Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cre02.g093300 Chlamydomonas reinhardtii HOM05D004787 ORTHO05D006972 0.0e+00 1288.5 679 100.0
Mapoly0108s0041 Marchantia polymorpha HOM05D004787 ORTHO05D006972 1.5e-115 421.4 515 46.6
PGR004G1381 Punica granatum HOM05D004787 ORTHO05D006972 4.3e-115 419.9 509 46.8
CDE05G1440 Ceratophyllum demersum HOM05D004787 ORTHO05D006972 1.3e-114 418.3 511 45.8
Ciclev10011482m.g Citrus clementina HOM05D004787 ORTHO05D006972 6.2e-114 416.0 510 46.5
Duzib138G0253 Durio zibethinus HOM05D004787 ORTHO05D006972 1.4e-113 414.8 509 45.6
Manes.02G082200 Manihot esculenta HOM05D004787 ORTHO05D006972 5.3e-113 412.9 504 45.4
Hma1.2p1_0034F.1_g021480 Hydrangea macrophylla HOM05D004787 ORTHO05D006972 9.0e-113 412.1 524 44.7
Thecc.04G058600 Theobroma cacao HOM05D004787 ORTHO05D006972 3.4e-112 410.2 497 45.9
THA.LOC104820926 Tarenaya hassleriana HOM05D004787 ORTHO05D006972 2.2e-111 407.5 505 45.7
Gohir.A12G052700 Gossypium hirsutum HOM05D004787 ORTHO05D006972 1.1e-110 405.2 508 44.7
Gorai.008G054500 Gossypium raimondii HOM05D004787 ORTHO05D006972 1.1e-110 405.2 508 44.7
RcHm_v2.0_Chr3g0487991 Rosa chinensis HOM05D004787 ORTHO05D006972 1.1e-110 405.2 499 45.3
FvH4_1g27560 Fragaria vesca HOM05D004787 ORTHO05D006972 1.9e-110 404.4 507 44.4
MD11G1181900 Malus domestica HOM05D004787 ORTHO05D006972 1.9e-110 404.4 508 44.7
Eucgr.F02919 Eucalyptus grandis HOM05D004787 ORTHO05D006972 2.5e-110 404.1 498 44.8
Gohir.D12G051200 Gossypium hirsutum HOM05D004787 ORTHO05D006972 2.5e-110 404.1 508 44.5
Cfa008000 Carpinus fangiana HOM05D004787 ORTHO05D006972 4.2e-110 403.3 503 45.9
Thhalv10020476m.g Eutrema salsugineum HOM05D004787 ORTHO05D006972 4.2e-110 403.3 511 44.2
CSS0018052 Camellia sinensis var. sinensis HOM05D004787 ORTHO05D006972 5.5e-110 402.9 507 46.0
Nn4g24844 Nelumbo nucifera HOM05D004787 ORTHO05D006972 7.1e-110 402.5 528 44.5
CBR_g66787 Chara braunii HOM05D004787 ORTHO05D006972 9.3e-110 402.1 516 45.5
AT3G02710 Arabidopsis thaliana HOM05D004787 ORTHO05D006972 1.2e-109 401.7 522 44.4
Migut.K00983 Erythranthe guttata HOM05D004787 ORTHO05D006972 1.2e-109 401.7 515 45.4
Ca_15115_v3 Cicer arietinum L. HOM05D004787 ORTHO05D006972 1.6e-109 401.4 505 45.5
Psat5g143840 Pisum sativum HOM05D004787 ORTHO05D006972 1.6e-109 401.4 505 45.5
Potri.004G076600 Populus trichocarpa HOM05D004787 ORTHO05D006972 1.6e-109 401.4 523 43.6
MSTRG.15622 Avicennia marina HOM05D004787 ORTHO05D006972 2.1e-109 401.0 514 44.0
Pp3c23_13180 Physcomitrium patens HOM05D004787 ORTHO05D006972 2.1e-109 401.0 550 43.3
Pp3c23_13183 Physcomitrium patens HOM05D004787 ORTHO05D006972 2.1e-109 401.0 550 43.3
