Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cre02.g097550 Chlamydomonas reinhardtii HOM05D006532 ORTHO05D008570 1.7e-160 569.3 297 100.0
Pp3c1_5570 Physcomitrium patens HOM05D006532 ORTHO05D008570 5.7e-55 218.8 245 49.0
Mapoly0061s0140 Marchantia polymorpha HOM05D006532 ORTHO05D008570 1.7e-54 217.2 244 48.4
CBR_g34330 Chara braunii HOM05D006532 ORTHO05D008570 1.1e-53 214.5 260 45.4
MCO01G189 Micromonas commoda HOM05D006532 ORTHO05D008570 2.6e-52 209.9 242 46.7
AagrBONN_evm.TU.Sc2ySwM_117.144 Anthoceros agrestis HOM05D006532 ORTHO05D008570 3.5e-52 209.5 248 46.4
SMO134G0241 Selaginella moellendorffii HOM05D006532 ORTHO05D008570 8.5e-51 204.9 247 48.2
SMO139G0131 Selaginella moellendorffii HOM05D006532 ORTHO05D008570 7.2e-50 201.8 248 45.2
SMO145G0084 Selaginella moellendorffii HOM05D006532 ORTHO05D008570 1.6e-49 200.7 248 44.8
TAR383G0022 Trochodendron aralioides HOM05D006532 ORTHO05D008570 3.0e-48 196.4 250 46.0
CDE02G1820 Ceratophyllum demersum HOM05D006532 ORTHO05D008570 1.1e-47 194.5 249 46.2
Ah.10g035030 Amaranthus hybridus HOM05D006532 ORTHO05D008570 4.4e-47 192.6 247 45.3
MSTRG.11698 Avicennia marina HOM05D006532 ORTHO05D008570 5.7e-47 192.2 249 43.8
Sc23g0005260 Simmondsia chinensis HOM05D006532 ORTHO05D008570 1.3e-46 191.0 245 45.3
PRCOL_00005453 Prasinoderma coloniale HOM05D006532 ORTHO05D008570 1.7e-46 190.7 243 42.8
MBI04_g45213_MAGBIO Magnolia biondii HOM05D006532 ORTHO05D008570 2.2e-46 190.3 249 44.6
Sp4g05660 Schrenkiella parvula HOM05D006532 ORTHO05D008570 3.7e-46 189.5 244 45.1
Ciclev10008913m.g Citrus clementina HOM05D006532 ORTHO05D008570 8.2e-46 188.3 249 44.2
Dinv27901 Davidia involucrata HOM05D006532 ORTHO05D008570 1.1e-45 188.0 249 43.0
A04p20040 Brassica napus HOM05D006532 ORTHO05D008570 1.8e-45 187.2 244 44.7
C04p55710 Brassica napus HOM05D006532 ORTHO05D008570 1.8e-45 187.2 244 44.7
BolC4t27098H Brassica oleracea HOM05D006532 ORTHO05D008570 1.8e-45 187.2 244 44.7
Thhalv10002038m.g Eutrema salsugineum HOM05D006532 ORTHO05D008570 1.8e-45 187.2 244 44.7
FAN15G2034 Fragaria x ananassa HOM05D006532 ORTHO05D008570 1.8e-45 187.2 246 44.3
Lj1g0025870 Lotus japonicus HOM05D006532 ORTHO05D008570 1.8e-45 187.2 250 45.2
Aqoxy7G03906 Aquilegia oxysepala HOM05D006532 ORTHO05D008570 2.4e-45 186.8 247 44.5
FvH4_2g35600 Fragaria vesca HOM05D006532 ORTHO05D008570 2.4e-45 186.8 246 44.3
Hund19514 Selenicereus undatus HOM05D006532 ORTHO05D008570 2.4e-45 186.8 236 46.2
HanXRQChr02g0050581 Helianthus annuus HOM05D006532 ORTHO05D008570 3.1e-45 186.4 259 41.3
