Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cre02.g076150 Chlamydomonas reinhardtii HOM05D006205 ORTHO05D007703 4.8e-310 1067.4 704 100.0
PGR142G1368 Punica granatum HOM05D006205 ORTHO05D007703 4.1e-51 207.2 345 39.4
Glyma.19G144900 Glycine max HOM05D006205 ORTHO05D007703 1.2e-50 205.7 326 39.3
Phvul.001G139800 Phaseolus vulgaris HOM05D006205 ORTHO05D007703 1.2e-50 205.7 326 39.0
Hund19180 Selenicereus undatus HOM05D006205 ORTHO05D007703 1.5e-50 205.3 325 39.1
FvH4_6g22800 Fragaria vesca HOM05D006205 ORTHO05D007703 4.5e-50 203.8 322 39.1
FAN14G5729 Fragaria x ananassa HOM05D006205 ORTHO05D007703 4.5e-50 203.8 322 39.1
VMungo1383G0076 Vigna mungo HOM05D006205 ORTHO05D007703 4.5e-50 203.8 326 39.0
FAN02G0014 Fragaria x ananassa HOM05D006205 ORTHO05D007703 5.9e-50 203.4 322 39.1
MELO3C009648.2 Cucumis melo HOM05D006205 ORTHO05D007703 1.0e-49 202.6 326 38.3
unitig_899.g15081 Utricularia gibba HOM05D006205 ORTHO05D007703 1.3e-49 202.2 331 38.4
Manes.09G031300 Manihot esculenta HOM05D006205 ORTHO05D007703 1.7e-49 201.8 326 38.3
Sed0025317 Sechium edule HOM05D006205 ORTHO05D007703 1.7e-49 201.8 348 38.2
arahy.Tifrunner.gnm1.ann1.68EW5P Arachis hypogaea HOM05D006205 ORTHO05D007703 2.2e-49 201.4 326 38.3
arahy.Tifrunner.gnm1.ann1.ARGW3J Arachis hypogaea HOM05D006205 ORTHO05D007703 2.2e-49 201.4 326 38.3
RcHm_v2.0_Chr3g0480421 Rosa chinensis HOM05D006205 ORTHO05D007703 2.2e-49 201.4 322 38.8
TWI74G1063 Tripterygium wilfordii HOM05D006205 ORTHO05D007703 3.8e-49 200.7 326 38.7
vmacro09103 Vaccinium macrocarpon HOM05D006205 ORTHO05D007703 5.0e-49 200.3 326 39.0
Eucgr.K01821 Eucalyptus grandis HOM05D006205 ORTHO05D007703 6.5e-49 199.9 323 39.3
FAN05G5560 Fragaria x ananassa HOM05D006205 ORTHO05D007703 6.5e-49 199.9 322 38.5
AL3G23830 Arabidopsis lyrata HOM05D006205 ORTHO05D007703 8.5e-49 199.5 324 38.3
Carub.0003s1152 Capsella rubella HOM05D006205 ORTHO05D007703 8.5e-49 199.5 324 38.6
Migut.K00057 Erythranthe guttata HOM05D006205 ORTHO05D007703 8.5e-49 199.5 326 37.7
Nitab4.5_0006846g0010 Nicotiana tabacum HOM05D006205 ORTHO05D007703 8.5e-49 199.5 322 38.5
TPR.G4691 Trifolium pratense HOM05D006205 ORTHO05D007703 8.5e-49 199.5 322 38.5
HanXRQChr05g0132791 Helianthus annuus HOM05D006205 ORTHO05D007703 1.1e-48 199.1 346 37.0
Lsat_1_v5_gn_8_79241 Lactuca sativa HOM05D006205 ORTHO05D007703 1.1e-48 199.1 330 38.5
Sp3g10390 Schrenkiella parvula HOM05D006205 ORTHO05D007703 1.1e-48 199.1 324 38.9
Aqoxy1G00212 Aquilegia oxysepala HOM05D006205 ORTHO05D007703 1.4e-48 198.7 322 38.2
CAN.G85.9 Capsicum annuum HOM05D006205 ORTHO05D007703 1.4e-48 198.7 370 35.9
Gohir.A01G194800 Gossypium hirsutum HOM05D006205 ORTHO05D007703 1.4e-48 198.7 326 38.3