Glyma.18G045800 Glycine max HOM05D004787 ORTHO05D006972 2.7e-109 400.6 511 44.4
Lalb_Chr18g0053891 Lupinus albus HOM05D004787 ORTHO05D006972 2.7e-109 400.6 493 45.8
Lsat_1_v5_gn_3_69520 Lactuca sativa HOM05D004787 ORTHO05D006972 3.5e-109 400.2 510 43.7
TPR.G37333 Trifolium pratense HOM05D004787 ORTHO05D006972 3.5e-109 400.2 505 45.3
Hund06861 Selenicereus undatus HOM05D004787 ORTHO05D006972 6.0e-109 399.4 523 45.1
Atru.chr1.1965 Acer truncatum HOM05D004787 ORTHO05D006972 7.9e-109 399.1 506 43.9
Aqoxy3G04198 Aquilegia oxysepala HOM05D004787 ORTHO05D006972 7.9e-109 399.1 508 45.1
TAR629G0710 Trochodendron aralioides HOM05D004787 ORTHO05D006972 7.9e-109 399.1 493 45.4
SEGI_38823 Sequoiadendron giganteum HOM05D004787 ORTHO05D006972 1.8e-108 397.9 518 44.2
AL3G12100 Arabidopsis lyrata HOM05D004787 ORTHO05D006972 2.3e-108 397.5 507 44.4
Medtr3g064180 Medicago truncatula HOM05D004787 ORTHO05D006972 2.3e-108 397.5 509 45.0
BNapus_Darmor_BZH_scaffold_99p00220 Brassica napus HOM05D004787 ORTHO05D006972 3.9e-108 396.7 512 44.1
Phvul.006G085100 Phaseolus vulgaris HOM05D004787 ORTHO05D006972 5.1e-108 396.4 509 44.6
QL02p054528 Quercus lobata HOM05D004787 ORTHO05D006972 6.7e-108 396.0 545 43.9
TWI53G0480 Tripterygium wilfordii HOM05D004787 ORTHO05D006972 6.7e-108 396.0 498 44.8
Carub.0003s0181 Capsella rubella HOM05D004787 ORTHO05D006972 8.7e-108 395.6 507 44.0
Prupe.3G013000 Prunus persica HOM05D004787 ORTHO05D006972 1.5e-107 394.8 509 43.8
Solyc02g081410.3 Solanum lycopersicum HOM05D004787 ORTHO05D006972 1.5e-107 394.8 506 45.3
SGA_v2.0_scaffold45G17100 Striga asiatica HOM05D004787 ORTHO05D006972 1.5e-107 394.8 524 43.5
Sp3g01740 Schrenkiella parvula HOM05D004787 ORTHO05D006972 1.9e-107 394.4 507 44.0
PSO063G5381 Papaver somniferum HOM05D004787 ORTHO05D006972 2.5e-107 394.0 508 43.5
Sopen02g026040 Solanum pennellii HOM05D004787 ORTHO05D006972 3.3e-107 393.7 506 45.3
PGSC0003DMG400019729 Solanum tuberosum HOM05D004787 ORTHO05D006972 3.3e-107 393.7 506 45.3
CiPaw.03G008000 Carya illinoinensis HOM05D004787 ORTHO05D006972 7.4e-107 392.5 497 45.5
Dinv28256 Davidia involucrata HOM05D004787 ORTHO05D006972 9.6e-107 392.1 497 44.9
PSO782G3524 Papaver somniferum HOM05D004787 ORTHO05D006972 9.6e-107 392.1 509 43.0
BraA01t04622Z Brassica rapa HOM05D004787 ORTHO05D006972 1.3e-106 391.7 528 43.2
Aa31LG5G13180 Aethionema arabicum HOM05D004787 ORTHO05D006972 1.6e-106 391.3 534 43.6
Lj6g0012338 Lotus japonicus HOM05D004787 ORTHO05D006972 1.6e-106 391.3 529 42.2
AagrBONN_evm.TU.Sc2ySwM_228.1941__1942 Anthoceros agrestis HOM05D004787 ORTHO05D006972 2.1e-106 391.0 470 46.8
