Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cre02.g086100 Chlamydomonas reinhardtii HOM05D007571 ORTHO05D009439 1.0e-70 270.0 144 100.0
CDE04G1832 Ceratophyllum demersum HOM05D007571 ORTHO05D009439 3.3e-08 62.4 72 44.4
Nn6g34507 Nelumbo nucifera HOM05D007571 ORTHO05D009439 4.3e-08 62.0 91 41.8
TAR628G1270 Trochodendron aralioides HOM05D007571 ORTHO05D009439 7.4e-08 61.2 92 43.5
Ah.01g007010 Amaranthus hybridus HOM05D007571 ORTHO05D009439 1.3e-07 60.5 98 37.8
ClCG02G007100 Citrullus lanatus HOM05D007571 ORTHO05D009439 1.3e-07 60.5 87 42.5
Sed0007395 Sechium edule HOM05D007571 ORTHO05D009439 2.8e-07 59.3 112 37.5
CBR_g6736 Chara braunii HOM05D007571 ORTHO05D009439 3.7e-07 58.9 102 42.2
Rhsim05G0092500 Rhododendron simsii HOM05D007571 ORTHO05D009439 3.7e-07 58.9 73 42.5
Ciclev10029547m.g Citrus clementina HOM05D007571 ORTHO05D009439 4.8e-07 58.5 76 39.5
COL.COLO4_32496 Corchorus olitorius HOM05D007571 ORTHO05D009439 4.8e-07 58.5 73 39.7
vmacro19538 Vaccinium macrocarpon HOM05D007571 ORTHO05D009439 4.8e-07 58.5 74 45.9
Lsat_1_v5_gn_2_105800 Lactuca sativa HOM05D007571 ORTHO05D009439 6.2e-07 58.2 72 43.1
Duzib052G0547 Durio zibethinus HOM05D007571 ORTHO05D009439 8.1e-07 57.8 73 39.7
Gohir.A12G018900 Gossypium hirsutum HOM05D007571 ORTHO05D009439 8.1e-07 57.8 73 39.7
Gohir.D12G019350 Gossypium hirsutum HOM05D007571 ORTHO05D009439 8.1e-07 57.8 73 39.7
PSO675G4064 Papaver somniferum HOM05D007571 ORTHO05D009439 8.1e-07 57.8 89 40.4
QL11p029955 Quercus lobata HOM05D007571 ORTHO05D009439 8.1e-07 57.8 72 40.3
Atru.chr5.2324 Acer truncatum HOM05D007571 ORTHO05D009439 1.1e-06 57.4 73 38.4
CSS0048413 Camellia sinensis var. sinensis HOM05D007571 ORTHO05D009439 1.1e-06 57.4 75 42.7
Prupe.8G147200 Prunus persica HOM05D007571 ORTHO05D009439 1.1e-06 57.4 72 40.3
Aqoxy6G02559 Aquilegia oxysepala HOM05D007571 ORTHO05D009439 1.4e-06 57.0 74 41.9
BcaC08g43171 Brassica carinata HOM05D007571 ORTHO05D009439 1.4e-06 57.0 65 49.2
A06p03470 Brassica napus HOM05D007571 ORTHO05D009439 1.4e-06 57.0 65 49.2
C06p04720 Brassica napus HOM05D007571 ORTHO05D009439 1.4e-06 57.0 65 49.2
BraA06t23555Z Brassica rapa HOM05D007571 ORTHO05D009439 1.4e-06 57.0 65 49.2
DCAR_028375 Daucus carota HOM05D007571 ORTHO05D009439 1.4e-06 57.0 70 42.9
Lalb_Chr21g0308001 Lupinus albus HOM05D007571 ORTHO05D009439 1.4e-06 57.0 72 44.4
Sc05g0005590 Simmondsia chinensis HOM05D007571 ORTHO05D009439 1.4e-06 57.0 70 41.4
EL10Ac9g22184 Beta vulgaris HOM05D007571 ORTHO05D009439 1.8e-06 56.6 85 38.8
ECA238G3778 Erigeron canadensis HOM05D007571 ORTHO05D009439 1.8e-06 56.6 73 41.1
MD10G1108300 Malus domestica HOM05D007571 ORTHO05D009439 1.8e-06 56.6 72 38.9