Gohir.D01G185000 Gossypium hirsutum HOM05D006205 ORTHO05D007703 1.4e-48 198.7 323 38.7
Mapoly0096s0035 Marchantia polymorpha HOM05D006205 ORTHO05D007703 1.4e-48 198.7 335 38.8
AUR62024356 Chenopodium quinoa HOM05D006205 ORTHO05D007703 1.9e-48 198.4 322 37.9
Gorai.002G228500 Gossypium raimondii HOM05D006205 ORTHO05D007703 1.9e-48 198.4 323 38.7
Solyc03g064030.3 Solanum lycopersicum HOM05D006205 ORTHO05D007703 1.9e-48 198.4 319 38.9
EL10Ac3g06974 Beta vulgaris HOM05D006205 ORTHO05D007703 2.5e-48 198.0 325 37.8
Ciclev10031918m.g Citrus clementina HOM05D006205 ORTHO05D007703 2.5e-48 198.0 326 38.3
Thhalv10021002m.g Eutrema salsugineum HOM05D006205 ORTHO05D007703 2.5e-48 198.0 331 38.4
Sabra06G0041700 Salix brachista HOM05D006205 ORTHO05D007703 2.5e-48 198.0 322 39.8
Sopen03g017680 Solanum pennellii HOM05D006205 ORTHO05D007703 2.5e-48 198.0 319 38.9
SGA_v2.0_scaffold94G28443 Striga asiatica HOM05D006205 ORTHO05D007703 2.5e-48 198.0 346 37.3
Thecc.05G167100 Theobroma cacao HOM05D006205 ORTHO05D007703 2.5e-48 198.0 326 39.3
Duzib106G0917 Durio zibethinus HOM05D006205 ORTHO05D007703 3.2e-48 197.6 326 38.0
Lalb_Chr18g0047621 Lupinus albus HOM05D006205 ORTHO05D007703 3.2e-48 197.6 344 36.3
Prupe.7G072500 Prunus persica HOM05D006205 ORTHO05D007703 3.2e-48 197.6 322 38.5
Zm00001eb236370 Zea mays HOM05D006205 ORTHO05D007703 3.2e-48 197.6 325 37.2
AT3G12150 Arabidopsis thaliana HOM05D006205 ORTHO05D007703 4.2e-48 197.2 324 38.6
MSTRG.26097 Avicennia marina HOM05D006205 ORTHO05D007703 4.2e-48 197.2 326 36.8
Ca_08497_v3 Cicer arietinum L. HOM05D006205 ORTHO05D007703 4.2e-48 197.2 326 38.0
Ca_29722_v3 Cicer arietinum L. HOM05D006205 ORTHO05D007703 4.2e-48 197.2 326 38.0
PSO384G4504 Papaver somniferum HOM05D006205 ORTHO05D007703 4.2e-48 197.2 326 37.4
THA.LOC104809921 Tarenaya hassleriana HOM05D006205 ORTHO05D007703 4.2e-48 197.2 345 38.8
AagrBONN_evm.TU.Sc2ySwM_228.3151 Anthoceros agrestis HOM05D006205 ORTHO05D007703 7.2e-48 196.4 370 37.3
Os02g0195000 Oryza sativa ssp. japonica HOM05D006205 ORTHO05D007703 7.2e-48 196.4 325 37.2
Sabra16G0053600 Salix brachista HOM05D006205 ORTHO05D007703 7.2e-48 196.4 326 38.7
Haze_19942 Corylus avellana HOM05D006205 ORTHO05D007703 9.4e-48 196.1 322 38.8
PSO339G0108 Papaver somniferum HOM05D006205 ORTHO05D007703 9.4e-48 196.1 326 37.4
BcaC01g04062 Brassica carinata HOM05D006205 ORTHO05D007703 1.2e-47 195.7 328 37.5
A03p37470 Brassica napus HOM05D006205 ORTHO05D007703 1.2e-47 195.7 325 37.8
C03p45470 Brassica napus HOM05D006205 ORTHO05D007703 1.2e-47 195.7 328 37.5
CSS0013544 Camellia sinensis var. sinensis HOM05D006205 ORTHO05D007703 1.2e-47 195.7 326 37.7
