Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cre02.g102450 Chlamydomonas reinhardtii HOM05D005813 ORTHO05D007310 2.8e-242 841.6 457 100.0
FAN01G0479 Fragaria x ananassa HOM05D005813 ORTHO05D007310 8.2e-61 238.8 360 38.9
FvH4_7g11840 Fragaria vesca HOM05D005813 ORTHO05D007310 2.4e-60 237.3 360 38.6
FAN06G0614 Fragaria x ananassa HOM05D005813 ORTHO05D007310 2.4e-60 237.3 360 38.6
FAN10G2798 Fragaria x ananassa HOM05D005813 ORTHO05D007310 4.1e-60 236.5 360 38.6
PGR031G3848 Punica granatum HOM05D005813 ORTHO05D007310 1.2e-59 235.0 389 38.3
Atru.chr5.306 Acer truncatum HOM05D005813 ORTHO05D007310 1.5e-59 234.6 385 36.9
MD02G1204700 Malus domestica HOM05D005813 ORTHO05D007310 2.0e-59 234.2 363 38.6
EL10Ac1g00888 Beta vulgaris HOM05D005813 ORTHO05D007310 4.5e-59 233.0 413 34.6
HanXRQChr04g0122421 Helianthus annuus HOM05D005813 ORTHO05D007310 5.9e-59 232.6 359 36.8
Prupe.2G145000 Prunus persica HOM05D005813 ORTHO05D007310 5.9e-59 232.6 361 39.3
Potri.002G148100 Populus trichocarpa HOM05D005813 ORTHO05D007310 1.7e-58 231.1 362 37.6
FAN06G1564 Fragaria x ananassa HOM05D005813 ORTHO05D007310 5.0e-58 229.6 372 36.8
Cpa.g.sc18.111 Carica papaya HOM05D005813 ORTHO05D007310 1.1e-57 228.4 359 37.9
Ah.05g174210 Amaranthus hybridus HOM05D005813 ORTHO05D007310 1.4e-57 228.0 405 35.6
Mapoly0037s0016 Marchantia polymorpha HOM05D005813 ORTHO05D007310 1.9e-57 227.6 363 36.4
Aqoxy7G00631 Aquilegia oxysepala HOM05D005813 ORTHO05D007310 3.2e-57 226.9 408 35.3
Thhalv10028676m.g Eutrema salsugineum HOM05D005813 ORTHO05D007310 3.2e-57 226.9 356 37.9
Gohir.A08G134600 Gossypium hirsutum HOM05D005813 ORTHO05D007310 3.2e-57 226.9 361 36.6
RcHm_v2.0_Chr1g0350521 Rosa chinensis HOM05D005813 ORTHO05D007310 3.2e-57 226.9 357 37.3
CiPaw.02G167800 Carya illinoinensis HOM05D005813 ORTHO05D007310 4.2e-57 226.5 412 36.4
Pp3c19_7620 Physcomitrium patens HOM05D005813 ORTHO05D007310 4.2e-57 226.5 411 35.3
TPR.G29407 Trifolium pratense HOM05D005813 ORTHO05D007310 4.2e-57 226.5 359 37.9
FAN10G1195 Fragaria x ananassa HOM05D005813 ORTHO05D007310 5.5e-57 226.1 428 34.8
HPP92_003519 Vanilla planifolia HOM05D005813 ORTHO05D007310 5.5e-57 226.1 389 35.2
Gohir.D08G155500 Gossypium hirsutum HOM05D005813 ORTHO05D007310 7.2e-57 225.7 361 36.3
Gorai.004G161700 Gossypium raimondii HOM05D005813 ORTHO05D007310 7.2e-57 225.7 361 36.3
Potri.014G069400 Populus trichocarpa HOM05D005813 ORTHO05D007310 7.2e-57 225.7 362 37.0
Sc02g0002610 Simmondsia chinensis HOM05D005813 ORTHO05D007310 7.2e-57 225.7 416 34.9
Medtr7g074890 Medicago truncatula HOM05D005813 ORTHO05D007310 9.4e-57 225.3 360 38.1
PSO782G1692 Papaver somniferum HOM05D005813 ORTHO05D007310 1.2e-56 224.9 373 37.3
Lsat_1_v5_gn_7_7160 Lactuca sativa HOM05D005813 ORTHO05D007310 1.6e-56 224.6 409 35.9
