTHO05D009087 1.3e-79 302.0 435 38.9
ClCG05G021920 Citrullus lanatus HOM05D007060 ORTHO05D009087 1.7e-79 301.6 441 40.8
Atru.chr12.1066 Acer truncatum HOM05D007060 ORTHO05D009087 2.3e-79 301.2 429 40.6
Lj3P923T49 Lonicera japonica HOM05D007060 ORTHO05D009087 5.1e-79 300.1 430 39.1
CSS0035496 Camellia sinensis var. sinensis HOM05D007060 ORTHO05D009087 6.6e-79 299.7 442 39.4
Cfa010526 Carpinus fangiana HOM05D007060 ORTHO05D009087 6.6e-79 299.7 430 39.5
Sed0007060 Sechium edule HOM05D007060 ORTHO05D009087 6.6e-79 299.7 432 39.1
VMungo0720G1293 Vigna mungo HOM05D007060 ORTHO05D009087 6.6e-79 299.7 444 40.1
SalBow1G5690 Salvia bowleyana HOM05D007060 ORTHO05D009087 8.6e-79 299.3 434 41.2
QL04p047886 Quercus lobata HOM05D007060 ORTHO05D009087 1.1e-78 298.9 436 40.1
Ciclev10015484m.g Citrus clementina HOM05D007060 ORTHO05D009087 1.5e-78 298.5 435 41.1
Potri.008G018200 Populus trichocarpa HOM05D007060 ORTHO05D009087 1.9e-78 298.1 425 39.3
CSS0040116 Camellia sinensis var. sinensis HOM05D007060 ORTHO05D009087 2.5e-78 297.7 442 39.1
Cc02_g09400 Coffea canephora HOM05D007060 ORTHO05D009087 4.3e-78 297.0 460 38.3
Psat6g172000 Pisum sativum HOM05D007060 ORTHO05D009087 5.6e-78 296.6 432 38.7
MELO3C012336.2 Cucumis melo HOM05D007060 ORTHO05D009087 7.3e-78 296.2 450 40.0
Nitab4.5_0001781g0140 Nicotiana tabacum HOM05D007060 ORTHO05D009087 7.3e-78 296.2 435 39.5
TPR.G37861 Trifolium pratense HOM05D007060 ORTHO05D009087 7.3e-78 296.2 444 38.3
unitig_46.g18644 Utricularia gibba HOM05D007060 ORTHO05D009087 7.3e-78 296.2 435 41.1
HanXRQChr02g0053541 Helianthus annuus HOM05D007060 ORTHO05D009087 9.6e-78 295.8 455 38.0
Lsat_1_v5_gn_2_105821 Lactuca sativa HOM05D007060 ORTHO05D009087 9.6e-78 295.8 423 40.4
COL.COLO4_07825 Corchorus olitorius HOM05D007060 ORTHO05D009087 1.6e-77 295.0 433 39.3
Manes.07G085000 Manihot esculenta HOM05D007060 ORTHO05D009087 1.6e-77 295.0 440 39.5
SEGI_33772 Sequoiadendron giganteum HOM05D007060 ORTHO05D009087 1.6e-77 295.0 453 38.4
ECA238G3502 Erigeron canadensis HOM05D007060 ORTHO05D009087 2.1e-77 294.7 432 38.7
Solyc11g006560.3 Solanum lycopersicum HOM05D007060 ORTHO05D009087 3.6e-77 293.9 454 39.9
CAN.G143.24 Capsicum annuum HOM05D007060 ORTHO05D009087 4.7e-77 293.5 432 40.0
Nn6g34700 Nelumbo nucifera HOM05D007060 ORTHO05D009087 4.7e-77 293.5 477 37.7
Medtr1g090540 Medicago truncatula HOM05D007060 ORTHO05D009087 8.1e-77 292.7 430 38.8
Phvul.007G138500 Phaseolus vulgaris HOM05D007060 ORTHO05D009087 8.1e-77 292.7 429 39.2
Sopen11g002500 Solanum pennellii HOM05D007060 ORTHO05D009087 1.1e-76 292.4 437 40.3
Gohir.D06G177400 Gossypium hirsutum HOM05D007060 ORTHO05D009087 1.4e-76 292.0 349 44.1
MSTRG.9036 Avicennia marina HOM05D007060 ORTHO05D009087 1.8e-76 291.6 438 39.3
Nitab4.5_0007799g0060 Nicotiana tabacum HOM05D007060 ORTHO05D009087 8.9e-76 289.3 427 38.4
Zm00001eb309100 Zea mays HOM05D007060 ORTHO05D009087 1.5e-75 288.5 460 38.9
