Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cre02.g099650 Chlamydomonas reinhardtii HOM05D004071 ORTHO05D004501 3.5e-165 585.1 347 100.0
SEGI_38032 Sequoiadendron giganteum HOM05D004071 ORTHO05D004501 3.2e-17 93.6 218 29.8
Mapoly0013s0171 Marchantia polymorpha HOM05D004071 ORTHO05D004501 2.1e-16 90.9 215 28.4
PRCOL_00004263 Prasinoderma coloniale HOM05D068002 ORTHO05D004501 1.4e-15 88.2 381 22.8
Zm00001eb297500 Zea mays HOM05D004071 ORTHO05D004501 1.8e-15 87.8 217 29.0
AagrBONN_evm.TU.Sc2ySwM_117.1813 Anthoceros agrestis HOM05D004071 ORTHO05D004501 8.8e-15 85.5 217 29.0
Pp3c7_9290 Physcomitrium patens HOM05D004071 ORTHO05D004501 8.8e-15 85.5 217 26.3
Os05g0589000 Oryza sativa ssp. japonica HOM05D004071 ORTHO05D004501 9.7e-14 82.0 217 28.1
HPP92_003788 Vanilla planifolia HOM05D004071 ORTHO05D004501 1.7e-13 81.3 217 27.2
EL10Ac2g04623 Beta vulgaris HOM05D004071 ORTHO05D004501 2.2e-13 80.9 229 28.4
CAN.G153.14 Capsicum annuum HOM05D004071 ORTHO05D004501 1.8e-12 77.8 217 28.1
Migut.H00537 Erythranthe guttata HOM05D004071 ORTHO05D004501 3.1e-12 77.0 220 28.2
HanXRQChr07g0200191 Helianthus annuus HOM05D004071 ORTHO05D004501 4.1e-12 76.6 217 26.3
HanXRQChr09g0263441 Helianthus annuus HOM05D004071 ORTHO05D004501 4.1e-12 76.6 217 26.7
ECA232G0981 Erigeron canadensis HOM05D004071 ORTHO05D004501 7.0e-12 75.9 217 26.3
Lsat_1_v5_gn_2_86560 Lactuca sativa HOM05D004071 ORTHO05D004501 7.0e-12 75.9 217 25.3
Peaxi162Scf01056g00238 Petunia axillaris HOM05D004071 ORTHO05D004501 9.1e-12 75.5 217 26.7
Lsat_1_v5_gn_4_175840 Lactuca sativa HOM05D004071 ORTHO05D004501 1.2e-11 75.1 217 26.7
DCAR_007521 Daucus carota HOM05D000912 ORTHO05D004501 2.0e-11 74.3 217 25.8
Sed0017773 Sechium edule HOM05D004071 ORTHO05D004501 2.6e-11 73.9 217 25.8
Hma1.2p1_0550F.1_g177140 Hydrangea macrophylla HOM05D004071 ORTHO05D004501 3.5e-11 73.6 230 27.4
CsaV3_5G039030 Cucumis sativus L. HOM05D004071 ORTHO05D004501 5.9e-11 72.8 217 26.3
unitig_32.g10761 Utricularia gibba HOM05D004071 ORTHO05D004501 7.7e-11 72.4 217 25.3
Ciclev10012116m.g Citrus clementina HOM05D004071 ORTHO05D004501 1.3e-10 71.6 217 26.7
Cc07_g04980 Coffea canephora HOM05D004071 ORTHO05D004501 2.2e-10 70.9 217 26.3
Atru.chr10.1868 Acer truncatum HOM05D004071 ORTHO05D004501 2.9e-10 70.5 217 27.2
CiPaw.04G003700 Carya illinoinensis HOM05D004071 ORTHO05D004501 2.9e-10 70.5 217 24.9
Duzib268G0320 Durio zibethinus HOM05D004071 ORTHO05D004501 2.9e-10 70.5 217 25.8
PGSC0003DMG400018768 Solanum tuberosum HOM05D004071 ORTHO05D004501 2.9e-10 70.5 220 27.3
Hund13742 Selenicereus undatus HOM05D004071 ORTHO05D004501 5.0e-10 69.7 221 26.7
GSVIVG01036463001 Vitis vinifera HOM05D004071 ORTHO05D004501 6.5e-10 69.3 217 27.2
MELO3C022067.2 Cucumis melo HOM05D004071 ORTHO05D004501 2.5e-09 67.4 350 24.3
FvH4_6g45520 Fragaria vesca HOM05D004071 ORTHO05D004501 2.5e-09 67.4 217 24.4
FAN02G1076 Fragaria x ananassa HOM05D000085 ORTHO05D004501 2.5e-09 67.4 217 24.9
FAN05G3345 Fragaria x ananassa HOM05D004071 ORTHO05D004501 2.5e-09 67.4 217 24.4
FAN09G0395 Fragaria x ananassa HOM05D000085 ORTHO05D004501 2.5e-09 67.4 339 22.4
Aqoxy3G00414 Aquilegia oxysepala HOM05D004071 ORTHO05D004501 5.5e-09 66.2 217 23.5
Sopen03g009550 Solanum pennellii HOM05D004071 ORTHO05D004501 5.5e-09 66.2 217 25.8
SMO164G0101 Selaginella moellendorffii HOM05D004071 ORTHO05D004501 7.2e-09 65.9 227 26.4
HPP92_011599 Vanilla planifolia HOM05D004071 ORTHO05D004501 7.2e-09 65.9 345 21.4
Solyc03g045090.3 Solanum lycopersicum HOM05D004071 ORTHO05D004501 9.4e-09 65.5 217 25.8
FAN14G5468 Fragaria x ananassa HOM05D000085 ORTHO05D004501 1.6e-08 64.7 217 24.0
Nitab4.5_0004420g0040 Nicotiana tabacum HOM05D004071 ORTHO05D004501 4.7e-08 63.2 168 26.8
unitig_62.g23397 Utricularia gibba HOM05D004071 ORTHO05D004501 4.7e-08 63.2 165 28.5
Potri.017G110600 Populus trichocarpa HOM05D004071 ORTHO05D004501 6.1e-08 62.8 171 28.1
TWI74G0934 Tripterygium wilfordii HOM05D004071 ORTHO05D004501 6.1e-08 62.8 217 24.9
Dinv33918 Davidia involucrata HOM05D004071 ORTHO05D004501 2.3e-07 60.8 178 27.5
Sed0022702 Sechium edule HOM05D004071 ORTHO05D004501 5.2e-07 59.7 327 20.8
PSO017G6828 Papaver somniferum HOM05D004071 ORTHO05D004501 7.5e-06 55.8 265 23.4
PSO478G0222 Papaver somniferum HOM05D004071 ORTHO05D004501 9.7e-06 55.5 233 23.2


User provided reference genes

Program Settings