unitig_749.g14372 Utricularia gibba HOM05D005813 ORTHO05D007310 1.6e-56 224.6 361 37.1
Aa31LG5G9310 Aethionema arabicum HOM05D005813 ORTHO05D007310 2.1e-56 224.2 358 36.9
Hund27345 Selenicereus undatus HOM05D005813 ORTHO05D007310 2.1e-56 224.2 389 35.0
ClCG05G002290 Citrullus lanatus HOM05D005813 ORTHO05D007310 2.7e-56 223.8 363 35.8
Sed0028100 Sechium edule HOM05D005813 ORTHO05D007310 2.7e-56 223.8 359 35.9
Nitab4.5_0004917g0040 Nicotiana tabacum HOM05D005813 ORTHO05D007310 6.1e-56 222.6 383 36.0
Eucgr.D02453 Eucalyptus grandis HOM05D005813 ORTHO05D007310 7.9e-56 222.2 366 35.2
Gohir.A08G031100 Gossypium hirsutum HOM05D005813 ORTHO05D007310 7.9e-56 222.2 366 36.1
Nn1g01240 Nelumbo nucifera HOM05D005813 ORTHO05D007310 7.9e-56 222.2 402 35.1
Duzib133G0639 Durio zibethinus HOM05D005813 ORTHO05D007310 1.0e-55 221.9 362 36.7
Gohir.D08G042200 Gossypium hirsutum HOM05D005813 ORTHO05D007310 1.0e-55 221.9 366 36.1
PSO478G4467 Papaver somniferum HOM05D005813 ORTHO05D007310 1.0e-55 221.9 373 37.0
MELO3C006191.2 Cucumis melo HOM05D005813 ORTHO05D007310 1.4e-55 221.5 363 36.1
CsaV3_3G009700 Cucumis sativus L. HOM05D005813 ORTHO05D007310 1.4e-55 221.5 363 36.1
SEGI_07293 Sequoiadendron giganteum HOM05D005813 ORTHO05D007310 1.4e-55 221.5 402 34.8
arahy.Tifrunner.gnm1.ann1.4B5N4V Arachis hypogaea HOM05D005813 ORTHO05D007310 1.8e-55 221.1 405 35.1
Zm00001eb065090 Zea mays HOM05D005813 ORTHO05D007310 1.8e-55 221.1 375 35.2
MD07G1121300 Malus domestica HOM05D005813 ORTHO05D007310 2.3e-55 220.7 408 35.5
Thecc.01G376600 Theobroma cacao HOM05D005813 ORTHO05D007310 2.3e-55 220.7 377 36.1
VMungo1383G1345 Vigna mungo HOM05D005813 ORTHO05D007310 2.3e-55 220.7 360 34.7
Lalb_Chr03g0039571 Lupinus albus HOM05D005813 ORTHO05D007310 3.9e-55 219.9 361 36.3
C09p00110 Brassica napus HOM05D005813 ORTHO05D007310 5.1e-55 219.5 357 36.4
BraA09t35685Z Brassica rapa HOM05D005813 ORTHO05D007310 5.1e-55 219.5 357 36.4
CSS0030666 Camellia sinensis var. sinensis HOM05D005813 ORTHO05D007310 5.1e-55 219.5 403 35.2
CSS0042195 Camellia sinensis var. sinensis HOM05D005813 ORTHO05D007310 5.1e-55 219.5 403 35.2
THA.LOC104817009 Tarenaya hassleriana HOM05D005813 ORTHO05D007310 5.1e-55 219.5 366 36.3
Cc02_g23900 Coffea canephora HOM05D005813 ORTHO05D007310 6.7e-55 219.2 402 36.1
BcaC04g24202 Brassica carinata HOM05D005813 ORTHO05D007310 8.8e-55 218.8 357 36.1
BolC9t52946H Brassica oleracea HOM05D005813 ORTHO05D007310 8.8e-55 218.8 357 36.1
Phvul.008G076400 Phaseolus vulgaris HOM05D005813 ORTHO05D007310 8.8e-55 218.8 362 35.6
Glyma.09G269300 Glycine max HOM05D005813 ORTHO05D007310 1.1e-54 218.4 430 34.0
Lj1g0017617 Lotus japonicus HOM05D005813 ORTHO05D007310 1.1e-54 218.4 398 34.2
CARHR248130 Cardamine hirsuta HOM05D005813 ORTHO05D007310 1.5e-54 218.0 370 35.7
