Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cre02.g112200 Chlamydomonas reinhardtii HOM05D015581 ORTHO05D044314 0.0e+00 4845.0 2987 100.0
Cre10.g434600 Chlamydomonas reinhardtii HOM05D015581 ORTHO05D044314 2.7e-72 279.6 1703 23.7
Cre16.g655950 Chlamydomonas reinhardtii HOM05D045309 ORTHO05D143423 2.3e-18 100.5 340 28.2
Cre07.g334300 Chlamydomonas reinhardtii HOM05D015581 ORTHO05D007844 5.6e-17 95.9 506 21.9
Cre07.g327750 Chlamydomonas reinhardtii HOM05D015581 ORTHO05D139453 1.2e-11 78.2 322 22.7
Cre06.g278226 Chlamydomonas reinhardtii HOM05D015581 ORTHO05D144417 3.0e-10 73.6 320 24.7
Cre01.g029400 Chlamydomonas reinhardtii HOM05D045600 ORTHO05D147260 8.6e-10 72.0 331 24.8
Os11g0660300 Oryza sativa ssp. japonica HOM05D005151 ORTHO05D006322 2.5e-09 70.5 136 25.0
TWI63G0393 Tripterygium wilfordii HOM05D005151 ORTHO05D006322 4.3e-09 69.7 121 26.4
ATR0693G369 Amborella trichopoda HOM05D005151 ORTHO05D006322 7.3e-09 68.9 121 28.1
Zm00001eb165440 Zea mays HOM05D005151 ORTHO05D006322 1.2e-08 68.2 121 26.4
SEGI_15722 Sequoiadendron giganteum HOM05D005151 ORTHO05D006322 2.1e-08 67.4 121 25.6
Nn6g35560 Nelumbo nucifera HOM05D005151 ORTHO05D006322 2.8e-08 67.0 121 27.3
Oeu054828.1 Olea europaea HOM05D005151 ORTHO05D006322 3.6e-08 66.6 123 26.0
CANSAT56G1855 Cannabis sativa HOM05D005151 ORTHO05D006322 1.8e-07 64.3 121 26.4
Cre05.g243452 Chlamydomonas reinhardtii HOM05D015581 ORTHO05D146827 1.8e-07 64.3 465 20.4
SGA_v2.0_scaffold23G10051 Striga asiatica HOM05D005151 ORTHO05D006322 1.8e-07 64.3 123 26.8
Dinv36800 Davidia involucrata HOM05D005151 ORTHO05D006322 2.4e-07 63.9 121 27.3
SEGI_06199 Sequoiadendron giganteum HOM05D005323 ORTHO05D006820 2.4e-07 63.9 200 22.0
Mapoly0049s0059 Marchantia polymorpha HOM05D005323 ORTHO05D006820 6.9e-07 62.4 139 26.6
Carub.0005s0880 Capsella rubella HOM05D005717 ORTHO05D007221 2.6e-06 60.5 120 30.0
Cre17.g723450 Chlamydomonas reinhardtii HOM05D010245 ORTHO05D017828 2.6e-06 60.5 207 27.5
CSS0018836 Camellia sinensis var. sinensis HOM05D005717 ORTHO05D007221 3.4e-06 60.1 120 29.2
Actinidia24269 Actinidia chinensis HOM05D005717 ORTHO05D007221 4.4e-06 59.7 120 28.3
Nitab4.5_0002805g0040 Nicotiana tabacum HOM05D005717 ORTHO05D007221 4.4e-06 59.7 120 26.7
Psat5g117120 Pisum sativum HOM05D000464 ORTHO05D006292 4.4e-06 59.7 149 26.8
Atru.chr12.2297 Acer truncatum HOM05D005151 ORTHO05D006322 5.8e-06 59.3 96 31.2
Rhsim12G0147200 Rhododendron simsii HOM05D005717 ORTHO05D007221 5.8e-06 59.3 120 29.2
Cre16.g658900 Chlamydomonas reinhardtii HOM05D045309 ORTHO05D141844 7.6e-06 58.9 356 22.5
Lsat_1_v5_gn_7_34720 Lactuca sativa HOM05D005151 ORTHO05D006322 7.6e-06 58.9 121 24.8
vmacro16471 Vaccinium macrocarpon HOM05D005717 ORTHO05D007221 7.6e-06 58.9 120 27.5
MSTRG.10530 Avicennia marina HOM05D005151 ORTHO05D006322 9.9e-06 58.5 123 25.2
Cre09.g398400 Chlamydomonas reinhardtii HOM05D015581 ORTHO05D140507 9.9e-06 58.5 419 22.9
SHI30700 Sapria himalayana HOM05D005151 ORTHO05D006322 9.9e-06 58.5 120 25.0


User provided reference genes

Program Settings