Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cre02.g109800 Chlamydomonas reinhardtii HOM05D007151 ORTHO05D009056 0.0e+00 1207.2 664 100.0
MCO12G285 Micromonas commoda HOM05D007151 ORTHO05D009056 6.1e-49 199.9 598 34.3
PRCOL_00000450 Prasinoderma coloniale HOM05D007151 ORTHO05D009056 2.7e-44 184.5 502 35.3
Pp3c21_4180 Physcomitrium patens HOM05D007151 ORTHO05D009056 4.5e-44 183.7 529 30.6
Prupe.7G252600 Prunus persica HOM05D007151 ORTHO05D009056 2.2e-43 181.4 528 30.3
SEGI_09059 Sequoiadendron giganteum HOM05D007151 ORTHO05D009056 6.5e-43 179.9 539 28.0
MD02G1011800 Malus domestica HOM05D007151 ORTHO05D009056 1.5e-42 178.7 523 31.0
Mapoly0072s0110 Marchantia polymorpha HOM05D007151 ORTHO05D009056 1.9e-42 178.3 540 28.3
Potri.018G112600 Populus trichocarpa HOM05D007151 ORTHO05D009056 1.2e-41 175.6 537 30.2
Sabra18G0095800 Salix brachista HOM05D007151 ORTHO05D009056 1.0e-40 172.6 509 30.5
RcHm_v2.0_Chr2g0086401 Rosa chinensis HOM05D007151 ORTHO05D009056 1.8e-40 171.8 526 29.8
FAN23G0937 Fragaria x ananassa HOM05D007151 ORTHO05D009056 1.2e-39 169.1 539 29.5
Ciclev10008285m.g Citrus clementina HOM05D007151 ORTHO05D009056 3.4e-39 167.5 524 29.6
Os06g0181400 Oryza sativa ssp. japonica HOM05D007151 ORTHO05D009056 3.4e-39 167.5 508 28.1
Atru.chr7.189 Acer truncatum HOM05D007151 ORTHO05D009056 4.4e-39 167.2 532 30.1
SGA_v2.0_scaffold336G49159 Striga asiatica HOM05D007151 ORTHO05D009056 5.7e-39 166.8 536 28.9
Zm00001eb268060 Zea mays HOM05D007151 ORTHO05D009056 9.8e-39 166.0 553 27.8
CANSAT11G1483 Cannabis sativa HOM05D007151 ORTHO05D009056 1.3e-38 165.6 529 28.7
Thecc.09G036700 Theobroma cacao HOM05D007151 ORTHO05D009056 1.3e-38 165.6 509 30.1
Lj9A711T48 Lonicera japonica HOM05D007151 ORTHO05D009056 1.7e-38 165.2 539 29.5
CARHR104080 Cardamine hirsuta HOM05D007151 ORTHO05D009056 2.2e-38 164.9 518 29.5
FvH4_1g01491 Fragaria vesca HOM05D007151 ORTHO05D009056 2.2e-38 164.9 526 29.7
FAN26G2518 Fragaria x ananassa HOM05D007151 ORTHO05D009056 2.2e-38 164.9 542 29.3
Gorai.013G218000 Gossypium raimondii HOM05D007151 ORTHO05D009056 2.2e-38 164.9 518 29.7
C07p49460 Brassica napus HOM05D007151 ORTHO05D009056 2.8e-38 164.5 526 28.7
Actinidia04263 Actinidia chinensis HOM05D007151 ORTHO05D009056 3.7e-38 164.1 513 29.2
BolC7t45451H Brassica oleracea HOM05D007151 ORTHO05D009056 8.3e-38 162.9 523 29.1
COL.COLO4_18747 Corchorus olitorius HOM05D007151 ORTHO05D009056 1.1e-37 162.5 548 29.9
BraA03t14189Z Brassica rapa HOM05D007151 ORTHO05D009056 1.4e-37 162.2 526 28.7
Oeu052172.1 Olea europaea HOM05D007151 ORTHO05D009056 1.8e-37 161.8 515 28.3
Sed0008117 Sechium edule HOM05D007151 ORTHO05D009056 1.8e-37 161.8 511 28.2
A03p51030 Brassica napus HOM05D007151 ORTHO05D009056 2.4e-37 161.4 531 28.2
Thhalv10025257m.g Eutrema salsugineum HOM05D007151 ORTHO05D009056 2.4e-37 161.4 532 28.0
Cpa.g.sc46.106 Carica papaya HOM05D007151 ORTHO05D009056 4.1e-37 160.6 511 30.5
Gohir.A13G185600 Gossypium hirsutum HOM05D007151 ORTHO05D009056 5.4e-37 160.2 513 29.0
Gohir.D13G192100 Gossypium hirsutum HOM05D007151 ORTHO05D009056 5.4e-37 160.2 518 29.3