MD08G1113700 Malus domestica HOM05D006532 ORTHO05D008570 3.1e-45 186.4 264 42.4
Oeu038806.1 Olea europaea HOM05D006532 ORTHO05D008570 3.1e-45 186.4 246 42.7
Prupe.1G448300 Prunus persica HOM05D006532 ORTHO05D008570 3.1e-45 186.4 246 43.5
ECA233G4786 Erigeron canadensis HOM05D006532 ORTHO05D008570 4.1e-45 186.0 258 42.2
FAN27G1267 Fragaria x ananassa HOM05D006532 ORTHO05D008570 4.1e-45 186.0 246 44.3
RcHm_v2.0_Chr6g0306211 Rosa chinensis HOM05D006532 ORTHO05D008570 4.1e-45 186.0 246 43.9
Cc08_g09550 Coffea canephora HOM05D006532 ORTHO05D008570 5.3e-45 185.7 246 43.9
Lsat_1_v5_gn_6_23160 Lactuca sativa HOM05D006532 ORTHO05D008570 5.3e-45 185.7 257 41.2
Cpa.g.c24654.2 Carica papaya HOM05D006532 ORTHO05D008570 7.0e-45 185.3 246 44.7
Glyma.06G085900 Glycine max HOM05D006532 ORTHO05D008570 1.2e-44 184.5 246 43.5
Potri.006G238400 Populus trichocarpa HOM05D006532 ORTHO05D008570 1.2e-44 184.5 249 44.2
CANSAT25G2817 Cannabis sativa HOM05D006532 ORTHO05D008570 1.6e-44 184.1 247 43.3
CAN.G400.2 Capsicum annuum HOM05D006532 ORTHO05D008570 1.6e-44 184.1 247 42.9
Sabra06G0186500 Salix brachista HOM05D006532 ORTHO05D008570 2.0e-44 183.7 249 43.0
THA.LOC104803760 Tarenaya hassleriana HOM05D006532 ORTHO05D008570 2.6e-44 183.3 257 42.8
CSS0019039 Camellia sinensis var. sinensis HOM05D006532 ORTHO05D008570 3.5e-44 183.0 246 42.7
TWI63G0186 Tripterygium wilfordii HOM05D006532 ORTHO05D008570 5.9e-44 182.2 246 43.5
EL10Ac2g04018 Beta vulgaris HOM05D006532 ORTHO05D008570 7.7e-44 181.8 246 42.3
AUR62009283 Chenopodium quinoa HOM05D006532 ORTHO05D008570 7.7e-44 181.8 256 41.4
SMO367G0375 Selaginella moellendorffii HOM05D006532 ORTHO05D008570 7.7e-44 181.8 243 43.6
AL4G17550 Arabidopsis lyrata HOM05D006532 ORTHO05D008570 1.0e-43 181.4 244 43.4
Thecc.09G045200 Theobroma cacao HOM05D006532 ORTHO05D008570 1.0e-43 181.4 246 42.7
Actinidia13336 Actinidia chinensis HOM05D006532 ORTHO05D008570 1.3e-43 181.0 246 42.3
Migut.A00204 Erythranthe guttata HOM05D006532 ORTHO05D008570 1.3e-43 181.0 245 41.6
Sed0025155 Sechium edule HOM05D006532 ORTHO05D008570 1.3e-43 181.0 249 42.6
Manes.16G075600 Manihot esculenta HOM05D006532 ORTHO05D008570 1.7e-43 180.6 246 43.1
Rhsim02G0178300 Rhododendron simsii HOM05D006532 ORTHO05D008570 2.2e-43 180.3 246 42.7
AT2G25830 Arabidopsis thaliana HOM05D006532 ORTHO05D008570 2.9e-43 179.9 244 43.4
CsaV3_2G030860 Cucumis sativus L. HOM05D006532 ORTHO05D008570 2.9e-43 179.9 249 42.6
