Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cre02.g094300 Chlamydomonas reinhardtii HOM05D006266 ORTHO05D008016 0.0e+00 1140.6 550 100.0
Aa31LG1G25150 Aethionema arabicum HOM05D006266 ORTHO05D008016 2.0e-194 682.9 550 59.6
Migut.G01347 Erythranthe guttata HOM05D006266 ORTHO05D008016 4.4e-194 681.8 550 59.6
GSVIVG01010835001 Vitis vinifera HOM05D006266 ORTHO05D008016 1.3e-193 680.2 550 59.8
PSO675G5931 Papaver somniferum HOM05D006266 ORTHO05D008016 4.9e-193 678.3 550 59.6
Pp3c26_13090 Physcomitrium patens HOM05D006266 ORTHO05D008016 4.9e-193 678.3 550 59.8
Sc19g0002870 Simmondsia chinensis HOM05D006266 ORTHO05D008016 3.1e-192 675.6 550 59.1
TAR362G0699 Trochodendron aralioides HOM05D006266 ORTHO05D008016 5.4e-192 674.9 548 59.3
C04p04440 Brassica napus HOM05D006266 ORTHO05D008016 9.2e-192 674.1 550 58.5
BolC4t22077H Brassica oleracea HOM05D006266 ORTHO05D008016 9.2e-192 674.1 550 58.5
CiPaw.02G052400 Carya illinoinensis HOM05D006266 ORTHO05D008016 1.6e-191 673.3 550 58.5
BraA05t19361Z Brassica rapa HOM05D006266 ORTHO05D008016 2.0e-191 672.9 550 58.9
MSTRG.4284 Avicennia marina HOM05D006266 ORTHO05D008016 5.9e-191 671.4 550 58.5
A05p03740 Brassica napus HOM05D006266 ORTHO05D008016 7.8e-191 671.0 550 58.7
Ciclev10019615m.g Citrus clementina HOM05D006266 ORTHO05D008016 7.8e-191 671.0 550 58.4
HanXRQChr01g0023481 Helianthus annuus HOM05D006266 ORTHO05D008016 7.8e-191 671.0 550 58.9
TPR.G18865 Trifolium pratense HOM05D006266 ORTHO05D008016 7.8e-191 671.0 550 57.3
Aqoxy2G04160 Aquilegia oxysepala HOM05D006266 ORTHO05D008016 1.7e-190 669.8 550 57.6
Dinv44175 Davidia involucrata HOM05D006266 ORTHO05D008016 2.9e-190 669.1 550 59.1
Thhalv10001353m.g Eutrema salsugineum HOM05D006266 ORTHO05D008016 2.9e-190 669.1 550 58.7
Psat5g289640 Pisum sativum HOM05D006266 ORTHO05D008016 2.9e-190 669.1 550 57.6
Hund12414 Selenicereus undatus HOM05D006266 ORTHO05D008016 2.9e-190 669.1 579 56.8
Atru.chr4.1256 Acer truncatum HOM05D006266 ORTHO05D008016 5.0e-190 668.3 550 58.5
AL4G42140 Arabidopsis lyrata HOM05D006266 ORTHO05D008016 5.0e-190 668.3 550 58.5
Carub.0004s2587 Capsella rubella HOM05D006266 ORTHO05D008016 6.6e-190 667.9 550 58.7
THA.LOC104805138 Tarenaya hassleriana HOM05D006266 ORTHO05D008016 6.6e-190 667.9 547 58.1
ATR0743G015 Amborella trichopoda HOM05D006266 ORTHO05D008016 8.6e-190 667.5 550 59.1
BcaC02g12401 Brassica carinata HOM05D006266 ORTHO05D008016 1.5e-189 666.8 550 58.7
Sabra17G0016500 Salix brachista HOM05D006266 ORTHO05D008016 1.5e-189 666.8 550 57.3
AT2G43400 Arabidopsis thaliana HOM05D006266 ORTHO05D008016 2.5e-189 666.0 550 58.5
CANSAT78G1968 Cannabis sativa HOM05D006266 ORTHO05D008016 2.5e-189 666.0 550 58.0
Nn7g37595 Nelumbo nucifera HOM05D006266 ORTHO05D008016 2.5e-189 666.0 550 58.0