ATR0810G089 Amborella trichopoda HOM05D005813 ORTHO05D007310 1.9e-54 217.6 382 35.1
AUR62004213 Chenopodium quinoa HOM05D005813 ORTHO05D007310 1.9e-54 217.6 417 34.5
Ciclev10020183m.g Citrus clementina HOM05D005813 ORTHO05D007310 1.9e-54 217.6 363 36.1
TAR374G0529 Trochodendron aralioides HOM05D005813 ORTHO05D007310 1.9e-54 217.6 415 34.9
BcaB01g02210 Brassica carinata HOM05D005813 ORTHO05D007310 2.5e-54 217.2 358 35.5
Carub.0006s3714 Capsella rubella HOM05D005813 ORTHO05D007310 2.5e-54 217.2 356 36.0
Glyma.18G220700 Glycine max HOM05D005813 ORTHO05D007310 2.5e-54 217.2 391 34.8
Sabra02G0117100 Salix brachista HOM05D005813 ORTHO05D007310 3.3e-54 216.9 403 35.0
Duzib138G0196 Durio zibethinus HOM05D005813 ORTHO05D007310 4.3e-54 216.5 431 34.1
Sopen01g037050 Solanum pennellii HOM05D005813 ORTHO05D007310 5.7e-54 216.1 363 36.1
QL08p052527 Quercus lobata HOM05D005813 ORTHO05D007310 1.3e-53 214.9 400 35.8
AL6G53420 Arabidopsis lyrata HOM05D005813 ORTHO05D007310 1.7e-53 214.5 412 34.2
Ca_11657_v3 Cicer arietinum L. HOM05D005813 ORTHO05D007310 1.7e-53 214.5 359 35.4
Sabra02G0115400 Salix brachista HOM05D005813 ORTHO05D007310 2.2e-53 214.2 409 34.7
SalBow5G4545 Salvia bowleyana HOM05D005813 ORTHO05D007310 2.2e-53 214.2 363 37.5
Sp6g00150 Schrenkiella parvula HOM05D005813 ORTHO05D007310 2.2e-53 214.2 403 34.2
AT4G00090 Arabidopsis thaliana HOM05D005813 ORTHO05D007310 2.8e-53 213.8 412 33.5
Nn4g26391 Nelumbo nucifera HOM05D005813 ORTHO05D007310 2.8e-53 213.8 399 33.3
CiPaw.01G262200 Carya illinoinensis HOM05D005813 ORTHO05D007310 4.8e-53 213.0 403 34.0
MBI04_g35272_MAGBIO Magnolia biondii HOM05D005813 ORTHO05D007310 1.1e-52 211.8 418 32.5
SGA_v2.0_scaffold153G37009 Striga asiatica HOM05D005813 ORTHO05D007310 1.1e-52 211.8 413 34.4
arahy.Tifrunner.gnm1.ann1.DKE7V3 Arachis hypogaea HOM05D005813 ORTHO05D007310 1.8e-52 211.1 399 34.6
CBR_g23070 Chara braunii HOM05D005813 ORTHO05D007310 1.8e-52 211.1 407 33.4
Migut.B01633 Erythranthe guttata HOM05D005813 ORTHO05D007310 1.8e-52 211.1 433 34.2
AagrBONN_evm.TU.Sc2ySwM_117.33 Anthoceros agrestis HOM05D005813 ORTHO05D007310 2.4e-52 210.7 432 33.8
Manes.05G045300 Manihot esculenta HOM05D005813 ORTHO05D007310 3.1e-52 210.3 415 34.2
Cfa001724 Carpinus fangiana HOM05D005813 ORTHO05D007310 4.1e-52 209.9 433 34.4
Solyc01g091310.3 Solanum lycopersicum HOM05D005813 ORTHO05D007310 4.1e-52 209.9 431 32.9
MSTRG.17192 Avicennia marina HOM05D005813 ORTHO05D007310 5.3e-52 209.5 380 35.8
Lj7A528T62 Lonicera japonica HOM05D005813 ORTHO05D007310 5.3e-52 209.5 377 34.2
CANSAT56G4177 Cannabis sativa HOM05D005813 ORTHO05D007310 6.9e-52 209.1 362 34.8
Nitab4.5_0000457g0240 Nicotiana tabacum HOM05D005813 ORTHO05D007310 1.5e-51 208.0 377 34.5
