Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cre02.g110450 Chlamydomonas reinhardtii HOM05D006661 ORTHO05D008369 4.9e-125 451.1 215 100.0
DCAR_003069 Daucus carota HOM05D006661 ORTHO05D008369 8.9e-42 174.5 197 46.7
Rhsim11G0046400 Rhododendron simsii HOM05D006661 ORTHO05D008369 7.5e-41 171.4 193 45.1
vmacro00160 Vaccinium macrocarpon HOM05D006661 ORTHO05D008369 1.3e-40 170.6 193 45.1
TAR383G0029 Trochodendron aralioides HOM05D006661 ORTHO05D008369 2.9e-40 169.5 207 42.5
Cc08_g10380 Coffea canephora HOM05D006661 ORTHO05D008369 8.3e-40 167.9 203 42.9
MSTRG.11669 Avicennia marina HOM05D006661 ORTHO05D008369 1.1e-39 167.5 206 41.7
unitig_748.g7518 Utricularia gibba HOM05D006661 ORTHO05D008369 1.4e-39 167.2 203 41.4
HPP92_005507 Vanilla planifolia HOM05D006661 ORTHO05D008369 1.4e-39 167.2 205 41.0
ATR0789G168 Amborella trichopoda HOM05D006661 ORTHO05D008369 2.4e-39 166.4 193 44.6
CiPaw.16G029900 Carya illinoinensis HOM05D006661 ORTHO05D008369 3.2e-39 166.0 207 42.5
CSS0024744 Camellia sinensis var. sinensis HOM05D006661 ORTHO05D008369 4.1e-39 165.6 207 42.5
Ca_00502_v3 Cicer arietinum L. HOM05D006661 ORTHO05D008369 4.1e-39 165.6 193 42.5
ClCG08G016930 Citrullus lanatus HOM05D006661 ORTHO05D008369 5.4e-39 165.2 207 42.0
Haze_18212 Corylus avellana HOM05D006661 ORTHO05D008369 5.4e-39 165.2 193 44.0
CsaV3_2G025680 Cucumis sativus L. HOM05D006661 ORTHO05D008369 7.1e-39 164.9 193 43.0
Medtr2g018310 Medicago truncatula HOM05D006661 ORTHO05D008369 7.1e-39 164.9 193 42.5
Sabra06G0181100 Salix brachista HOM05D006661 ORTHO05D008369 7.1e-39 164.9 193 43.5
Zm00001eb162230 Zea mays HOM05D006661 ORTHO05D008369 7.1e-39 164.9 203 43.3
Nn6g35396 Nelumbo nucifera HOM05D006661 ORTHO05D008369 9.2e-39 164.5 207 41.5
QL02p001540 Quercus lobata HOM05D006661 ORTHO05D008369 9.2e-39 164.5 193 43.0
TPR.G20633 Trifolium pratense HOM05D006661 ORTHO05D008369 9.2e-39 164.5 203 41.4
Cfa017936 Carpinus fangiana HOM05D006661 ORTHO05D008369 1.2e-38 164.1 207 42.5
Duzib187G1697 Durio zibethinus HOM05D006661 ORTHO05D008369 1.2e-38 164.1 203 40.9
Manes.16G078200 Manihot esculenta HOM05D006661 ORTHO05D008369 1.2e-38 164.1 193 44.0
SGA_v2.0_scaffold88G27220 Striga asiatica HOM05D006661 ORTHO05D008369 1.2e-38 164.1 203 42.4
CBR_g22258 Chara braunii HOM05D006661 ORTHO05D008369 1.6e-38 163.7 195 44.6
Duzib168G0126 Durio zibethinus HOM05D000575 ORTHO05D008369 1.6e-38 163.7 196 41.3
SalBow4G0568 Salvia bowleyana HOM05D006661 ORTHO05D008369 1.6e-38 163.7 203 41.9
CANSAT25G2346 Cannabis sativa HOM05D006661 ORTHO05D008369 2.1e-38 163.3 193 42.5