Psat3g069960 Pisum sativum HOM05D006205 ORTHO05D007703 1.2e-47 195.7 322 38.8
Potri.006G058400 Populus trichocarpa HOM05D006205 ORTHO05D007703 1.2e-47 195.7 326 39.0
BolC3t16816H Brassica oleracea HOM05D006205 ORTHO05D007703 1.6e-47 195.3 328 37.5
BraA03t12906Z Brassica rapa HOM05D006205 ORTHO05D007703 1.6e-47 195.3 325 37.8
Cpa.g.sc85.111 Carica papaya HOM05D006205 ORTHO05D007703 1.6e-47 195.3 325 38.2
Medtr7g092680 Medicago truncatula HOM05D006205 ORTHO05D007703 1.6e-47 195.3 322 37.9
BcaC05g29277 Brassica carinata HOM05D006205 ORTHO05D007703 2.1e-47 194.9 324 38.6
A05p37150 Brassica napus HOM05D006205 ORTHO05D007703 2.1e-47 194.9 324 38.6
C05p55580 Brassica napus HOM05D006205 ORTHO05D007703 2.1e-47 194.9 324 38.6
BolC5t34227H Brassica oleracea HOM05D006205 ORTHO05D007703 2.1e-47 194.9 324 38.6
BraA05t22513Z Brassica rapa HOM05D006205 ORTHO05D007703 2.1e-47 194.9 324 38.6
Cfa016888 Carpinus fangiana HOM05D006205 ORTHO05D007703 2.7e-47 194.5 318 39.0
ClCG10G017350 Citrullus lanatus HOM05D006205 ORTHO05D007703 3.6e-47 194.1 337 38.0
Nn2g15532 Nelumbo nucifera HOM05D006205 ORTHO05D007703 3.6e-47 194.1 324 37.3
Hma1.2p1_1575F.1_g291620 Hydrangea macrophylla HOM05D006205 ORTHO05D007703 6.1e-47 193.4 326 37.1
Actinidia17259 Actinidia chinensis HOM05D006205 ORTHO05D007703 7.9e-47 193.0 322 37.9
CDE10G0043 Ceratophyllum demersum HOM05D006205 ORTHO05D007703 1.0e-46 192.6 342 36.8
Duzib093G1988 Durio zibethinus HOM05D006205 ORTHO05D007703 1.0e-46 192.6 323 38.4
PGSC0003DMG400012937 Solanum tuberosum HOM05D006205 ORTHO05D007703 1.0e-46 192.6 379 36.1
Sc25g0005160 Simmondsia chinensis HOM05D006205 ORTHO05D007703 1.4e-46 192.2 322 37.6
Potri.016G049700 Populus trichocarpa HOM05D006205 ORTHO05D007703 1.8e-46 191.8 326 37.7
Lju124A32T75 Lonicera japonica HOM05D006205 ORTHO05D007703 2.3e-46 191.4 322 38.2
CiPaw.09G032800 Carya illinoinensis HOM05D006205 ORTHO05D007703 3.0e-46 191.0 326 37.7
Dinv24098 Davidia involucrata HOM05D006205 ORTHO05D007703 3.0e-46 191.0 326 37.1
TAR623G1003 Trochodendron aralioides HOM05D006205 ORTHO05D007703 3.0e-46 191.0 341 37.5
Cc06_g16310 Coffea canephora HOM05D006205 ORTHO05D007703 3.9e-46 190.7 319 37.3
CBR_g25855 Chara braunii HOM05D006205 ORTHO05D007703 6.7e-46 189.9 342 37.1
MD12G1062300 Malus domestica HOM05D006205 ORTHO05D007703 6.7e-46 189.9 318 38.4
SMO334G0020 Selaginella moellendorffii HOM05D006205 ORTHO05D007703 6.7e-46 189.9 159 63.5
ECA236G0538 Erigeron canadensis HOM05D006205 ORTHO05D007703 8.8e-46 189.5 310 39.4
QL07p022686 Quercus lobata HOM05D006205 ORTHO05D007703 8.8e-46 189.5 322 38.2
GSVIVG01033369001 Vitis vinifera HOM05D006205 ORTHO05D007703 1.1e-45 189.1 292 40.1