CDE11G1084 Ceratophyllum demersum HOM05D005813 ORTHO05D007310 3.4e-51 206.8 420 31.7
SMO367G0685 Selaginella moellendorffii HOM05D005813 ORTHO05D007310 3.4e-51 206.8 361 33.2
Actinidia12685 Actinidia chinensis HOM05D005813 ORTHO05D007310 5.9e-51 206.1 381 36.2
TWI59G1428 Tripterygium wilfordii HOM05D005813 ORTHO05D007310 5.9e-51 206.1 414 33.6
CDE09G1050 Ceratophyllum demersum HOM05D005813 ORTHO05D007310 1.0e-50 205.3 414 32.4
Gorai.004G040800 Gossypium raimondii HOM05D005813 ORTHO05D007310 6.5e-50 202.6 412 32.0
FAN03G1318 Fragaria x ananassa HOM05D005813 ORTHO05D007310 4.2e-49 199.9 318 38.1
Oeu055488.1 Olea europaea HOM05D005813 ORTHO05D007310 4.2e-49 199.9 408 33.6
CBR_g21297 Chara braunii HOM05D005813 ORTHO05D007310 9.4e-49 198.7 373 33.2
Rhsim01G0147300 Rhododendron simsii HOM05D005813 ORTHO05D007310 1.2e-48 198.4 391 34.3
Sed0000354 Sechium edule HOM05D005813 ORTHO05D007310 4.7e-48 196.4 336 34.2
GSVIVG01027606001 Vitis vinifera HOM05D005813 ORTHO05D007310 1.0e-47 195.3 391 33.5
vmacro21010 Vaccinium macrocarpon HOM05D005813 ORTHO05D007310 5.1e-47 193.0 334 35.9
unitig_76.g29089 Utricularia gibba HOM05D005813 ORTHO05D007310 1.7e-45 188.0 321 36.1
Psat3g115920 Pisum sativum HOM05D005813 ORTHO05D007310 3.7e-45 186.8 357 35.6
Dinv43710 Davidia involucrata HOM05D005813 ORTHO05D007310 9.1e-44 182.2 361 33.8
AUR62013635 Chenopodium quinoa HOM05D005813 ORTHO05D007310 2.6e-43 180.6 423 29.8
Haze_16813 Corylus avellana HOM05D005813 ORTHO05D007310 2.2e-42 177.6 401 31.4
SHI01708 Sapria himalayana HOM05D005813 ORTHO05D007310 2.9e-42 177.2 389 30.3
PGSC0003DMG400012776 Solanum tuberosum HOM05D005813 ORTHO05D007310 5.0e-42 176.4 257 38.9
PSO170G3521 Papaver somniferum HOM05D005813 ORTHO05D007310 1.2e-40 171.8 339 34.5
A09p00750 Brassica napus HOM05D005813 ORTHO05D007310 2.1e-40 171.0 261 37.5
Peaxi162Scf00013g03441 Petunia axillaris HOM05D005813 ORTHO05D007310 4.8e-37 159.8 375 33.3
MCO05G082 Micromonas commoda HOM05D005813 ORTHO05D007310 9.1e-36 155.6 423 30.5
PSO782G5041 Papaver somniferum HOM05D005813 ORTHO05D007310 4.7e-32 143.3 365 31.5
Actinidia33466 Actinidia chinensis HOM05D005813 ORTHO05D007310 6.1e-32 142.9 185 41.6
PSO675G1684 Papaver somniferum HOM05D005813 ORTHO05D007310 1.5e-30 138.3 239 35.1
Psat3g202640 Pisum sativum HOM05D005813 ORTHO05D007310 5.3e-28 129.8 281 33.1
COL.COLO4_12543 Corchorus olitorius HOM05D005813 ORTHO05D007310 1.6e-27 128.3 362 28.7
DCAR_015903 Daucus carota HOM05D005813 ORTHO05D007310 4.0e-23 113.6 331 26.9
PSO478G0826 Papaver somniferum HOM05D005813 ORTHO05D007310 1.2e-19 102.1 165 35.2
MCO05G071 Micromonas commoda HOM05D000526 ORTHO05D000956 5.8e-06 56.6 196 21.4


User provided reference genes

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