Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cre01.g070567 Chlamydomonas reinhardtii HOM05D004436 ORTHO05D005179 6.7e-271 936.8 488 100.0
AagrBONN_evm.TU.Sc2ySwM_368.2707 Anthoceros agrestis HOM05D004436 ORTHO05D005179 4.4e-20 103.6 455 26.8
Pp3c8_24340 Physcomitrium patens HOM05D004436 ORTHO05D005179 3.1e-18 97.4 434 27.4
CDE07G0038 Ceratophyllum demersum HOM05D004436 ORTHO05D005179 2.8e-11 74.3 238 25.2
MCO04G364 Micromonas commoda HOM05D004436 ORTHO05D005179 1.1e-10 72.4 425 23.5
COL.COLO4_30482 Corchorus olitorius HOM05D004436 ORTHO05D005179 7.0e-10 69.7 436 22.0
BcaB04g20967 Brassica carinata HOM05D004436 ORTHO05D005179 9.2e-10 69.3 412 24.8
Sc12g0010440 Simmondsia chinensis HOM05D004436 ORTHO05D005179 9.2e-10 69.3 428 25.2
TAR375G0086 Trochodendron aralioides HOM05D004436 ORTHO05D005179 1.2e-09 68.9 242 26.9
Rhsim08G0236100 Rhododendron simsii HOM05D004436 ORTHO05D005179 2.7e-09 67.8 434 22.4
FAN26G0630 Fragaria x ananassa HOM05D004436 ORTHO05D005179 4.5e-09 67.0 396 23.5
SEGI_22335 Sequoiadendron giganteum HOM05D004436 ORTHO05D005179 7.8e-09 66.2 239 25.5
vmacro22224 Vaccinium macrocarpon HOM05D004436 ORTHO05D005179 7.8e-09 66.2 445 21.8
BraA01t04010Z Brassica rapa HOM05D004436 ORTHO05D005179 1.3e-08 65.5 234 26.1
CANSAT56G1493 Cannabis sativa HOM05D004436 ORTHO05D005179 2.3e-08 64.7 361 22.2
Manes.11G023100 Manihot esculenta HOM05D004436 ORTHO05D005179 2.3e-08 64.7 178 28.7
Atru.chr1.3808 Acer truncatum HOM05D004436 ORTHO05D005179 3.8e-08 63.9 244 25.4
A01p39710 Brassica napus HOM05D004436 ORTHO05D005179 3.8e-08 63.9 234 25.6
Gorai.003G182300 Gossypium raimondii HOM05D004436 ORTHO05D005179 5.0e-08 63.5 241 24.1
COL.COLO4_17027 Corchorus olitorius HOM05D004436 ORTHO05D005179 8.6e-08 62.8 178 27.5
Potri.001G198600 Populus trichocarpa HOM05D004436 ORTHO05D005179 1.5e-07 62.0 249 25.3
Gohir.D03G171700 Gossypium hirsutum HOM05D004436 ORTHO05D005179 1.9e-07 61.6 241 24.5
Gohir.A03G000500 Gossypium hirsutum HOM05D004436 ORTHO05D005179 3.3e-07 60.8 435 22.1
Manes.04G142200 Manihot esculenta HOM05D004436 ORTHO05D005179 3.3e-07 60.8 251 26.3
CSS0015890 Camellia sinensis var. sinensis HOM05D004436 ORTHO05D005179 4.3e-07 60.5 392 23.7
Medtr2g037880 Medicago truncatula HOM05D004436 ORTHO05D005179 5.6e-07 60.1 185 27.6
HPP92_009424 Vanilla planifolia HOM05D004436 ORTHO05D005179 5.6e-07 60.1 432 21.3
CsaV3_7G034640 Cucumis sativus L. HOM05D004436 ORTHO05D005179 7.3e-07 59.7 191 27.2
Hma1.2p1_0496F.1_g166100 Hydrangea macrophylla HOM05D004436 ORTHO05D005179 7.3e-07 59.7 241 23.2