Manes.06G039800 Manihot esculenta HOM05D007151 ORTHO05D009056 5.4e-37 160.2 536 28.5
Actinidia04269 Actinidia chinensis HOM05D007151 ORTHO05D009056 1.6e-36 158.7 513 28.8
PGR142G3459 Punica granatum HOM05D007151 ORTHO05D009056 1.6e-36 158.7 510 29.2
CAN.G520.35 Capsicum annuum HOM05D007151 ORTHO05D009056 2.7e-36 157.9 515 30.7
Cfa020867 Carpinus fangiana HOM05D007151 ORTHO05D009056 2.7e-36 157.9 509 29.3
Duzib168G1221 Durio zibethinus HOM05D007151 ORTHO05D009056 2.7e-36 157.9 512 30.5
Lj6g0019652 Lotus japonicus HOM05D007151 ORTHO05D009056 4.5e-36 157.1 513 27.7
Aqoxy7G03505 Aquilegia oxysepala HOM05D007151 ORTHO05D009056 1.0e-35 156.0 516 26.4
CiPaw.15G171100 Carya illinoinensis HOM05D007151 ORTHO05D009056 1.0e-35 156.0 529 30.2
CsaV3_1G028600 Cucumis sativus L. HOM05D007151 ORTHO05D009056 1.0e-35 156.0 531 27.9
AT2G22650 Arabidopsis thaliana HOM05D007151 ORTHO05D009056 2.3e-35 154.8 521 28.4
Migut.K00359 Erythranthe guttata HOM05D007151 ORTHO05D009056 2.9e-35 154.5 532 27.8
THA.LOC104826576 Tarenaya hassleriana HOM05D007151 ORTHO05D009056 2.9e-35 154.5 557 28.4
Nitab4.5_0010178g0030 Nicotiana tabacum HOM05D007151 ORTHO05D009056 3.8e-35 154.1 510 30.0
Nitab4.5_0000416g0100 Nicotiana tabacum HOM05D007151 ORTHO05D009056 5.0e-35 153.7 509 29.3
QL02p091761 Quercus lobata HOM05D007151 ORTHO05D009056 5.0e-35 153.7 521 28.6
PSO063G2965 Papaver somniferum HOM05D007151 ORTHO05D009056 6.6e-35 153.3 521 28.2
AL3G44210 Arabidopsis lyrata HOM05D007151 ORTHO05D009056 8.6e-35 152.9 529 28.7
ClCG06G012110 Citrullus lanatus HOM05D007151 ORTHO05D009056 2.5e-34 151.4 531 28.6
Cc06_g23440 Coffea canephora HOM05D007151 ORTHO05D009056 3.3e-34 151.0 529 28.9
Medtr2g449830 Medicago truncatula HOM05D007151 ORTHO05D009056 3.3e-34 151.0 508 27.0
SGA_v2.0_scaffold206G41840 Striga asiatica HOM05D007151 ORTHO05D009056 3.3e-34 151.0 518 28.8
Nn8g39757 Nelumbo nucifera HOM05D007151 ORTHO05D009056 4.3e-34 150.6 530 26.4
Peaxi162Scf00347g00330 Petunia axillaris HOM05D007151 ORTHO05D009056 5.6e-34 150.2 513 29.4
vmacro21874 Vaccinium macrocarpon HOM05D007151 ORTHO05D009056 5.6e-34 150.2 526 29.3
Solyc07g005240.4 Solanum lycopersicum HOM05D007151 ORTHO05D009056 1.2e-33 149.1 513 29.4
PGSC0003DMG400011834 Solanum tuberosum HOM05D007151 ORTHO05D009056 1.2e-33 149.1 511 29.4
Aa31sc130G90 Aethionema arabicum HOM05D007151 ORTHO05D009056 2.1e-33 148.3 519 27.6
Glyma.15G208200 Glycine max HOM05D007151 ORTHO05D009056 2.8e-33 147.9 530 27.0
TPR.G31930 Trifolium pratense HOM05D007151 ORTHO05D009056 2.8e-33 147.9 511 27.2
Sp7g16040 Schrenkiella parvula HOM05D007151 ORTHO05D009056 8.0e-33 146.4 533 27.8
Psat1g022920 Pisum sativum HOM05D007151 ORTHO05D009056 1.0e-32 146.0 529 26.8
TWI34G1895 Tripterygium wilfordii HOM05D007151 ORTHO05D009056 1.0e-32 146.0 553 28.8
Hund21618 Selenicereus undatus HOM05D007151 ORTHO05D009056 1.4e-32 145.6 512 26.4
EL10Ac8g18840 Beta vulgaris HOM05D007151 ORTHO05D009056 3.0e-32 144.4 533 28.5
DCAR_019364 Daucus carota HOM05D007151 ORTHO05D009056 3.0e-32 144.4 520 28.8
