Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cre02.g090600 Chlamydomonas reinhardtii HOM05D006038 ORTHO05D007547 5.4e-255 884.0 508 100.0
SMO367G0193 Selaginella moellendorffii HOM05D006038 ORTHO05D007547 3.6e-17 94.0 237 25.7
ATR0580G061 Amborella trichopoda HOM05D006038 ORTHO05D007547 2.3e-16 91.3 155 34.2
Lsat_1_v5_gn_8_64821 Lactuca sativa HOM05D006038 ORTHO05D007547 2.0e-15 88.2 158 34.2
Rhsim03G0259500 Rhododendron simsii HOM05D006038 ORTHO05D007547 2.6e-15 87.8 160 33.8
Thecc.09G154200 Theobroma cacao HOM05D006038 ORTHO05D007547 5.8e-15 86.7 157 36.3
PSO017G0013 Papaver somniferum HOM05D006038 ORTHO05D007547 7.5e-15 86.3 161 32.3
Potri.006G180300 Populus trichocarpa HOM05D006038 ORTHO05D007547 1.7e-14 85.1 157 33.1
Manes.14G113700 Manihot esculenta HOM05D006038 ORTHO05D007547 2.2e-14 84.7 157 33.1
PSO170G4900 Papaver somniferum HOM05D006038 ORTHO05D007547 2.2e-14 84.7 161 31.7
GSVIVG01023690001 Vitis vinifera HOM05D006038 ORTHO05D007547 2.2e-14 84.7 158 34.2
CBR_g22430 Chara braunii HOM05D006038 ORTHO05D007547 2.9e-14 84.3 261 28.0
Migut.J01393 Erythranthe guttata HOM05D006038 ORTHO05D007547 3.7e-14 84.0 157 32.5
Os08g0266600 Oryza sativa ssp. japonica HOM05D006038 ORTHO05D007547 6.4e-14 83.2 161 32.3
Zm00001eb177980 Zea mays HOM05D006038 ORTHO05D007547 8.3e-14 82.8 176 33.0
BcaNung02736 Brassica carinata HOM05D006038 ORTHO05D007547 1.1e-13 82.4 261 27.2
C07p58240 Brassica napus HOM05D006038 ORTHO05D007547 1.1e-13 82.4 261 27.2
Aqoxy7G02400 Aquilegia oxysepala HOM05D006038 ORTHO05D007547 1.4e-13 82.0 157 34.4
Cpa.g.sc199.14 Carica papaya HOM05D006038 ORTHO05D007547 1.9e-13 81.6 163 32.5
MBI15_g26068_MAGBIO Magnolia biondii HOM05D006038 ORTHO05D007547 2.4e-13 81.3 155 34.2
PGR114G0005 Punica granatum HOM05D006038 ORTHO05D007547 2.4e-13 81.3 162 32.7
PGR142G2424 Punica granatum HOM05D006038 ORTHO05D007547 2.4e-13 81.3 162 32.7
Sp7g28720 Schrenkiella parvula HOM05D006038 ORTHO05D007547 2.4e-13 81.3 158 31.0
Hund08960 Selenicereus undatus HOM05D006038 ORTHO05D007547 2.4e-13 81.3 246 26.4
BolC7t46282H Brassica oleracea HOM05D006038 ORTHO05D007547 3.2e-13 80.9 261 26.8
MELO3C004111.2 Cucumis melo HOM05D006038 ORTHO05D007547 3.2e-13 80.9 264 27.7
HanXRQChr06g0179781 Helianthus annuus HOM05D006038 ORTHO05D007547 3.2e-13 80.9 155 31.6
CANSAT11G1787 Cannabis sativa HOM05D006038 ORTHO05D007547 4.1e-13 80.5 155 33.5
Cfa020781 Carpinus fangiana HOM05D006038 ORTHO05D007547 4.1e-13 80.5 264 27.7
Gohir.A05G007900 Gossypium hirsutum HOM05D006038 ORTHO05D007547 4.1e-13 80.5 157 31.8
Atru.chr7.352 Acer truncatum HOM05D006038 ORTHO05D007547 7.1e-13 79.7 162 33.3
Nn8g40105 Nelumbo nucifera HOM05D006038 ORTHO05D007547 7.1e-13 79.7 261 26.8
Peaxi162Scf00563g00418 Petunia axillaris HOM05D006038 ORTHO05D007547 7.1e-13 79.7 156 32.1