Thhalv10020760m.g Eutrema salsugineum HOM05D004436 ORTHO05D005179 9.5e-07 59.3 167 28.7
FAN02G3564 Fragaria x ananassa HOM05D004436 ORTHO05D005179 9.5e-07 59.3 185 28.6
FAN09G2135 Fragaria x ananassa HOM05D004436 ORTHO05D005179 9.5e-07 59.3 307 24.8
MD09G1187900 Malus domestica HOM05D004436 ORTHO05D005179 9.5e-07 59.3 166 27.1
Medtr7g104810 Medicago truncatula HOM05D004436 ORTHO05D005179 9.5e-07 59.3 203 26.1
FvH4_6g34180 Fragaria vesca HOM05D004436 ORTHO05D005179 1.2e-06 58.9 241 26.6
PGR119G1065 Punica granatum HOM05D004436 ORTHO05D005179 1.2e-06 58.9 245 24.5
CBR_g45967 Chara braunii HOM05D004436 ORTHO05D005179 1.6e-06 58.5 410 21.7
Eucgr.F03167 Eucalyptus grandis HOM05D004436 ORTHO05D005179 1.6e-06 58.5 170 27.1
Thecc.03G227200 Theobroma cacao HOM05D004436 ORTHO05D005179 1.6e-06 58.5 371 22.1
Actinidia32167 Actinidia chinensis HOM05D004436 ORTHO05D005179 2.1e-06 58.2 456 21.9
BcaC09g48383 Brassica carinata HOM05D004436 ORTHO05D005179 2.1e-06 58.2 228 24.6
C01p50660 Brassica napus HOM05D004436 ORTHO05D005179 2.1e-06 58.2 228 24.6
BolC1t05015H Brassica oleracea HOM05D004436 ORTHO05D005179 2.1e-06 58.2 228 24.6
FvH4_6g47280 Fragaria vesca HOM05D004436 ORTHO05D005179 2.1e-06 58.2 392 23.0
Sabra01G0155800 Salix brachista HOM05D004436 ORTHO05D005179 2.1e-06 58.2 377 21.5
ATR0762G049 Amborella trichopoda HOM05D004436 ORTHO05D005179 2.8e-06 57.8 471 21.7
Dinv03512 Davidia involucrata HOM05D004436 ORTHO05D005179 2.8e-06 57.8 448 22.8
Psat1g144000 Pisum sativum HOM05D004436 ORTHO05D005179 2.8e-06 57.8 233 25.3
RcHm_v2.0_Chr2g0144531 Rosa chinensis HOM05D004436 ORTHO05D005179 2.8e-06 57.8 187 28.3
Sed0007780 Sechium edule HOM05D004436 ORTHO05D005179 2.8e-06 57.8 231 26.8
Sed0020704 Sechium edule HOM05D004436 ORTHO05D005179 2.8e-06 57.8 206 26.7
ClCG09G000840 Citrullus lanatus HOM05D004436 ORTHO05D005179 3.6e-06 57.4 221 28.1
Nn6g35749 Nelumbo nucifera HOM05D004436 ORTHO05D005179 3.6e-06 57.4 142 30.3
GSVIVG01016817001 Vitis vinifera HOM05D004436 ORTHO05D005179 3.6e-06 57.4 235 26.4
FAN05G5343 Fragaria x ananassa HOM05D004436 ORTHO05D005179 4.7e-06 57.0 241 26.1
FAN14G2695 Fragaria x ananassa HOM05D004436 ORTHO05D005179 6.1e-06 56.6 399 23.8
CSS0033207 Camellia sinensis var. sinensis HOM05D004436 ORTHO05D005179 8.0e-06 56.2 228 25.9
Cpa.g.sc25.86 Carica papaya HOM05D004436 ORTHO05D005179 8.0e-06 56.2 237 25.3
CiPaw.01G221800 Carya illinoinensis HOM05D004436 ORTHO05D005179 8.0e-06 56.2 177 25.4
Duzib205G0267 Durio zibethinus HOM05D004436 ORTHO05D005179 8.0e-06 56.2 239 22.2


User provided reference genes

Program Settings