Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cre02.g108400 Chlamydomonas reinhardtii HOM05D004396 ORTHO05D005272 1.0e-54 216.5 109 100.0
Pp3c2_30990 Physcomitrium patens HOM05D004396 ORTHO05D005272 1.4e-30 136.3 106 60.4
Mapoly0046s0003 Marchantia polymorpha HOM05D004396 ORTHO05D005272 5.7e-29 131.0 105 60.0
SEGI_22391 Sequoiadendron giganteum HOM05D004396 ORTHO05D005272 1.4e-27 126.3 105 55.2
Glyma.09G207800 Glycine max HOM05D004396 ORTHO05D005272 5.4e-27 124.4 106 53.8
Medtr3g023120 Medicago truncatula HOM05D004396 ORTHO05D005272 5.4e-27 124.4 106 53.8
arahy.Tifrunner.gnm1.ann1.Z3U2VZ Arachis hypogaea HOM05D004396 ORTHO05D005272 7.0e-27 124.0 106 53.8
BcaB07g32895 Brassica carinata HOM05D004396 ORTHO05D005272 7.0e-27 124.0 106 53.8
BcaC05g27252 Brassica carinata HOM05D004396 ORTHO05D005272 7.0e-27 124.0 106 53.8
C05p31610 Brassica napus HOM05D004396 ORTHO05D005272 7.0e-27 124.0 106 53.8
BraA09t38945Z Brassica rapa HOM05D004396 ORTHO05D005272 7.0e-27 124.0 106 53.8
SMO117G0136 Selaginella moellendorffii HOM05D004396 ORTHO05D005272 7.0e-27 124.0 105 56.2
SGA_v2.0_scaffold198G41072 Striga asiatica HOM05D004396 ORTHO05D005272 7.0e-27 124.0 106 53.8
AL1G46340 Arabidopsis lyrata HOM05D004396 ORTHO05D005272 9.1e-27 123.6 106 52.8
BcaB03g13752 Brassica carinata HOM05D004396 ORTHO05D005272 9.1e-27 123.6 106 52.8
BcaB04g17995 Brassica carinata HOM05D004396 ORTHO05D005272 9.1e-27 123.6 106 52.8
CARHR031580 Cardamine hirsuta HOM05D004396 ORTHO05D005272 9.1e-27 123.6 106 52.8
Ca_25178_v3 Cicer arietinum L. HOM05D004396 ORTHO05D005272 9.1e-27 123.6 106 53.8
Cc08_g03470 Coffea canephora HOM05D004396 ORTHO05D005272 9.1e-27 123.6 105 52.4
Thhalv10009144m.g Eutrema salsugineum HOM05D004396 ORTHO05D005272 9.1e-27 123.6 106 52.8
Carub.0001s3054 Capsella rubella HOM05D004396 ORTHO05D005272 1.2e-26 123.2 106 52.8
CDE08G0196 Ceratophyllum demersum HOM05D004396 ORTHO05D005272 1.6e-26 122.9 105 53.3
A05p25120 Brassica napus HOM05D004396 ORTHO05D005272 2.0e-26 122.5 106 51.9
BraA05t21392Z Brassica rapa HOM05D004396 ORTHO05D005272 2.0e-26 122.5 106 51.9
Lj2g0004535 Lotus japonicus HOM05D004396 ORTHO05D005272 2.0e-26 122.5 106 51.9
HPP92_025445 Vanilla planifolia HOM05D004396 ORTHO05D005272 2.0e-26 122.5 105 53.3
HPP92_025493 Vanilla planifolia HOM05D004396 ORTHO05D005272 2.0e-26 122.5 105 53.3
AT1G32210 Arabidopsis thaliana HOM05D004396 ORTHO05D005272 2.7e-26 122.1 106 51.9
ClCG10G001270 Citrullus lanatus HOM05D004396 ORTHO05D005272 2.7e-26 122.1 105 52.4
Lalb_Chr05g0215751 Lupinus albus HOM05D004396 ORTHO05D005272 2.7e-26 122.1 106 51.9
Os04g0397000 Oryza sativa ssp. japonica HOM05D004396 ORTHO05D005272 2.7e-26 122.1 105 52.4