TAR626G0740 Trochodendron aralioides HOM05D007151 ORTHO05D009056 3.0e-32 144.4 509 28.3
ECA234G3390 Erigeron canadensis HOM05D000399 ORTHO05D000304 4.0e-32 144.1 508 27.8
GSVIVG01001047001 Vitis vinifera HOM05D007151 ORTHO05D009056 4.0e-32 144.1 546 27.1
VMungo1309G1509 Vigna mungo HOM05D007151 ORTHO05D009056 8.9e-32 142.9 545 26.1
CSS0031191 Camellia sinensis var. sinensis HOM05D007151 ORTHO05D009056 1.2e-31 142.5 511 28.8
arahy.Tifrunner.gnm1.ann1.BVF972 Arachis hypogaea HOM05D007151 ORTHO05D009056 2.0e-31 141.7 510 26.9
Lsat_1_v5_gn_0_44621 Lactuca sativa HOM05D007151 ORTHO05D009056 2.0e-31 141.7 508 28.5
Lsat_1_v5_gn_5_90740 Lactuca sativa HOM05D007151 ORTHO05D009056 2.0e-31 141.7 508 28.5
Eucgr.C00404 Eucalyptus grandis HOM05D007151 ORTHO05D009056 7.5e-31 139.8 523 27.3
Haze_19293 Corylus avellana HOM05D007151 ORTHO05D009056 1.3e-30 139.0 516 28.7
HanXRQChr10g0314511 Helianthus annuus HOM05D007151 ORTHO05D009056 1.7e-30 138.7 508 27.2
Sc08g0005090 Simmondsia chinensis HOM05D007151 ORTHO05D009056 1.4e-29 135.6 531 26.9
AUR62042027 Chenopodium quinoa HOM05D007151 ORTHO05D009056 7.0e-29 133.3 538 26.8
CDE05G1962 Ceratophyllum demersum HOM05D007151 ORTHO05D009056 5.9e-28 130.2 510 25.5
arahy.Tifrunner.gnm1.ann1.36BD1U Arachis hypogaea HOM05D007151 ORTHO05D009056 1.7e-27 128.6 502 25.9
MELO3C010253.2 Cucumis melo HOM05D007151 ORTHO05D009056 1.7e-27 128.6 531 26.7
Dinv41414 Davidia involucrata HOM05D007151 ORTHO05D009056 2.5e-26 124.8 484 29.1
Phvul.009G208100 Phaseolus vulgaris HOM05D007151 ORTHO05D009056 1.6e-25 122.1 551 26.0
unitig_899.g15451 Utricularia gibba HOM05D007151 ORTHO05D009056 6.2e-25 120.2 502 25.3
ATR0629G078 Amborella trichopoda HOM05D007151 ORTHO05D009056 1.8e-24 118.6 475 26.1
Ca_25731_v3 Cicer arietinum L. HOM05D007151 ORTHO05D009056 9.8e-23 112.8 502 24.3
FvH4_5g35120 Fragaria vesca HOM05D007151 ORTHO05D009056 2.9e-22 111.3 204 37.3
Sopen07g001150 Solanum pennellii HOM05D007151 ORTHO05D009056 3.5e-20 104.4 466 27.7
Ah.14g078500 Amaranthus hybridus HOM05D007151 ORTHO05D009056 6.0e-20 103.6 518 25.7
AagrBONN_evm.TU.Sc2ySwM_117.1501 Anthoceros agrestis HOM05D007151 ORTHO05D009056 1.0e-19 102.8 276 30.4
Carub.0013s0015 Capsella rubella HOM05D007151 ORTHO05D009056 1.1e-18 99.4 205 33.7
Lalb_Chr08g0233881 Lupinus albus HOM05D007151 ORTHO05D009056 2.5e-18 98.2 204 33.8
CSS0035136 Camellia sinensis var. sinensis HOM05D007151 ORTHO05D009056 5.2e-16 90.5 204 31.4
CANSAT11G0850 Cannabis sativa HOM05D007151 ORTHO05D009056 5.2e-16 90.5 90 48.9
Lalb_Chr08g0233871 Lupinus albus HOM05D007151 ORTHO05D009056 9.9e-15 86.3 134 37.3
Rhsim01G0049000 Rhododendron simsii HOM05D007151 ORTHO05D008498 1.7e-14 85.5 459 25.7
SMO364G0487 Selaginella moellendorffii HOM05D007151 ORTHO05D009056 4.9e-14 84.0 216 33.3
HPP92_018514 Vanilla planifolia HOM05D007151 ORTHO05D009056 4.3e-10 70.9 94 42.6
FAN11G2323 Fragaria x ananassa HOM05D007151 ORTHO05D009056 5.8e-07 60.5 63 44.4
Cc06_g23410 Coffea canephora HOM05D007151 ORTHO05D009056 4.9e-06 57.4 110 34.5


User provided reference genes

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