Potri.017G027500 Populus trichocarpa HOM05D006266 ORTHO05D008016 2.5e-189 666.0 550 57.8
Sopen12g011050 Solanum pennellii HOM05D006266 ORTHO05D008016 2.5e-189 666.0 550 59.1
CARHR138470 Cardamine hirsuta HOM05D006266 ORTHO05D008016 3.3e-189 665.6 550 58.4
SMO141G0282 Selaginella moellendorffii HOM05D006266 ORTHO05D008016 7.3e-189 664.5 551 59.2
Prupe.1G197500 Prunus persica HOM05D006266 ORTHO05D008016 1.2e-188 663.7 550 57.3
Glyma.15G029200 Glycine max HOM05D006266 ORTHO05D008016 2.1e-188 662.9 550 56.5
Lj3g0007796 Lotus japonicus HOM05D006266 ORTHO05D008016 2.1e-188 662.9 550 56.7
Solyc12g021170.2 Solanum lycopersicum HOM05D006266 ORTHO05D008016 3.6e-188 662.1 550 58.7
Manes.11G123500 Manihot esculenta HOM05D006266 ORTHO05D008016 4.7e-188 661.8 550 57.3
Ca_01251_v3 Cicer arietinum L. HOM05D006266 ORTHO05D008016 6.1e-188 661.4 550 57.5
Sp4g25480 Schrenkiella parvula HOM05D006266 ORTHO05D008016 8.0e-188 661.0 550 57.8
Phvul.005G153800 Phaseolus vulgaris HOM05D006266 ORTHO05D008016 1.0e-187 660.6 550 56.4
HPP92_022167 Vanilla planifolia HOM05D006266 ORTHO05D008016 1.0e-187 660.6 550 58.2
FvH4_4g10960 Fragaria vesca HOM05D006266 ORTHO05D008016 1.4e-187 660.2 550 57.1
arahy.Tifrunner.gnm1.ann1.JU07H9 Arachis hypogaea HOM05D006266 ORTHO05D008016 2.3e-187 659.4 550 57.3
arahy.Tifrunner.gnm1.ann1.D6UD48 Arachis hypogaea HOM05D006266 ORTHO05D008016 3.0e-187 659.1 550 57.1
Lalb_Chr14g0372511 Lupinus albus HOM05D006266 ORTHO05D008016 1.5e-186 656.8 550 57.3
Sed0000993 Sechium edule HOM05D006266 ORTHO05D008016 2.0e-186 656.4 550 56.9
SGA_v2.0_scaffold17G08154 Striga asiatica HOM05D006266 ORTHO05D008016 2.0e-186 656.4 606 54.1
Duzib151G0889 Durio zibethinus HOM05D006266 ORTHO05D008016 3.4e-186 655.6 550 57.1
Gohir.A10G139200 Gossypium hirsutum HOM05D006266 ORTHO05D008016 3.4e-186 655.6 548 57.5
Gorai.011G140700 Gossypium raimondii HOM05D006266 ORTHO05D008016 5.8e-186 654.8 548 57.3
Lsat_1_v5_gn_1_77821 Lactuca sativa HOM05D006266 ORTHO05D008016 5.8e-186 654.8 549 57.4
PGR142G3304 Punica granatum HOM05D006266 ORTHO05D008016 7.5e-186 654.4 576 56.1
MBI07_g02893_MAGBIO Magnolia biondii HOM05D006266 ORTHO05D008016 1.7e-185 653.3 550 57.3
Thecc.04G175700 Theobroma cacao HOM05D006266 ORTHO05D008016 2.2e-185 652.9 550 56.5
Eucgr.H00345 Eucalyptus grandis HOM05D006266 ORTHO05D008016 2.9e-185 652.5 550 56.5
Gohir.D10G127600 Gossypium hirsutum HOM05D006266 ORTHO05D008016 3.7e-185 652.1 548 56.9
RcHm_v2.0_Chr4g0406421 Rosa chinensis HOM05D006266 ORTHO05D008016 3.7e-185 652.1 595 53.1
Nitab4.5_0001990g0030 Nicotiana tabacum HOM05D006266 ORTHO05D008016 6.4e-185 651.4 550 58.0
Cfa015189 Carpinus fangiana HOM05D006266 ORTHO05D008016 1.1e-184 650.6 550 57.5