Phvul.002G136700 Phaseolus vulgaris HOM05D004396 ORTHO05D005272 2.7e-26 122.1 106 52.8
CAN.G726.24 Capsicum annuum HOM05D004396 ORTHO05D005272 3.5e-26 121.7 97 56.7
Haze_08163 Corylus avellana HOM05D004396 ORTHO05D005272 3.5e-26 121.7 105 52.4
CsaV3_3G001340 Cucumis sativus L. HOM05D004396 ORTHO05D005272 3.5e-26 121.7 97 56.7
ECA240G0094 Erigeron canadensis HOM05D004396 ORTHO05D005272 3.5e-26 121.7 105 52.4
Lalb_Chr16g0381071 Lupinus albus HOM05D004396 ORTHO05D005272 3.5e-26 121.7 106 51.9
TPR.G19425 Trifolium pratense HOM05D004396 ORTHO05D005272 3.5e-26 121.7 106 52.8
Zm00001eb379050 Zea mays HOM05D004396 ORTHO05D005272 3.5e-26 121.7 105 53.3
ATR0626G058 Amborella trichopoda HOM05D004396 ORTHO05D005272 4.5e-26 121.3 105 51.4
Aqoxy7G03666 Aquilegia oxysepala HOM05D004396 ORTHO05D005272 4.5e-26 121.3 97 56.7
Ca_27048_v3 Cicer arietinum L. HOM05D004396 ORTHO05D005272 4.5e-26 121.3 106 53.8
DCAR_008222 Daucus carota HOM05D004396 ORTHO05D005272 5.9e-26 120.9 97 56.7
ECA240G0984 Erigeron canadensis HOM05D000006 ORTHO05D000001 5.9e-26 120.9 105 52.4
Lsat_1_v5_gn_3_19181 Lactuca sativa HOM05D004396 ORTHO05D005272 5.9e-26 120.9 105 52.4
SGA_v2.0_scaffold36G14295 Striga asiatica HOM05D004396 ORTHO05D005272 5.9e-26 120.9 97 56.7
THA.LOC104814414 Tarenaya hassleriana HOM05D004396 ORTHO05D005272 5.9e-26 120.9 106 52.8
Peaxi162Scf00170g00812 Petunia axillaris HOM05D004396 ORTHO05D005272 7.7e-26 120.6 97 56.7
Sp1g27890 Schrenkiella parvula HOM05D004396 ORTHO05D005272 7.7e-26 120.6 97 56.7
Solyc08g076460.3 Solanum lycopersicum HOM05D004396 ORTHO05D005272 7.7e-26 120.6 97 54.6
Sopen08g025040 Solanum pennellii HOM05D004396 ORTHO05D005272 7.7e-26 120.6 97 54.6
PGSC0003DMG400014795 Solanum tuberosum HOM05D004396 ORTHO05D005272 7.7e-26 120.6 97 54.6
VMungo1215G3227 Vigna mungo HOM05D004396 ORTHO05D005272 7.7e-26 120.6 106 51.9
GSVIVG01013064001 Vitis vinifera HOM05D004396 ORTHO05D005272 7.7e-26 120.6 97 56.7
Actinidia14779 Actinidia chinensis HOM05D004396 ORTHO05D005272 1.0e-25 120.2 105 52.4
AT2G35520 Arabidopsis thaliana HOM05D004396 ORTHO05D005272 1.0e-25 120.2 106 51.9
CARHR129690 Cardamine hirsuta HOM05D004396 ORTHO05D005272 1.0e-25 120.2 106 51.9
COL.COLO4_16940 Corchorus olitorius HOM05D004396 ORTHO05D005272 1.0e-25 120.2 97 57.7
Medtr5g029240 Medicago truncatula HOM05D004396 ORTHO05D005272 1.0e-25 120.2 106 51.9
Dinv25260 Davidia involucrata HOM05D004396 ORTHO05D005272 1.3e-25 119.8 105 51.4
Dinv29003 Davidia involucrata HOM05D004396 ORTHO05D005272 1.3e-25 119.8 97 55.7
FvH4_2g00930 Fragaria vesca HOM05D004396 ORTHO05D005272 1.3e-25 119.8 97 56.7
FAN20G1930 Fragaria x ananassa HOM05D004396 ORTHO05D005272 1.3e-25 119.8 97 56.7