Os01g0559000 Oryza sativa ssp. japonica HOM05D006661 ORTHO05D008369 2.1e-38 163.3 203 41.9
Thecc.09G051500 Theobroma cacao HOM05D006661 ORTHO05D008369 2.1e-38 163.3 203 40.9
Pp3c22_18330 Physcomitrium patens HOM05D006661 ORTHO05D008369 2.7e-38 162.9 193 44.0
Potri.018G056100 Populus trichocarpa HOM05D006661 ORTHO05D008369 3.5e-38 162.5 193 43.0
Actinidia01201 Actinidia chinensis HOM05D006661 ORTHO05D008369 4.6e-38 162.2 193 42.0
Gohir.D06G089000 Gossypium hirsutum HOM05D006661 ORTHO05D008369 4.6e-38 162.2 203 40.4
Sp4g05860 Schrenkiella parvula HOM05D006661 ORTHO05D008369 4.6e-38 162.2 203 40.4
Gorai.010G102800 Gossypium raimondii HOM05D006661 ORTHO05D008369 6.0e-38 161.8 193 41.5
Lj4g0006609 Lotus japonicus HOM05D006661 ORTHO05D008369 6.0e-38 161.8 193 41.5
Gohir.A06G090000 Gossypium hirsutum HOM05D006661 ORTHO05D008369 7.8e-38 161.4 203 40.4
Migut.A00149 Erythranthe guttata HOM05D006661 ORTHO05D008369 1.0e-37 161.0 203 40.4
Psat1g192360 Pisum sativum HOM05D006661 ORTHO05D008369 1.0e-37 161.0 193 42.5
Thhalv10002098m.g Eutrema salsugineum HOM05D006661 ORTHO05D008369 1.3e-37 160.6 203 40.4
CARHR287330 Cardamine hirsuta HOM05D006661 ORTHO05D008369 1.7e-37 160.2 203 40.4
Nitab4.5_0000359g0060 Nicotiana tabacum HOM05D006661 ORTHO05D008369 1.7e-37 160.2 193 40.9
Peaxi162Scf00436g00823 Petunia axillaris HOM05D006661 ORTHO05D008369 1.7e-37 160.2 193 40.9
arahy.Tifrunner.gnm1.ann1.R5Q5WD Arachis hypogaea HOM05D006661 ORTHO05D008369 2.3e-37 159.8 203 40.4
Eucgr.H03073 Eucalyptus grandis HOM05D006661 ORTHO05D008369 2.3e-37 159.8 207 40.6
Lsat_1_v5_gn_6_13140 Lactuca sativa HOM05D006661 ORTHO05D008369 2.3e-37 159.8 203 40.4
Hund03354 Selenicereus undatus HOM05D006661 ORTHO05D008369 2.3e-37 159.8 203 40.9
GSVIVG01035347001 Vitis vinifera HOM05D006661 ORTHO05D008369 2.3e-37 159.8 193 42.5
CAN.G6.20 Capsicum annuum HOM05D006661 ORTHO05D008369 3.0e-37 159.5 203 39.4
ECA233G6145 Erigeron canadensis HOM05D006661 ORTHO05D008369 3.0e-37 159.5 203 41.4
AL4G18030 Arabidopsis lyrata HOM05D006661 ORTHO05D008369 3.9e-37 159.1 203 39.9
CDE07G0448 Ceratophyllum demersum HOM05D006661 ORTHO05D008369 3.9e-37 159.1 205 41.5
Ciclev10009515m.g Citrus clementina HOM05D006661 ORTHO05D008369 3.9e-37 159.1 193 40.9
Atru.chr7.2017 Acer truncatum HOM05D006661 ORTHO05D008369 5.1e-37 158.7 193 41.5
arahy.Tifrunner.gnm1.ann1.KA607S Arachis hypogaea HOM05D006661 ORTHO05D008369 5.1e-37 158.7 193 41.5
Carub.0004s0581 Capsella rubella HOM05D006661 ORTHO05D008369 5.1e-37 158.7 203 40.4