CDE09G1029 Ceratophyllum demersum HOM05D006266 ORTHO05D008016 1.1e-184 650.6 558 57.3
QL10p050722 Quercus lobata HOM05D006266 ORTHO05D008016 1.1e-184 650.6 573 55.1
VMungo1080G0961 Vigna mungo HOM05D006266 ORTHO05D008016 1.6e-183 646.7 571 54.5
Nitab4.5_0000505g0020 Nicotiana tabacum HOM05D006266 ORTHO05D008016 3.5e-183 645.6 547 57.2
ClCG05G007190 Citrullus lanatus HOM05D006266 ORTHO05D008016 3.9e-182 642.1 589 53.5
Oeu024477.1 Olea europaea HOM05D006266 ORTHO05D008016 1.1e-181 640.6 612 52.3
ECA248G0977 Erigeron canadensis HOM05D006266 ORTHO05D008016 9.5e-181 637.5 520 58.5
PRCOL_00003135 Prasinoderma coloniale HOM05D006266 ORTHO05D008016 1.1e-179 634.0 588 56.3
vmacro00635 Vaccinium macrocarpon HOM05D006266 ORTHO05D008016 8.9e-179 630.9 610 52.0
FAN17G0658 Fragaria x ananassa HOM05D006266 ORTHO05D008016 1.2e-178 630.6 550 55.8
Actinidia27081 Actinidia chinensis HOM05D006266 ORTHO05D008016 4.9e-177 625.2 550 56.2
MD04G1042900 Malus domestica HOM05D006266 ORTHO05D008016 4.6e-175 618.6 550 55.1
CsaV3_3G015950 Cucumis sativus L. HOM05D006266 ORTHO05D008016 1.3e-174 617.1 522 56.9
DCAR_028531 Daucus carota HOM05D006266 ORTHO05D008016 1.1e-173 614.0 553 55.0
PSO017G5469 Papaver somniferum HOM05D006266 ORTHO05D008016 2.6e-170 602.8 550 55.5
Peaxi162Scf00184g00418 Petunia axillaris HOM05D006266 ORTHO05D008016 3.4e-170 602.4 550 54.5
CAN.G51.9 Capsicum annuum HOM05D006266 ORTHO05D008016 1.7e-169 600.1 550 53.8
AagrBONN_evm.TU.Sc2ySwM_117.3933 Anthoceros agrestis HOM05D006266 ORTHO05D008016 5.4e-168 595.1 502 59.2
Medtr2g099040 Medicago truncatula HOM05D006266 ORTHO05D008016 7.3e-165 584.7 500 55.8
Cpa.g.sc9.312 Carica papaya HOM05D006266 ORTHO05D008016 9.5e-165 584.3 550 53.8
Dinv44151 Davidia involucrata HOM05D006266 ORTHO05D008016 2.4e-163 579.7 479 58.5
Hma1.2p1_0324F.1_g125550 Hydrangea macrophylla HOM05D006266 ORTHO05D008016 1.2e-162 577.4 478 56.7
Rhsim09G0023000 Rhododendron simsii HOM05D006266 ORTHO05D008016 5.1e-158 562.0 760 42.1
Hma1.2p1_0324F.1_g125560 Hydrangea macrophylla HOM05D006266 ORTHO05D008016 9.6e-157 557.8 440 58.2
Haze_26227 Corylus avellana HOM05D006266 ORTHO05D008016 2.4e-155 553.1 558 50.0
Lj3C32G4 Lonicera japonica HOM05D006266 ORTHO05D008016 9.9e-154 547.7 550 51.1
Haze_01464 Corylus avellana HOM05D006266 ORTHO05D008016 2.2e-153 546.6 710 43.5
Lj3C1G0 Lonicera japonica HOM05D006266 ORTHO05D008016 2.9e-153 546.2 550 50.9
Cfa026422 Carpinus fangiana HOM05D006266 ORTHO05D008016 3.2e-152 542.7 534 50.9
AUR62023848 Chenopodium quinoa HOM05D006266 ORTHO05D008016 2.3e-150 536.6 552 49.1
Mapoly0012s0124 Marchantia polymorpha HOM05D006266 ORTHO05D008016 8.7e-142 508.1 427 58.5
Haze_26951 Corylus avellana HOM05D006266 ORTHO05D008016 7.4e-141 505.0 560 46.6
Cc03_g11970 Coffea canephora HOM05D006266 ORTHO05D008016 8.4e-137 491.5 376 60.9