FAN24G1987 Fragaria x ananassa HOM05D004396 ORTHO05D005272 1.3e-25 119.8 97 56.7
FAN27G1914 Fragaria x ananassa HOM05D004396 ORTHO05D005272 1.3e-25 119.8 97 56.7
PSO339G1317 Papaver somniferum HOM05D004396 ORTHO05D005272 1.3e-25 119.8 97 55.7
PSO384G3027 Papaver somniferum HOM05D004396 ORTHO05D005272 1.3e-25 119.8 97 55.7
PSO541G6011 Papaver somniferum HOM05D004396 ORTHO05D005272 1.3e-25 119.8 97 55.7
Psat5g213400 Pisum sativum HOM05D004396 ORTHO05D005272 1.3e-25 119.8 106 51.9
Potri.003G096800 Populus trichocarpa HOM05D004396 ORTHO05D005272 1.3e-25 119.8 105 52.4
TWI60G0023 Tripterygium wilfordii HOM05D004396 ORTHO05D005272 1.3e-25 119.8 106 50.9
TWI81G0111 Tripterygium wilfordii HOM05D004396 ORTHO05D005272 1.3e-25 119.8 106 50.9
Actinidia18135 Actinidia chinensis HOM05D004396 ORTHO05D005272 1.7e-25 119.4 97 55.7
MSTRG.12178 Avicennia marina HOM05D004396 ORTHO05D005272 1.7e-25 119.4 106 50.9
Thhalv10017441m.g Eutrema salsugineum HOM05D004396 ORTHO05D005272 1.7e-25 119.4 106 51.9
HanXRQChr13g0414241 Helianthus annuus HOM05D004396 ORTHO05D005272 1.7e-25 119.4 97 56.7
Nn3g19387 Nelumbo nucifera HOM05D004396 ORTHO05D005272 1.7e-25 119.4 105 51.4
Oeu027093.1 Olea europaea HOM05D004396 ORTHO05D005272 1.7e-25 119.4 97 54.6
PSO675G8737 Papaver somniferum HOM05D004396 ORTHO05D005272 1.7e-25 119.4 97 55.7
RcHm_v2.0_Chr6g0251281 Rosa chinensis HOM05D004396 ORTHO05D005272 1.7e-25 119.4 97 55.7
AL4G31570 Arabidopsis lyrata HOM05D004396 ORTHO05D005272 2.3e-25 119.0 106 51.9
Carub.0004s1721 Capsella rubella HOM05D004396 ORTHO05D005272 2.3e-25 119.0 106 50.0
Gorai.003G185400 Gossypium raimondii HOM05D004396 ORTHO05D005272 2.3e-25 119.0 97 56.7
HanXRQChr06g0172781 Helianthus annuus HOM05D004396 ORTHO05D005272 2.3e-25 119.0 97 55.7
MD10G1005100 Malus domestica HOM05D004396 ORTHO05D005272 2.3e-25 119.0 97 55.7
Nitab4.5_0000556g0250 Nicotiana tabacum HOM05D004396 ORTHO05D005272 2.3e-25 119.0 105 50.5
Nitab4.5_0004528g0030 Nicotiana tabacum HOM05D004396 ORTHO05D005272 2.3e-25 119.0 105 50.5
Prupe.4G286900 Prunus persica HOM05D004396 ORTHO05D005272 2.3e-25 119.0 97 54.6
THA.LOC104798491 Tarenaya hassleriana HOM05D004396 ORTHO05D005272 2.3e-25 119.0 106 52.8
vmacro00278 Vaccinium macrocarpon HOM05D004396 ORTHO05D005272 2.3e-25 119.0 105 51.4
CSS0013599 Camellia sinensis var. sinensis HOM05D004396 ORTHO05D005272 2.9e-25 118.6 105 50.5
CSS0033679 Camellia sinensis var. sinensis HOM05D004396 ORTHO05D005272 2.9e-25 118.6 97 55.7
CSS0046263 Camellia sinensis var. sinensis HOM05D004396 ORTHO05D005272 2.9e-25 118.6 105 50.5
Duzib084G0048 Durio zibethinus HOM05D004396 ORTHO05D005272 2.9e-25 118.6 97 55.7
Thecc.03G310300 Theobroma cacao HOM05D004396 ORTHO05D005272 2.9e-25 118.6 97 56.7