arahy.Tifrunner.gnm1.ann1.QP3PIR Arachis hypogaea HOM05D004787 ORTHO05D006972 2.1e-106 391.0 517 42.9
BolC1t05882H Brassica oleracea HOM05D004787 ORTHO05D006972 2.8e-106 390.6 521 43.2
CARHR076710 Cardamine hirsuta HOM05D004787 ORTHO05D006972 2.8e-106 390.6 527 43.5
FAN28G1537 Fragaria x ananassa HOM05D004787 ORTHO05D006972 2.8e-106 390.6 521 43.0
arahy.Tifrunner.gnm1.ann1.0Y5IZW Arachis hypogaea HOM05D004787 ORTHO05D006972 1.1e-105 388.7 517 43.3
SMO276G0035 Selaginella moellendorffii HOM05D004787 ORTHO05D006972 1.4e-105 388.3 475 46.3
FAN19G0382 Fragaria x ananassa HOM05D004787 ORTHO05D006972 3.1e-105 387.1 507 43.4
ECA246G0632 Erigeron canadensis HOM05D004787 ORTHO05D006972 6.9e-105 386.0 520 43.1
Sabra04G0050800 Salix brachista HOM05D004787 ORTHO05D006972 9.0e-105 385.6 525 43.0
MELO3C025106.2 Cucumis melo HOM05D004787 ORTHO05D006972 1.2e-104 385.2 507 43.8
DCAR_003396 Daucus carota HOM05D004787 ORTHO05D006972 2.6e-104 384.0 525 43.4
HanXRQChr16g0532401 Helianthus annuus HOM05D004787 ORTHO05D006972 5.9e-104 382.9 509 43.4
CsaV3_5G024370 Cucumis sativus L. HOM05D004787 ORTHO05D006972 1.3e-103 381.7 507 43.2
FAN26G3076 Fragaria x ananassa HOM05D004787 ORTHO05D006972 3.8e-103 380.2 508 43.5
Lj4C250G12 Lonicera japonica HOM05D004787 ORTHO05D006972 3.8e-103 380.2 520 42.7
Peaxi162Scf00344g02023 Petunia axillaris HOM05D004787 ORTHO05D006972 3.8e-103 380.2 506 44.5
FAN28G1012 Fragaria x ananassa HOM05D004787 ORTHO05D006972 6.5e-103 379.4 508 43.5
ClCG01G008420 Citrullus lanatus HOM05D004787 ORTHO05D006972 8.4e-103 379.0 501 43.3
Haze_14069 Corylus avellana HOM05D004787 ORTHO05D006972 1.4e-102 378.3 515 43.9
Os02g0831300 Oryza sativa ssp. japonica HOM05D004787 ORTHO05D006972 3.2e-102 377.1 494 43.3
CANSAT35G0608 Cannabis sativa HOM05D004787 ORTHO05D006972 6.1e-101 372.9 516 42.4
AUR62037503 Chenopodium quinoa HOM05D004787 ORTHO05D006972 1.0e-100 372.1 497 42.9
vmacro20447 Vaccinium macrocarpon HOM05D004787 ORTHO05D006972 1.3e-100 371.7 590 40.5
MBI06_g02537_MAGBIO Magnolia biondii HOM05D004787 ORTHO05D006972 2.3e-100 370.9 528 41.1
VMungo0540G0637 Vigna mungo HOM05D004787 ORTHO05D006972 2.3e-100 370.9 509 42.4
Ah.04g162910 Amaranthus hybridus HOM05D004787 ORTHO05D006972 3.0e-100 370.5 504 43.1
EL10Ac4g08906 Beta vulgaris HOM05D004787 ORTHO05D006972 3.0e-100 370.5 497 43.7
Zm00001eb259490 Zea mays HOM05D004787 ORTHO05D006972 8.7e-100 369.0 512 42.2
ATR0618G058 Amborella trichopoda HOM05D004787 ORTHO05D006972 1.3e-98 365.2 475 44.0
MCO05G673 Micromonas commoda HOM05D004787 ORTHO05D006972 1.3e-98 365.2 530 44.0
unitig_32.g10735 Utricularia gibba HOM05D004787 ORTHO05D006972 1.1e-97 362.1 569 39.5
