Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cre02.g075000 Chlamydomonas reinhardtii HOM05D000414 ORTHO05D000276 5.6e-88 327.4 147 100.0
Cre02.g145900 Chlamydomonas reinhardtii HOM05D000414 ORTHO05D000276 4.8e-31 138.3 149 44.3
Cre17.g738000 Chlamydomonas reinhardtii HOM05D000414 ORTHO05D000276 6.5e-28 127.9 146 45.9
Cre17.g738050 Chlamydomonas reinhardtii HOM05D000414 ORTHO05D000276 2.2e-23 112.8 132 43.2
Cre02.g098500 Chlamydomonas reinhardtii HOM05D000414 ORTHO05D000276 3.5e-13 79.0 157 33.1
Medtr8g104870 Medicago truncatula HOM05D000414 ORTHO05D000276 1.0e-09 67.4 131 32.1
TPR.G7383 Trifolium pratense HOM05D000414 ORTHO05D000276 1.4e-09 67.0 133 33.1
Cre02.g097150 Chlamydomonas reinhardtii HOM05D000414 ORTHO05D000276 1.2e-08 63.9 171 28.1
Lsat_1_v5_gn_1_75060 Lactuca sativa HOM05D000414 ORTHO05D000276 1.2e-08 63.9 137 32.8
Psat7g125120 Pisum sativum HOM05D000414 ORTHO05D000276 1.5e-08 63.5 143 32.2
ECA234G1954 Erigeron canadensis HOM05D000414 ORTHO05D000276 5.8e-08 61.6 138 32.6
Lj4g0004596 Lotus japonicus HOM05D000414 ORTHO05D000276 1.3e-07 60.5 137 32.1
Psat7g009360 Pisum sativum HOM05D000414 ORTHO05D000276 1.3e-07 60.5 132 31.8
Ca_18678_v3 Cicer arietinum L. HOM05D000414 ORTHO05D001705 1.7e-07 60.1 143 32.2
Medtr5g017650 Medicago truncatula HOM05D000414 ORTHO05D000276 1.7e-07 60.1 131 29.8
Eucgr.B00708 Eucalyptus grandis HOM05D000414 ORTHO05D000276 3.7e-07 58.9 131 31.3
Eucgr.G02148 Eucalyptus grandis HOM05D000414 ORTHO05D000276 3.7e-07 58.9 134 30.6
Thecc.04G259500 Theobroma cacao HOM05D000414 ORTHO05D000276 3.7e-07 58.9 139 29.5
Phvul.003G292900 Phaseolus vulgaris HOM05D000414 ORTHO05D000276 6.4e-07 58.2 137 32.8
TPR.G30838 Trifolium pratense HOM05D000414 ORTHO05D000276 6.4e-07 58.2 144 31.2
Duzib151G0153 Durio zibethinus HOM05D000414 ORTHO05D000276 8.3e-07 57.8 138 30.4
Cc11_g08150 Coffea canephora HOM05D000414 ORTHO05D000276 1.1e-06 57.4 148 32.4
Glyma.07G211800 Glycine max HOM05D000414 ORTHO05D000276 1.1e-06 57.4 137 32.1
Glyma.10G183400 Glycine max HOM05D000414 ORTHO05D000276 1.1e-06 57.4 133 31.6
COL.COLO4_32663 Corchorus olitorius HOM05D000414 ORTHO05D000276 1.4e-06 57.0 144 29.9
Medtr4g086330 Medicago truncatula HOM05D000414 ORTHO05D000276 1.4e-06 57.0 142 31.0
TPR.G28487 Trifolium pratense HOM05D000414 ORTHO05D000276 1.4e-06 57.0 144 31.2
FAN15G0235 Fragaria x ananassa HOM05D000414 ORTHO05D000276 1.9e-06 56.6 135 28.1
FAN24G3383 Fragaria x ananassa HOM05D000414 ORTHO05D000276 1.9e-06 56.6 135 28.1
CiPaw.06G172900 Carya illinoinensis HOM05D000414 ORTHO05D000276 2.4e-06 56.2 130 31.5
Mapoly0014s0163 Marchantia polymorpha HOM05D000414 ORTHO05D000276 2.4e-06 56.2 135 31.1
Phvul.002G319100 Phaseolus vulgaris HOM05D000414 ORTHO05D000276 2.4e-06 56.2 133 28.6
CANSAT25G2234 Cannabis sativa HOM05D000414 ORTHO05D000276 3.2e-06 55.8 137 31.4
Glyma.02G175800 Glycine max HOM05D000414 ORTHO05D000276 3.2e-06 55.8 134 32.1
Lj6A741T79 Lonicera japonica HOM05D000414 ORTHO05D000276 3.2e-06 55.8 135 30.4
PGSC0003DMG400021768 Solanum tuberosum HOM05D000414 ORTHO05D000276 3.2e-06 55.8 139 31.7
VMungo0251G1270 Vigna mungo HOM05D000414 ORTHO05D000276 4.1e-06 55.5 137 31.4
Cfa007649 Carpinus fangiana HOM05D000414 ORTHO05D000276 5.4e-06 55.1 135 30.4
HanXRQChr12g0377751 Helianthus annuus HOM05D000414 ORTHO05D000276 5.4e-06 55.1 140 33.6
TPR.G32713 Trifolium pratense HOM05D000414 ORTHO05D000276 5.4e-06 55.1 131 29.8
Glyma.05G236300 Glycine max HOM05D000414 ORTHO05D000276 7.0e-06 54.7 135 31.1
HanXRQChr01g0023211 Helianthus annuus HOM05D000414 ORTHO05D000276 7.0e-06 54.7 138 31.2
Solyc12g037950.2 Solanum lycopersicum HOM05D000414 ORTHO05D000276 7.0e-06 54.7 139 31.7
Sopen12g017500 Solanum pennellii HOM05D000414 ORTHO05D000276 7.0e-06 54.7 139 31.7
arahy.Tifrunner.gnm1.ann1.J7B9GC Arachis hypogaea HOM05D000414 ORTHO05D000276 9.2e-06 54.3 138 29.0
Lsat_1_v5_gn_4_12941 Lactuca sativa HOM05D000414 ORTHO05D000276 9.2e-06 54.3 138 29.0
Phvul.002G319104 Phaseolus vulgaris HOM05D000414 ORTHO05D000276 9.2e-06 54.3 134 29.9
Phvul.010G072476 Phaseolus vulgaris HOM05D000414 ORTHO05D000276 9.2e-06 54.3 133 31.6


User provided reference genes

Program Settings