AagrBONN_evm.TU.Sc2ySwM_117.2538 Anthoceros agrestis HOM05D006038 ORTHO05D007547 9.2e-13 79.3 155 34.8
Dinv42816 Davidia involucrata HOM05D006038 ORTHO05D007547 9.2e-13 79.3 158 32.9
Dinv43284 Davidia involucrata HOM05D006038 ORTHO05D007547 9.2e-13 79.3 158 32.9
THA.LOC104803556 Tarenaya hassleriana HOM05D006038 ORTHO05D007547 9.2e-13 79.3 261 27.2
BcaNung01557 Brassica carinata HOM05D006038 ORTHO05D007547 1.2e-12 79.0 156 32.1
A03p60370 Brassica napus HOM05D006038 ORTHO05D007547 1.2e-12 79.0 261 26.4
BraA03t15077Z Brassica rapa HOM05D006038 ORTHO05D007547 1.2e-12 79.0 261 26.4
CsaV3_2G007740 Cucumis sativus L. HOM05D006038 ORTHO05D007547 1.2e-12 79.0 264 27.7
Sabra06G0137300 Salix brachista HOM05D006038 ORTHO05D007547 1.2e-12 79.0 157 31.8
Actinidia38659 Actinidia chinensis HOM05D006038 ORTHO05D007547 1.6e-12 78.6 266 25.2
RcHm_v2.0_Chr4g0405491 Rosa chinensis HOM05D006038 ORTHO05D007547 2.1e-12 78.2 157 31.2
Gohir.D05G008700 Gossypium hirsutum HOM05D006038 ORTHO05D007547 2.7e-12 77.8 157 31.2
Gorai.009G008900 Gossypium raimondii HOM05D006038 ORTHO05D007547 2.7e-12 77.8 157 31.2
Sopen07g002150 Solanum pennellii HOM05D006038 ORTHO05D007547 2.7e-12 77.8 156 32.1
PGSC0003DMG400011212 Solanum tuberosum HOM05D006038 ORTHO05D007547 2.7e-12 77.8 156 32.1
MSTRG.6162 Avicennia marina HOM05D006038 ORTHO05D007547 3.5e-12 77.4 156 29.5
ECA236G4218 Erigeron canadensis HOM05D006038 ORTHO05D007547 3.5e-12 77.4 155 31.6
Solyc07g006010.3 Solanum lycopersicum HOM05D006038 ORTHO05D007547 3.5e-12 77.4 159 32.1
CSS0049632 Camellia sinensis var. sinensis HOM05D006038 ORTHO05D007547 4.6e-12 77.0 158 30.4
Carub.0007s0972 Capsella rubella HOM05D006038 ORTHO05D007547 4.6e-12 77.0 156 29.5
Cc06_g14480 Coffea canephora HOM05D006038 ORTHO05D007547 7.8e-12 76.3 154 32.5
Eucgr.K03188 Eucalyptus grandis HOM05D006038 ORTHO05D007547 7.8e-12 76.3 161 30.4
Glyma.17G071100 Glycine max HOM05D006038 ORTHO05D007547 7.8e-12 76.3 158 31.6
Lalb_Chr13g0300671 Lupinus albus HOM05D006038 ORTHO05D007547 7.8e-12 76.3 157 29.9
Prupe.1G102000 Prunus persica HOM05D006038 ORTHO05D007547 7.8e-12 76.3 157 30.6
AT4G30840 Arabidopsis thaliana HOM05D006038 ORTHO05D007547 1.0e-11 75.9 158 29.7
CSS0019709 Camellia sinensis var. sinensis HOM05D006038 ORTHO05D007547 1.0e-11 75.9 158 30.4
Ciclev10008825m.g Citrus clementina HOM05D006038 ORTHO05D007547 1.0e-11 75.9 161 30.4
DCAR_020091 Daucus carota HOM05D006038 ORTHO05D007547 1.0e-11 75.9 156 30.8
TWI63G0196 Tripterygium wilfordii HOM05D006038 ORTHO05D007547 1.0e-11 75.9 155 32.3
Lj4g0023904 Lotus japonicus HOM05D006038 ORTHO05D007547 1.3e-11 75.5 158 31.6
CSS0009428 Camellia sinensis var. sinensis HOM05D006038 ORTHO05D007547 2.3e-11 74.7 158 30.4
QL02p094222 Quercus lobata HOM05D006038 ORTHO05D007547 3.0e-11 74.3 159 32.1
CSS0006550 Camellia sinensis var. sinensis HOM05D006038 ORTHO05D007547 3.9e-11 73.9 159 30.2