Rhsim07G0211400 Rhododendron simsii HOM05D004787 ORTHO05D006972 3.1e-97 360.5 504 42.7
Nitab4.5_0003412g0040 Nicotiana tabacum HOM05D004787 ORTHO05D006972 2.0e-96 357.8 440 47.5
Hma1.2p1_0034F.1_g021490 Hydrangea macrophylla HOM05D004787 ORTHO05D006972 7.7e-96 355.9 424 47.4
Sed0001995 Sechium edule HOM05D004787 ORTHO05D006972 1.0e-95 355.5 450 45.8
Actinidia40400 Actinidia chinensis HOM05D004787 ORTHO05D006972 1.7e-95 354.8 506 42.1
COL.COLO4_06952 Corchorus olitorius HOM05D004787 ORTHO05D006972 2.7e-93 347.4 436 45.0
SalBow5G5112 Salvia bowleyana HOM05D004787 ORTHO05D006972 4.6e-93 346.7 507 41.2
Nitab4.5_0000483g0190 Nicotiana tabacum HOM05D004787 ORTHO05D006972 1.7e-90 338.2 439 46.7
AUR62004748 Chenopodium quinoa HOM05D004787 ORTHO05D006972 7.7e-88 329.3 497 40.2
PRCOL_00000524 Prasinoderma coloniale HOM05D004787 ORTHO05D006972 1.4e-86 325.1 496 40.7
HPP92_022084 Vanilla planifolia HOM05D004787 ORTHO05D006972 1.4e-84 318.5 372 45.7
Oeu022144.1 Olea europaea HOM05D004787 ORTHO05D006972 2.0e-83 314.7 362 45.9
Cpa.g.sc108.2 Carica papaya HOM05D004787 ORTHO05D006972 4.8e-82 310.1 339 48.4
CAN.G809.96 Capsicum annuum HOM05D004787 ORTHO05D006972 2.4e-81 307.8 328 49.4
Sc09g0004590 Simmondsia chinensis HOM05D004787 ORTHO05D006972 4.5e-80 303.5 433 43.2
BNapus_Darmor_BZH_scaffold_122p00190 Brassica napus HOM05D004787 ORTHO05D006972 3.8e-71 273.9 362 43.9
Lsat_1_v5_gn_3_69560 Lactuca sativa HOM05D004787 ORTHO05D006972 2.3e-55 221.5 327 40.7
HanXRQChr16g0532221 Helianthus annuus HOM05D004787 ORTHO05D006972 3.3e-54 217.6 417 35.3
Cfa023088 Carpinus fangiana HOM05D004787 ORTHO05D006972 5.9e-48 196.8 539 33.6
AL1G49080 Arabidopsis lyrata HOM05D004787 ORTHO05D006972 1.7e-47 195.3 220 49.5
GSVIVG01001945001 Vitis vinifera HOM05D004787 ORTHO05D006972 3.5e-40 171.0 254 40.2
GSVIVG01035282001 Vitis vinifera HOM05D004787 ORTHO05D006972 3.5e-40 171.0 254 39.4
CDE02G3895 Ceratophyllum demersum HOM05D004787 ORTHO05D006972 1.2e-37 162.5 220 42.3
PSO339G1514 Papaver somniferum HOM05D004787 ORTHO05D303367 1.1e-22 112.8 459 27.7
Cc07_g12650 Coffea canephora HOM05D004787 ORTHO05D006972 4.0e-20 104.4 162 42.6
PSO409G0053 Papaver somniferum HOM05D004787 ORTHO05D006972 1.3e-18 99.4 453 24.7
Medtr8g023320 Medicago truncatula HOM05D004787 ORTHO05D006972 2.9e-18 98.2 125 42.4
Oeu031707.1 Olea europaea HOM05D004787 ORTHO05D006972 1.6e-13 82.4 109 45.9
Cpa.g.sc108.3 Carica papaya HOM05D004787 ORTHO05D006972 2.0e-11 75.5 95 52.6
Zm00001eb168130 Zea mays HOM05D004787 ORTHO05D001664 4.6e-08 64.3 74 41.9


User provided reference genes

Program Settings