Carub.0001s3916 Capsella rubella HOM05D007571 ORTHO05D009439 2.4e-06 56.2 65 47.7
CARHR040010 Cardamine hirsuta HOM05D007571 ORTHO05D009439 2.4e-06 56.2 68 42.6
AUR62030860 Chenopodium quinoa HOM05D007571 ORTHO05D009439 2.4e-06 56.2 71 38.0
Pp3c17_8360 Physcomitrium patens HOM05D007571 ORTHO05D009439 2.4e-06 56.2 109 38.5
BcaB07g33447 Brassica carinata HOM05D007571 ORTHO05D009439 3.1e-06 55.8 65 47.7
Lj5g0013426 Lotus japonicus HOM05D007571 ORTHO05D009439 3.1e-06 55.8 73 43.8
THA.LOC104825387 Tarenaya hassleriana HOM05D007571 ORTHO05D009439 3.1e-06 55.8 70 41.4
CANSAT25G0272 Cannabis sativa HOM05D007571 ORTHO05D009439 4.0e-06 55.5 73 41.1
CANSAT25G2750 Cannabis sativa HOM05D007571 ORTHO05D009439 4.0e-06 55.5 73 41.1
MELO3C018528.2 Cucumis melo HOM05D007571 ORTHO05D009439 4.0e-06 55.5 119 35.3
Thhalv10011862m.g Eutrema salsugineum HOM05D007571 ORTHO05D009439 4.0e-06 55.5 64 45.3
CAN.G1433.5 Capsicum annuum HOM05D007571 ORTHO05D009439 5.3e-06 55.1 73 38.4
Nitab4.5_0017347g0020 Nicotiana tabacum HOM05D007571 ORTHO05D009439 5.3e-06 55.1 73 42.5
Os03g0731100 Oryza sativa ssp. japonica HOM05D007571 ORTHO05D009439 5.3e-06 55.1 73 39.7
Phvul.007G046800 Phaseolus vulgaris HOM05D007571 ORTHO05D009439 5.3e-06 55.1 73 38.4
SEGI_38446 Sequoiadendron giganteum HOM05D007571 ORTHO05D009439 5.3e-06 55.1 95 38.9
GSVIVG01037807001 Vitis vinifera HOM05D007571 ORTHO05D009439 5.3e-06 55.1 78 42.3
Actinidia04391 Actinidia chinensis HOM05D007571 ORTHO05D009439 6.9e-06 54.7 78 43.6
Glyma.10G256000 Glycine max HOM05D007571 ORTHO05D009439 6.9e-06 54.7 70 40.0
Medtr1g106075 Medicago truncatula HOM05D007571 ORTHO05D009439 6.9e-06 54.7 65 46.2
PSO541G4064 Papaver somniferum HOM05D007571 ORTHO05D009439 6.9e-06 54.7 89 40.4
Sp1g36830 Schrenkiella parvula HOM05D007571 ORTHO05D009439 6.9e-06 54.7 64 43.8
Thecc.02G118900 Theobroma cacao HOM05D007571 ORTHO05D009439 6.9e-06 54.7 114 31.6
TPR.G21146 Trifolium pratense HOM05D007571 ORTHO05D009439 6.9e-06 54.7 65 47.7
TWI59G0511 Tripterygium wilfordii HOM05D007571 ORTHO05D009439 6.9e-06 54.7 73 41.1
arahy.Tifrunner.gnm1.ann1.A1M8SQ Arachis hypogaea HOM05D007571 ORTHO05D009439 9.0e-06 54.3 108 33.3
Eucgr.G01203 Eucalyptus grandis HOM05D007571 ORTHO05D009439 9.0e-06 54.3 73 43.8
Nitab4.5_0000687g0180 Nicotiana tabacum HOM05D007571 ORTHO05D009439 9.0e-06 54.3 73 41.1
PRCOL_00000042 Prasinoderma coloniale HOM05D028851 ORTHO05D009439 9.0e-06 54.3 62 45.2
Solyc05g150152.1 Solanum lycopersicum HOM05D007571 ORTHO05D009439 9.0e-06 54.3 73 39.7
Sopen05g033610 Solanum pennellii HOM05D007571 ORTHO05D009439 9.0e-06 54.3 73 39.7


User provided reference genes

Program Settings