Sabra08G0011800 Salix brachista HOM05D007060 ORTHO05D009087 2.6e-75 287.7 422 38.6
Aqoxy1G00669 Aquilegia oxysepala HOM05D007060 ORTHO05D009087 1.3e-74 285.4 435 37.7
Eucgr.G02680 Eucalyptus grandis HOM05D007060 ORTHO05D009087 1.3e-74 285.4 348 44.0
Ca_10429_v3 Cicer arietinum L. HOM05D007060 ORTHO05D009087 1.7e-74 285.0 423 37.8
Peaxi162Scf00725g00056 Petunia axillaris HOM05D007060 ORTHO05D010136 1.7e-74 285.0 427 39.1
MCO11G427 Micromonas commoda HOM05D007060 ORTHO05D009087 2.2e-74 284.6 463 40.6
PGSC0003DMG400001998 Solanum tuberosum HOM05D007060 ORTHO05D009087 2.2e-74 284.6 454 38.8
Cpa.g.sc54.25 Carica papaya HOM05D007060 ORTHO05D009087 2.9e-74 284.3 438 39.0
DCAR_005120 Daucus carota HOM05D007060 ORTHO05D009087 1.9e-73 281.6 348 43.4
PGR142G0278 Punica granatum HOM05D007060 ORTHO05D009087 9.3e-73 279.3 464 39.2
CDE06G1445 Ceratophyllum demersum HOM05D007060 ORTHO05D009087 3.5e-72 277.3 440 37.0
Sopen11g002460 Solanum pennellii HOM05D007060 ORTHO05D009087 7.8e-72 276.2 351 43.3
Actinidia03837 Actinidia chinensis HOM05D007060 ORTHO05D009087 2.3e-71 274.6 348 41.4
Rhsim03G0096200 Rhododendron simsii HOM05D007060 ORTHO05D009087 3.9e-71 273.9 348 42.8
Dinv08415 Davidia involucrata HOM05D007060 ORTHO05D009087 2.8e-69 267.7 392 38.5
ATR0772G206 Amborella trichopoda HOM05D007060 ORTHO05D009087 4.8e-69 266.9 459 37.3
BcaB04g21186 Brassica carinata HOM05D007060 ORTHO05D009087 8.1e-69 266.2 453 37.1
Sopen11g002480 Solanum pennellii HOM05D007060 ORTHO05D009087 1.8e-68 265.0 345 42.0
CBR_g29369 Chara braunii HOM05D007060 ORTHO05D009087 9.9e-67 259.2 308 43.2
PRCOL_00001658 Prasinoderma coloniale HOM05D007060 ORTHO05D009087 6.4e-66 256.5 483 35.4
Lalb_Chr21g0312821 Lupinus albus HOM05D007060 ORTHO05D009087 1.9e-65 255.0 308 42.5
Pp3c6_17860 Physcomitrium patens HOM05D007060 ORTHO05D009087 5.3e-60 236.9 444 33.8
Hma1.2p1_0826F.1_g224930 Hydrangea macrophylla HOM05D007060 ORTHO05D009087 1.7e-50 205.3 217 49.3
SHI22512 Sapria himalayana HOM05D007060 ORTHO05D009087 1.7e-50 205.3 393 33.8
Cre09.g386732 Chlamydomonas reinhardtii HOM05D007060 ORTHO05D009087 5.9e-43 180.3 336 32.1
Glyma.20G194300 Glycine max HOM05D007060 ORTHO05D009087 7.6e-43 179.9 329 34.0
PRCOL_00006151 Prasinoderma coloniale HOM05D007060 ORTHO05D048979 1.3e-29 136.0 320 31.6
FAN24G3568 Fragaria x ananassa HOM05D007060 ORTHO05D009087 9.1e-28 129.8 130 47.7
FvH4_5g28400 Fragaria vesca HOM05D007060 ORTHO05D009087 1.3e-21 109.4 157 38.2
TAR625G0310 Trochodendron aralioides HOM05D007060 ORTHO05D009087 5.3e-20 104.0 119 42.0
MCO05G161 Micromonas commoda HOM05D007060 ORTHO05D048979 1.3e-18 99.4 350 27.4
FAN03G2415 Fragaria x ananassa HOM05D007060 ORTHO05D009087 2.0e-11 75.5 96 41.7
HPP92_006362 Vanilla planifolia HOM05D007060 ORTHO05D009087 3.2e-09 68.2 134 35.1


User provided reference genes

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