MD05G1007700 Malus domestica HOM05D004396 ORTHO05D005272 3.8e-25 118.2 97 53.6
Rhsim11G0021700 Rhododendron simsii HOM05D004396 ORTHO05D005272 3.8e-25 118.2 105 51.4
Sabra03G0065300 Salix brachista HOM05D004396 ORTHO05D005272 3.8e-25 118.2 97 55.7
CiPaw.11G098400 Carya illinoinensis HOM05D004396 ORTHO05D005272 5.0e-25 117.9 97 54.6
Eucgr.H00688 Eucalyptus grandis HOM05D004396 ORTHO05D005272 5.0e-25 117.9 97 55.7
Hma1.2p1_0870F.1_g230890 Hydrangea macrophylla HOM05D004396 ORTHO05D005272 5.0e-25 117.9 97 55.7
Hma1.2p1_0890F.1_g233090 Hydrangea macrophylla HOM05D004396 ORTHO05D005272 5.0e-25 117.9 97 55.7
Hund10776 Selenicereus undatus HOM05D004396 ORTHO05D005272 5.0e-25 117.9 97 53.6
PGSC0003DMG400018505 Solanum tuberosum HOM05D004396 ORTHO05D005272 5.0e-25 117.9 105 49.5
TPR.G31993 Trifolium pratense HOM05D004396 ORTHO05D005272 5.0e-25 117.9 106 50.9
Duzib205G0471 Durio zibethinus HOM05D004396 ORTHO05D005272 6.5e-25 117.5 97 55.7
QL12p001650 Quercus lobata HOM05D004396 ORTHO05D005272 6.5e-25 117.5 96 54.2
Gohir.A12G206100 Gossypium hirsutum HOM05D004396 ORTHO05D005272 8.6e-25 117.1 97 56.7
Gohir.D12G208400 Gossypium hirsutum HOM05D004396 ORTHO05D005272 8.6e-25 117.1 97 56.7
Gorai.008G224000 Gossypium raimondii HOM05D004396 ORTHO05D005272 8.6e-25 117.1 97 56.7
Nitab4.5_0000529g0110 Nicotiana tabacum HOM05D004396 ORTHO05D005272 1.1e-24 116.7 97 53.6
PGR031G0362 Punica granatum HOM05D004396 ORTHO05D005272 1.1e-24 116.7 97 54.6
PGR031G2119 Punica granatum HOM05D004396 ORTHO05D005272 1.1e-24 116.7 97 54.6
Ciclev10002883m.g Citrus clementina HOM05D004396 ORTHO05D005272 1.5e-24 116.3 97 55.7
Lj4g0004552 Lotus japonicus HOM05D004396 ORTHO05D005272 1.5e-24 116.3 106 49.1
Manes.04G055632 Manihot esculenta HOM05D004396 ORTHO05D005272 1.5e-24 116.3 97 54.6
CBR_g15971 Chara braunii HOM05D004396 ORTHO05D005272 1.9e-24 115.9 108 55.6
Migut.A01174 Erythranthe guttata HOM05D004396 ORTHO05D005272 1.9e-24 115.9 105 51.4
Manes.12G090054 Manihot esculenta HOM05D004396 ORTHO05D005272 1.9e-24 115.9 97 54.6
Sc01g0005580 Simmondsia chinensis HOM05D004396 ORTHO05D005272 1.9e-24 115.9 97 54.6
Potri.001G136800 Populus trichocarpa HOM05D004396 ORTHO05D005272 2.5e-24 115.5 105 49.5
TAR375G0183 Trochodendron aralioides HOM05D004396 ORTHO05D005272 2.5e-24 115.5 97 53.6
Prupe.8G007900 Prunus persica HOM05D004396 ORTHO05D005272 3.3e-24 115.2 97 54.6
Rhsim07G0132100 Rhododendron simsii HOM05D004396 ORTHO05D005272 4.2e-24 114.8 105 50.5
unitig_899.g15442 Utricularia gibba HOM05D004396 ORTHO05D005272 4.2e-24 114.8 106 50.9
Glyma.14G201900 Glycine max HOM05D004396 ORTHO05D005272 5.5e-24 114.4 98 54.1