Gohir.D05G048600 Gossypium hirsutum HOM05D006532 ORTHO05D008570 2.9e-43 179.9 246 42.3
Carub.0004s0565 Capsella rubella HOM05D006532 ORTHO05D008570 3.8e-43 179.5 244 43.4
Gorai.009G049900 Gossypium raimondii HOM05D006532 ORTHO05D008570 3.8e-43 179.5 246 42.3
TPR.G15104 Trifolium pratense HOM05D006532 ORTHO05D008570 3.8e-43 179.5 249 43.0
GSVIVG01035625001 Vitis vinifera HOM05D006532 ORTHO05D008570 3.8e-43 179.5 247 41.7
Solyc08g066640.3 Solanum lycopersicum HOM05D006532 ORTHO05D008570 5.0e-43 179.1 258 40.7
Sopen08g020510 Solanum pennellii HOM05D006532 ORTHO05D008570 5.0e-43 179.1 257 40.1
PGSC0003DMG402002229 Solanum tuberosum HOM05D006532 ORTHO05D008570 5.0e-43 179.1 257 40.1
ATR0705G133 Amborella trichopoda HOM05D006532 ORTHO05D008570 6.5e-43 178.7 246 44.3
Hma1.2p1_1138F.1_g260800 Hydrangea macrophylla HOM05D006532 ORTHO05D008570 1.1e-42 177.9 247 42.5
Nitab4.5_0003794g0050 Nicotiana tabacum HOM05D006532 ORTHO05D008570 1.1e-42 177.9 248 41.5
PGR031G1209 Punica granatum HOM05D006532 ORTHO05D008570 1.5e-42 177.6 270 42.6
Phvul.009G109800 Phaseolus vulgaris HOM05D006532 ORTHO05D008570 1.9e-42 177.2 249 43.4
SGA_v2.0_scaffold75G25009 Striga asiatica HOM05D006532 ORTHO05D008570 3.2e-42 176.4 245 40.0
Atru.chr7.2089 Acer truncatum HOM05D006532 ORTHO05D008570 7.2e-42 175.3 244 43.0
Lalb_Chr08g0243051 Lupinus albus HOM05D006532 ORTHO05D008570 7.2e-42 175.3 246 42.7
CiPaw.07G204300 Carya illinoinensis HOM05D006532 ORTHO05D008570 1.2e-41 174.5 249 42.6
QL12p041387 Quercus lobata HOM05D006532 ORTHO05D008570 1.6e-41 174.1 246 41.5
Ca_15592_v3 Cicer arietinum L. HOM05D006532 ORTHO05D008570 2.1e-41 173.7 249 42.6
MELO3C011141.2 Cucumis melo HOM05D006532 ORTHO05D008570 2.7e-41 173.3 249 41.0
CARHR115400 Cardamine hirsuta HOM05D006532 ORTHO05D008570 3.6e-41 172.9 257 42.0
COL.COLO4_20970 Corchorus olitorius HOM05D006532 ORTHO05D008570 3.6e-41 172.9 246 41.5
SalBow4G2374 Salvia bowleyana HOM05D006532 ORTHO05D008570 3.6e-41 172.9 246 40.2
VMungo1309G2674 Vigna mungo HOM05D006532 ORTHO05D008570 3.6e-41 172.9 249 41.8
Peaxi162Scf00227g00717 Petunia axillaris HOM05D006532 ORTHO05D008570 4.7e-41 172.6 248 40.7
Lj8A581T27 Lonicera japonica HOM05D006532 ORTHO05D008570 6.1e-41 172.2 236 40.7
arahy.Tifrunner.gnm1.ann1.WYW67Z Arachis hypogaea HOM05D006532 ORTHO05D008570 1.0e-40 171.4 285 39.3
unitig_748.g7511 Utricularia gibba HOM05D006532 ORTHO05D008570 1.4e-40 171.0 231 41.1
Aa31LG5G9920 Aethionema arabicum HOM05D006532 ORTHO05D008570 3.0e-40 169.9 263 40.3