Aa31LG3G6360 Aethionema arabicum HOM05D006205 ORTHO05D007703 2.5e-45 188.0 323 38.4
SEGI_33856 Sequoiadendron giganteum HOM05D006205 ORTHO05D007703 4.3e-45 187.2 345 35.7
CANSAT64G2514 Cannabis sativa HOM05D006205 ORTHO05D007703 7.4e-45 186.4 141 65.2
HPP92_023778 Vanilla planifolia HOM05D006205 ORTHO05D007703 2.2e-44 184.9 159 59.1
ATR0605G163 Amborella trichopoda HOM05D006205 ORTHO05D007703 2.8e-44 184.5 344 36.0
Ah.13g076130 Amaranthus hybridus HOM05D006205 ORTHO05D007703 1.1e-43 182.6 320 38.4
COL.COLO4_36119 Corchorus olitorius HOM05D006205 ORTHO05D007703 1.4e-43 182.2 141 63.8
SalBow1G2518 Salvia bowleyana HOM05D006205 ORTHO05D007703 1.4e-43 182.2 326 37.4
Lj1g0022121 Lotus japonicus HOM05D006205 ORTHO05D007703 1.8e-43 181.8 357 35.6
BcaB04g18694 Brassica carinata HOM05D006205 ORTHO05D007703 2.4e-43 181.4 326 36.5
DCAR_013564 Daucus carota HOM05D006205 ORTHO05D007703 2.4e-43 181.4 160 58.8
AUR62025960 Chenopodium quinoa HOM05D006205 ORTHO05D007703 3.1e-43 181.0 330 35.8
Pp3c3_27370 Physcomitrium patens HOM05D006205 ORTHO05D007703 4.1e-43 180.6 326 36.8
QL93p2022_0017 Quercus lobata HOM05D006205 ORTHO05D007703 5.3e-43 180.3 322 38.8
CsaV3_3G039050 Cucumis sativus L. HOM05D006205 ORTHO05D007703 9.1e-43 179.5 137 64.2
Peaxi162Scf00285g00443 Petunia axillaris HOM05D006205 ORTHO05D007703 6.5e-41 173.3 129 65.9
Rhsim04G0098500 Rhododendron simsii HOM05D006205 ORTHO05D007703 2.6e-37 161.4 430 30.2
Dinv18116 Davidia involucrata HOM05D006205 ORTHO05D007703 4.5e-34 150.6 278 35.6
CARHR086730 Cardamine hirsuta HOM05D006205 ORTHO05D007703 1.4e-27 129.0 106 60.4
Nitab4.5_0000016g0140 Nicotiana tabacum HOM05D006205 ORTHO05D007703 6.5e-25 120.2 322 29.2
arahy.Tifrunner.gnm1.ann1.EV0IJD Arachis hypogaea HOM05D006205 ORTHO05D007703 6.3e-20 103.6 94 58.5
VMungo1080G0431 Vigna mungo HOM05D006205 ORTHO05D007703 1.1e-19 102.8 94 56.4
Glyma.02G176500 Glycine max HOM05D006205 ORTHO05D007703 1.5e-16 92.4 83 57.8
SalBow1G2557 Salvia bowleyana HOM05D006205 ORTHO05D007703 1.8e-14 85.5 81 51.9
MD14G1062700 Malus domestica HOM05D006205 ORTHO05D007703 9.8e-13 79.7 57 68.4
MBI04_g47239_MAGBIO Magnolia biondii HOM05D006205 ORTHO05D007703 4.1e-11 74.3 215 27.4
MBI04_g14269_MAGBIO Magnolia biondii HOM05D006205 ORTHO05D007703 6.6e-09 67.0 220 27.3
Medtr0001s0010 Medicago truncatula HOM05D006205 ORTHO05D007703 7.2e-08 63.5 80 50.0
MD12G1062200 Malus domestica HOM05D006205 ORTHO05D007703 1.2e-07 62.8 52 53.8
MD14G1062900 Malus domestica HOM05D006205 ORTHO05D007703 4.7e-07 60.8 90 37.8
Actinidia33641 Actinidia chinensis HOM05D006205 ORTHO05D007703 2.3e-06 58.5 94 36.2


User provided reference genes

Program Settings