SalBow1G7612 Salvia bowleyana HOM05D004396 ORTHO05D005272 7.2e-24 114.0 106 50.0
AagrBONN_evm.TU.Sc2ySwM_362.1218 Anthoceros agrestis HOM05D000444 ORTHO05D000489 2.1e-23 112.5 98 54.1
Peaxi162Scf00045g00321 Petunia axillaris HOM05D004396 ORTHO05D005272 3.6e-23 111.7 89 55.1
Gohir.A03G000033 Gossypium hirsutum HOM05D004396 ORTHO05D005272 6.1e-23 110.9 89 57.3
Lsat_1_v5_gn_6_80060 Lactuca sativa HOM05D004396 ORTHO05D005272 2.3e-22 109.0 97 51.5
Migut.E00744 Erythranthe guttata HOM05D004396 ORTHO05D005272 3.0e-22 108.6 88 56.8
Cpa.g.sc42.149 Carica papaya HOM05D004396 ORTHO05D005272 5.2e-22 107.8 89 57.3
EL10Ac5g11811 Beta vulgaris HOM05D004396 ORTHO05D005272 5.7e-21 104.4 141 38.3
Sabra01G0105900 Salix brachista HOM05D004396 ORTHO05D005272 9.8e-21 103.6 115 44.3
CAN.G1987.1 Capsicum annuum HOM05D004396 ORTHO05D005272 1.1e-19 100.1 73 63.0
Cfa012506 Carpinus fangiana HOM05D004396 ORTHO05D005272 4.1e-19 98.2 73 61.6
MBI02_g15155_MAGBIO Magnolia biondii HOM05D004396 ORTHO05D005272 7.0e-19 97.4 70 62.9
Psat2g139040 Pisum sativum HOM05D004396 ORTHO05D005272 2.0e-18 95.9 67 65.7
Gohir.D03G176200 Gossypium hirsutum HOM05D004396 ORTHO05D005272 1.1e-16 90.1 98 48.0
BolC3t13671H Brassica oleracea HOM05D004396 ORTHO05D005272 7.3e-16 87.4 105 42.9
BolC5t31884H Brassica oleracea HOM05D004396 ORTHO05D005272 4.7e-15 84.7 77 50.6
arahy.Tifrunner.gnm1.ann1.KG0UNZ Arachis hypogaea HOM05D004396 ORTHO05D005272 1.4e-14 83.2 77 49.4
CiPaw.12G068300 Carya illinoinensis HOM05D004396 ORTHO05D005272 1.4e-14 83.2 80 47.5
AUR62036328 Chenopodium quinoa HOM05D004396 ORTHO05D005272 1.4e-14 83.2 68 55.9
A08p09310 Brassica napus HOM05D004396 ORTHO05D005272 1.8e-14 82.8 103 39.8
BraA08t32929Z Brassica rapa HOM05D004396 ORTHO05D005272 1.8e-14 82.8 103 39.8
Sed0012676 Sechium edule HOM05D004396 ORTHO05D005272 2.6e-13 79.0 76 46.1
Ciclev10013120m.g Citrus clementina HOM05D004396 ORTHO05D005272 8.3e-12 73.9 68 51.5
Nn1g00212 Nelumbo nucifera HOM05D004396 ORTHO05D005272 4.1e-11 71.6 70 45.7
Pp3c1_6120 Physcomitrium patens HOM05D004396 ORTHO05D005272 1.2e-10 70.1 64 50.0
Aa31LG2G13800 Aethionema arabicum HOM05D004396 ORTHO05D005272 2.3e-09 65.9 76 43.4
Ah.02g116090 Amaranthus hybridus HOM05D002241 ORTHO05D002458 4.3e-08 61.6 49 53.1
BolC8t47998H Brassica oleracea HOM05D004396 ORTHO05D005272 1.2e-07 60.1 105 34.3
Sc24g0004110 Simmondsia chinensis HOM05D004396 ORTHO05D005272 2.8e-07 58.9 49 51.0
FAN15G2154 Fragaria x ananassa HOM05D004396 ORTHO05D005272 4.7e-07 58.2 49 53.1
Hund15006 Selenicereus undatus HOM05D004396 ORTHO05D005272 4.7e-07 58.2 41 65.9
Atru.chr6.1524 Acer truncatum HOM05D004396 ORTHO05D005272 5.2e-06 54.7 49 51.0


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