Cfa013365 Carpinus fangiana HOM05D006532 ORTHO05D008570 4.0e-40 169.5 249 41.8
TWI63G1016 Tripterygium wilfordii HOM05D006532 ORTHO05D008570 4.0e-40 169.5 249 41.8
Nn8g39129 Nelumbo nucifera HOM05D006532 ORTHO05D008570 5.2e-40 169.1 233 43.3
DCAR_004469 Daucus carota HOM05D006532 ORTHO05D008570 6.8e-40 168.7 289 37.7
vmacro11058 Vaccinium macrocarpon HOM05D006532 ORTHO05D008570 8.8e-40 168.3 269 38.7
Eucgr.C00591 Eucalyptus grandis HOM05D006532 ORTHO05D008570 2.0e-39 167.2 249 41.0
Zm00001eb293770 Zea mays HOM05D006532 ORTHO05D008570 2.6e-39 166.8 247 41.3
HPP92_022975 Vanilla planifolia HOM05D006532 ORTHO05D008570 9.7e-39 164.9 255 39.2
PSO210G1609 Papaver somniferum HOM05D006532 ORTHO05D008570 1.3e-38 164.5 212 43.9
Os05g0519800 Oryza sativa ssp. japonica HOM05D006532 ORTHO05D008570 6.3e-38 162.2 255 38.8
Medtr3g109620 Medicago truncatula HOM05D006532 ORTHO05D008570 1.1e-37 161.4 271 38.4
FAN20G1106 Fragaria x ananassa HOM05D006532 ORTHO05D008570 2.4e-37 160.2 247 40.9
ClCG08G012230 Citrullus lanatus HOM05D006532 ORTHO05D008570 4.1e-37 159.5 299 34.8
arahy.Tifrunner.gnm1.ann1.W7W61Q Arachis hypogaea HOM05D006532 ORTHO05D008570 5.3e-37 159.1 318 35.2
Hund03396 Selenicereus undatus HOM05D006532 ORTHO05D008570 2.2e-35 153.7 210 43.3
Nitab4.5_0001894g0020 Nicotiana tabacum HOM05D006532 ORTHO05D008570 3.8e-35 152.9 224 39.3
SEGI_00611 Sequoiadendron giganteum HOM05D006532 ORTHO05D008570 5.0e-35 152.5 213 41.8
Duzib168G2121 Durio zibethinus HOM05D006532 ORTHO05D008570 1.2e-33 147.9 169 47.9
Hma1.2p1_1753F.1_g300870 Hydrangea macrophylla HOM05D006532 ORTHO05D008570 4.0e-32 142.9 172 44.8
Psat0s1928g0160 Pisum sativum HOM05D006532 ORTHO05D008570 1.2e-31 141.4 171 45.6
Glyma.04G084200 Glycine max HOM05D006532 ORTHO05D008570 7.5e-31 138.7 199 40.7
AUR62039700 Chenopodium quinoa HOM05D006532 ORTHO05D008570 2.2e-30 137.1 196 41.8
Eucgr.C00548 Eucalyptus grandis HOM05D006532 ORTHO05D008570 2.8e-30 136.7 169 45.0
Ca_28981_v3 Cicer arietinum L. HOM05D006532 ORTHO05D008570 7.7e-28 128.6 245 33.5
Ca_28852_v3 Cicer arietinum L. HOM05D006532 ORTHO05D148468 1.2e-25 121.3 233 32.6
Haze_21888 Corylus avellana HOM05D006532 ORTHO05D008570 4.5e-20 102.8 152 40.8
Gohir.A05G046766 Gossypium hirsutum HOM05D006532 ORTHO05D008570 1.1e-18 98.2 90 53.3
Gohir.A05G046832 Gossypium hirsutum HOM05D006532 ORTHO05D008570 2.5e-10 70.5 127 37.8
SGA_v2.0_scaffold88G27190 Striga asiatica HOM05D006532 ORTHO05D008570 2.1e-09 67.4 127 33.9


User provided reference genes

Program Settings