MELO3C006793.2 Cucumis melo HOM05D006266 ORTHO05D008016 3.7e-132 476.1 457 51.2
AUR62002342 Chenopodium quinoa HOM05D006266 ORTHO05D008016 1.2e-119 434.5 447 47.4
Zm00001eb043590 Zea mays HOM05D006266 ORTHO05D008016 3.6e-111 406.4 351 57.3
Ah.07g202330 Amaranthus hybridus HOM05D006266 ORTHO05D008016 2.0e-90 337.4 341 53.1
unitig_52.g17681 Utricularia gibba HOM05D006266 ORTHO05D008016 1.5e-80 304.7 429 41.5
SEGI_14637 Sequoiadendron giganteum HOM05D006266 ORTHO05D008016 5.2e-78 296.2 263 58.2
Ah.07g202340 Amaranthus hybridus HOM05D006266 ORTHO05D008016 1.2e-66 258.5 209 56.9
Eucgr.L02537 Eucalyptus grandis HOM05D006266 ORTHO05D008016 6.8e-62 242.7 214 52.8
PGSC0003DMG400014944 Solanum tuberosum HOM05D006266 ORTHO05D008016 8.6e-49 199.1 188 52.1
Cc03_g11980 Coffea canephora HOM05D006266 ORTHO05D008016 2.5e-48 197.6 179 58.1
Sopen02g004370 Solanum pennellii HOM05D006266 ORTHO05D008016 4.4e-45 186.8 175 56.6
EL10Ac3g06005 Beta vulgaris HOM05D006266 ORTHO05D008016 9.9e-45 185.7 173 58.4
FAN12G3251 Fragaria x ananassa HOM05D006266 ORTHO05D008016 2.9e-44 184.1 173 53.8
CSS0026769 Camellia sinensis var. sinensis HOM05D006266 ORTHO05D008016 4.0e-38 163.7 115 65.2
SEGI_11902 Sequoiadendron giganteum HOM05D006266 ORTHO05D008016 3.5e-34 150.6 160 52.5
Os10g0516300 Oryza sativa ssp. japonica HOM05D006266 ORTHO05D008016 2.1e-26 124.8 122 51.6
SEGI_08796 Sequoiadendron giganteum HOM05D006266 ORTHO05D008016 1.8e-25 121.7 80 65.0
CSS0001057 Camellia sinensis var. sinensis HOM05D006266 ORTHO05D008016 1.1e-24 119.0 127 49.6
CSS0016449 Camellia sinensis var. sinensis HOM05D006266 ORTHO05D008016 1.1e-22 112.5 109 56.9
CSS0026763 Camellia sinensis var. sinensis HOM05D006266 ORTHO05D008016 1.1e-22 112.5 128 46.9
MELO3C006791.2 Cucumis melo HOM05D005231 ORTHO05D006387 1.0e-20 105.9 68 73.5
SEGI_29623 Sequoiadendron giganteum HOM05D006266 ORTHO05D008016 2.9e-20 104.4 67 73.1
CSS0001558 Camellia sinensis var. sinensis HOM05D006266 ORTHO05D008016 1.1e-16 92.4 112 44.6
CSS0004821 Camellia sinensis var. sinensis HOM05D006266 ORTHO05D008016 1.1e-16 92.4 112 44.6
CSS0016187 Camellia sinensis var. sinensis HOM05D006266 ORTHO05D008016 4.0e-14 84.0 82 56.1
arahy.Tifrunner.gnm1.ann1.QA6FBH Arachis hypogaea HOM05D006266 ORTHO05D008016 5.7e-08 63.5 42 76.2
CSS0019028 Camellia sinensis var. sinensis HOM05D006266 ORTHO05D024694 2.2e-07 61.6 44 61.4
CSS0008442 Camellia sinensis var. sinensis HOM05D006266 ORTHO05D024694 6.3e-07 60.1 44 59.1
CSS0022444 Camellia sinensis var. sinensis HOM05D006266 ORTHO05D024694 6.3e-07 60.1 44 59.1
Lsat_1_v5_gn_7_84681 Lactuca sativa HOM05D006266 ORTHO05D004407 9.0e-06 56.2 56 46.4


User provided reference genes

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