Glyma.13G222200 Glycine max HOM05D006661 ORTHO05D008369 5.1e-37 158.7 193 40.9
AT2G25950 Arabidopsis thaliana HOM05D006661 ORTHO05D008369 6.6e-37 158.3 193 40.9
HanXRQChr09g0251201 Helianthus annuus HOM05D006661 ORTHO05D008369 6.6e-37 158.3 203 41.4
Prupe.1G414600 Prunus persica HOM05D006661 ORTHO05D008369 6.6e-37 158.3 193 41.5
BcaB06g29613 Brassica carinata HOM05D006661 ORTHO05D008369 8.6e-37 157.9 203 39.9
BcaC02g08315 Brassica carinata HOM05D006661 ORTHO05D008369 8.6e-37 157.9 203 39.9
BolC4t27119H Brassica oleracea HOM05D006661 ORTHO05D008369 8.6e-37 157.9 203 39.9
Aqoxy7G01325 Aquilegia oxysepala HOM05D006661 ORTHO05D008369 1.1e-36 157.5 203 40.4
A04p20170 Brassica napus HOM05D006661 ORTHO05D008369 1.1e-36 157.5 193 40.9
C04p55870 Brassica napus HOM05D006661 ORTHO05D008369 1.1e-36 157.5 203 39.9
BraA04t17597Z Brassica rapa HOM05D006661 ORTHO05D008369 1.1e-36 157.5 193 40.9
Phvul.006G168200 Phaseolus vulgaris HOM05D006661 ORTHO05D008369 1.1e-36 157.5 193 40.4
TWI34G0500 Tripterygium wilfordii HOM05D006661 ORTHO05D008369 1.1e-36 157.5 193 42.0
FAN15G2916 Fragaria x ananassa HOM05D006661 ORTHO05D008369 1.5e-36 157.1 193 42.0
FAN20G2753 Fragaria x ananassa HOM05D006661 ORTHO05D008369 1.5e-36 157.1 193 42.0
Lalb_Chr18g0055101 Lupinus albus HOM05D006661 ORTHO05D008369 1.5e-36 157.1 193 41.5
RcHm_v2.0_Chr6g0310531 Rosa chinensis HOM05D006661 ORTHO05D008369 1.5e-36 157.1 193 42.0
Aa31LG5G9740 Aethionema arabicum HOM05D006661 ORTHO05D008369 1.9e-36 156.8 203 39.9
THA.LOC104803733 Tarenaya hassleriana HOM05D006661 ORTHO05D008369 1.9e-36 156.8 205 41.0
VMungo0540G1431 Vigna mungo HOM05D006661 ORTHO05D008369 1.9e-36 156.8 193 40.9
PSO832G3146 Papaver somniferum HOM05D006661 ORTHO05D008369 4.3e-36 155.6 193 40.9
Sed0008959 Sechium edule HOM05D006661 ORTHO05D008369 4.3e-36 155.6 193 41.5
AUR62022048 Chenopodium quinoa HOM05D006661 ORTHO05D008369 7.3e-36 154.8 203 39.4
Nitab4.5_0001179g0020 Nicotiana tabacum HOM05D006661 ORTHO05D008369 7.3e-36 154.8 207 40.1
PGR031G2394 Punica granatum HOM05D006661 ORTHO05D008369 7.3e-36 154.8 193 40.9
FvH4_2g32150 Fragaria vesca HOM05D006661 ORTHO05D008369 9.5e-36 154.5 193 40.9
FAN24G0958 Fragaria x ananassa HOM05D006661 ORTHO05D008369 9.5e-36 154.5 193 40.9
AagrBONN_evm.TU.Sc2ySwM_362.2052 Anthoceros agrestis HOM05D006661 ORTHO05D008369 1.6e-35 153.7 201 40.8
Solyc08g065640.3 Solanum lycopersicum HOM05D006661 ORTHO05D008369 2.1e-35 153.3 203 37.4
Sopen08g019360 Solanum pennellii HOM05D006661 ORTHO05D008369 2.1e-35 153.3 203 37.4