CAN.G1190.21 Capsicum annuum HOM05D006038 ORTHO05D007547 3.9e-11 73.9 156 32.1
CARHR238700 Cardamine hirsuta HOM05D006038 ORTHO05D007547 3.9e-11 73.9 156 28.2
Glyma.02G206900 Glycine max HOM05D006038 ORTHO05D007547 3.9e-11 73.9 155 29.7
Phvul.003G153400 Phaseolus vulgaris HOM05D006038 ORTHO05D007547 3.9e-11 73.9 174 29.3
TPR.G22112 Trifolium pratense HOM05D006038 ORTHO05D007547 3.9e-11 73.9 159 32.1
Ah.14g084370 Amaranthus hybridus HOM05D001135 ORTHO05D001005 5.1e-11 73.6 157 29.9
AL7G21280 Arabidopsis lyrata HOM05D006038 ORTHO05D007547 5.1e-11 73.6 158 29.1
VMungo1215G1375 Vigna mungo HOM05D006038 ORTHO05D007547 5.1e-11 73.6 161 29.8
CiPaw.15G164200 Carya illinoinensis HOM05D006038 ORTHO05D007547 6.6e-11 73.2 159 32.1
Psat4g010160 Pisum sativum HOM05D006038 ORTHO05D007547 8.6e-11 72.8 158 30.4
CSS0047764 Camellia sinensis var. sinensis HOM05D006038 ORTHO05D007547 1.1e-10 72.4 165 28.5
Ca_21155_v3 Cicer arietinum L. HOM05D006038 ORTHO05D007547 1.1e-10 72.4 157 30.6
FvH4_4g09770 Fragaria vesca HOM05D006038 ORTHO05D007547 1.1e-10 72.4 157 31.8
FAN07G2585 Fragaria x ananassa HOM05D006038 ORTHO05D007547 1.1e-10 72.4 257 27.2
Medtr4g130280 Medicago truncatula HOM05D006038 ORTHO05D007547 1.5e-10 72.0 159 31.4
Pp3c6_28770 Physcomitrium patens HOM05D006038 ORTHO05D007547 1.5e-10 72.0 223 25.6
TAR625G0922 Trochodendron aralioides HOM05D006038 ORTHO05D007547 1.5e-10 72.0 157 31.2
HPP92_020613 Vanilla planifolia HOM05D006038 ORTHO05D007547 1.5e-10 72.0 164 29.3
EL10Ac8g18905 Beta vulgaris HOM05D006038 ORTHO05D007547 2.5e-10 71.2 156 28.8
SGA_v2.0_scaffold265G46074 Striga asiatica HOM05D006038 ORTHO05D007547 2.5e-10 71.2 162 30.2
AUR62025374 Chenopodium quinoa HOM05D006038 ORTHO05D007547 4.3e-10 70.5 155 27.7
FAN17G0258 Fragaria x ananassa HOM05D006038 ORTHO05D007547 4.3e-10 70.5 257 27.2
MD10G1281400 Malus domestica HOM05D006038 ORTHO05D007547 4.3e-10 70.5 157 29.9
Aa31LG2G19530 Aethionema arabicum HOM05D006038 ORTHO05D007547 5.6e-10 70.1 270 27.4
FAN22G1283 Fragaria x ananassa HOM05D006038 ORTHO05D007547 7.3e-10 69.7 257 27.2
A01p07320 Brassica napus HOM05D006038 ORTHO05D007547 1.2e-09 68.9 105 34.3
AUR62028377 Chenopodium quinoa HOM05D006038 ORTHO05D007547 2.8e-09 67.8 155 27.7
Thhalv10025548m.g Eutrema salsugineum HOM05D006038 ORTHO05D007547 8.1e-09 66.2 216 27.8
SEGI_08614 Sequoiadendron giganteum HOM05D006038 ORTHO05D007547 1.4e-08 65.5 108 33.3
CDE04G0171 Ceratophyllum demersum HOM05D006038 ORTHO05D007547 2.0e-07 61.6 156 28.8
Oeu027617.1 Olea europaea HOM05D006038 ORTHO05D007547 3.4e-07 60.8 131 32.1
CSS0029746 Camellia sinensis var. sinensis HOM05D006038 ORTHO05D007547 3.7e-06 57.4 158 27.8
vmacro06051 Vaccinium macrocarpon HOM05D006038 ORTHO05D007547 6.4e-06 56.6 98 33.7


User provided reference genes

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