MD08G1044700 Malus domestica HOM05D006661 ORTHO05D008369 2.8e-35 152.9 193 40.4
Cpa.g.sc7.195 Carica papaya HOM05D006661 ORTHO05D008369 3.6e-35 152.5 193 40.9
PGSC0003DMG400002199 Solanum tuberosum HOM05D006661 ORTHO05D008369 4.7e-35 152.1 203 36.9
SMO169G0297 Selaginella moellendorffii HOM05D006661 ORTHO05D008369 7.6e-33 144.8 191 42.4
Hma1.2p1_0450F.1_g155690 Hydrangea macrophylla HOM05D006661 ORTHO05D008369 1.2e-30 137.5 170 42.4
Hma1.2p1_2451F.1_g322380 Hydrangea macrophylla HOM05D006661 ORTHO05D008369 2.5e-28 129.8 207 36.2
MELO3C030341.2 Cucumis melo HOM05D006661 ORTHO05D008369 1.6e-27 127.1 269 32.7
Lj8A552G6 Lonicera japonica HOM05D006661 ORTHO05D008369 1.6e-27 127.1 167 40.1
Sabra06G0180500 Salix brachista HOM05D006661 ORTHO05D008369 8.1e-27 124.8 137 43.8
Sc23g0005520 Simmondsia chinensis HOM05D006661 ORTHO05D008369 8.1e-27 124.8 137 43.1
AUR62009178 Chenopodium quinoa HOM05D006661 ORTHO05D008369 1.5e-25 120.6 177 36.7
EL10Ac2g03924 Beta vulgaris HOM05D006661 ORTHO05D008369 1.3e-24 117.5 211 33.2
FAN27G1843 Fragaria x ananassa HOM05D006661 ORTHO05D008369 3.9e-21 105.9 176 35.2
SEGI_00170 Sequoiadendron giganteum HOM05D006661 ORTHO05D008369 2.8e-19 99.8 135 40.7
PRCOL_00000611 Prasinoderma coloniale HOM05D006661 ORTHO05D008369 4.8e-19 99.0 202 33.7
Aqoxy6G02410 Aquilegia oxysepala HOM05D006661 ORTHO05D008369 1.4e-18 97.4 214 30.8
CANSAT78G0664 Cannabis sativa HOM05D006661 ORTHO05D008369 2.4e-18 96.7 139 40.3
PSO063G2325 Papaver somniferum HOM05D006661 ORTHO05D008369 2.4e-18 96.7 121 42.1
Sabra06G0180400 Salix brachista HOM05D006661 ORTHO05D008369 3.1e-18 96.3 99 45.5
MCO14G523 Micromonas commoda HOM05D006661 ORTHO05D008369 1.7e-16 90.5 134 37.3
Cfa026513 Carpinus fangiana HOM05D006661 ORTHO05D008369 2.9e-16 89.7 225 31.1
Mapoly0027s0002 Marchantia polymorpha HOM05D006661 ORTHO05D008369 1.1e-15 87.8 188 30.9
MD08G1045300 Malus domestica HOM05D006661 ORTHO05D008369 1.4e-15 87.4 99 42.4
Oeu036347.1 Olea europaea HOM05D006661 ORTHO05D008369 8.7e-13 78.2 107 39.3
CANSAT25G1095 Cannabis sativa HOM05D006661 ORTHO05D008369 1.6e-11 73.9 97 39.2
Ah.06g192240 Amaranthus hybridus HOM05D005403 ORTHO05D006572 1.2e-06 57.8 160 26.2
CiPaw.08G124800 Carya illinoinensis HOM05D005403 ORTHO05D006572 2.7e-06 56.6 149 28.2
COL.COLO4_15309 Corchorus olitorius HOM05D005403 ORTHO05D006572 2.7e-06 56.6 147 28.6
QL02p001525 Quercus lobata HOM05D006661 ORTHO05D008369 7.9e-06 55.1 77 39.0


User provided reference genes

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