Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cre01.g063267 Chlamydomonas reinhardtii HOM05D003649 ORTHO05D004498 3.8e-275 951.0 541 100.0
MCO03G098 Micromonas commoda HOM05D003649 ORTHO05D004498 4.0e-107 392.9 425 53.4
Mapoly0048s0058 Marchantia polymorpha HOM05D003649 ORTHO05D004498 4.3e-101 372.9 347 55.0
Pp3c10_5710 Physcomitrium patens HOM05D003649 ORTHO05D004498 2.8e-100 370.2 470 47.4
PRCOL_00003636 Prasinoderma coloniale HOM05D003649 ORTHO05D004498 2.8e-100 370.2 417 52.3
Pp3c14_4070 Physcomitrium patens HOM05D003649 ORTHO05D004498 3.6e-100 369.8 463 47.1
AagrBONN_evm.TU.Sc2ySwM_117.301 Anthoceros agrestis HOM05D003649 ORTHO05D004498 1.7e-94 350.9 293 57.0
Cc05_g10190 Coffea canephora HOM05D003649 ORTHO05D004498 2.3e-94 350.5 318 54.7
CBR_g984 Chara braunii HOM05D003649 ORTHO05D004498 1.1e-93 348.2 487 43.7
TAR627G1042 Trochodendron aralioides HOM05D003649 ORTHO05D004498 1.5e-93 347.8 338 53.8
CANSAT01G2347 Cannabis sativa HOM05D003649 ORTHO05D004498 1.9e-93 347.4 340 53.5
QL02p065039 Quercus lobata HOM05D003649 ORTHO05D004498 4.3e-93 346.3 477 43.2
SMO358G0130 Selaginella moellendorffii HOM05D003649 ORTHO05D004498 7.3e-93 345.5 471 47.1
MBI17_g43195_MAGBIO Magnolia biondii HOM05D003649 ORTHO05D004498 9.6e-93 345.1 341 54.3
CDE06G0350 Ceratophyllum demersum HOM05D003649 ORTHO05D004498 1.1e-91 341.7 331 54.4
Manes.14G152600 Manihot esculenta HOM05D003649 ORTHO05D004498 1.1e-91 341.7 315 53.3
Duzib168G1903 Durio zibethinus HOM05D003649 ORTHO05D004498 2.4e-91 340.5 341 51.6
Manes.14G150400 Manihot esculenta HOM05D003649 ORTHO05D004498 4.0e-91 339.7 315 53.0
Ciclev10023274m.g Citrus clementina HOM05D003649 ORTHO05D004498 6.9e-91 339.0 323 53.9
GSVIVG01038352001 Vitis vinifera HOM05D003649 ORTHO05D004498 6.9e-91 339.0 339 51.0
Glyma.03G190900 Glycine max HOM05D003649 ORTHO05D004498 9.0e-91 338.6 340 51.5
Atru.chr3.3291 Acer truncatum HOM05D003649 ORTHO05D004498 1.2e-90 338.2 317 54.6
DCAR_002270 Daucus carota HOM05D003649 ORTHO05D004498 1.2e-90 338.2 338 51.5
Eucgr.F01411 Eucalyptus grandis HOM05D003649 ORTHO05D004498 1.2e-90 338.2 311 55.0
Prupe.4G148600 Prunus persica HOM05D003649 ORTHO05D004498 1.2e-90 338.2 476 43.3
Phvul.004G052800 Phaseolus vulgaris HOM05D003649 ORTHO05D004498 1.5e-90 337.8 460 44.3
Nitab4.5_0001864g0020 Nicotiana tabacum HOM05D003649 ORTHO05D004498 3.4e-90 336.7 317 52.4
Os09g0352400 Oryza sativa ssp. japonica HOM05D003649 ORTHO05D004498 3.4e-90 336.7 331 52.0
Actinidia14919 Actinidia chinensis HOM05D003649 ORTHO05D004498 5.8e-90 335.9 473 43.3
ATR1132G059 Amborella trichopoda HOM05D003649 ORTHO05D004498 5.8e-90 335.9 452 44.2
Aa31LG2G14410 Aethionema arabicum HOM05D003649 ORTHO05D004498 7.6e-90 335.5 336 51.8
Gorai.001G124600 Gossypium raimondii HOM05D003649 ORTHO05D004498 7.6e-90 335.5 341 51.0
Lj2g0021753 Lotus japonicus HOM05D003649 ORTHO05D004498 7.6e-90 335.5 340 51.5
Sc26g0001160 Simmondsia chinensis HOM05D003649 ORTHO05D004498 7.6e-90 335.5 457 44.4
CSS0018218 Camellia sinensis var. sinensis HOM05D003649 ORTHO05D004498 1.3e-89 334.7 345 51.3
arahy.Tifrunner.gnm1.ann1.2990BW Arachis hypogaea HOM05D003649 ORTHO05D004498 1.7e-89 334.3 340 49.7
Glyma.05G087100 Glycine max HOM05D003649 ORTHO05D004498 2.2e-89 334.0 340 51.2
CSS0028028 Camellia sinensis var. sinensis HOM05D003649 ORTHO05D004498 2.9e-89 333.6 345 51.3
Gohir.A07G112700 Gossypium hirsutum HOM05D003649 ORTHO05D004498 3.8e-89 333.2 341 50.7
MSTRG.6707 Avicennia marina HOM05D003649 ORTHO05D004498 4.9e-89 332.8 344 50.0
Rhsim09G0104200 Rhododendron simsii HOM05D003649 ORTHO05D004498 4.9e-89 332.8 338 51.2
CiPaw.08G013900 Carya illinoinensis HOM05D003649 ORTHO05D004498 6.4e-89 332.4 344 51.2
Medtr5g025980 Medicago truncatula HOM05D003649 ORTHO05D004498 6.4e-89 332.4 459 42.7
Gohir.D07G116200 Gossypium hirsutum HOM05D003649 ORTHO05D004498 8.4e-89 332.0 341 50.4
GSVIVG01011050001 Vitis vinifera HOM05D003649 ORTHO05D004498 8.4e-89 332.0 339 49.3
AT1G31660 Arabidopsis thaliana HOM05D003649 ORTHO05D004498 1.1e-88 331.6 329 51.4
PGR142G4312 Punica granatum HOM05D003649 ORTHO05D004498 1.1e-88 331.6 472 42.8
HanXRQChr13g0424451 Helianthus annuus HOM05D003649 ORTHO05D004498 1.4e-88 331.3 339 49.9
Ca_25060_v3 Cicer arietinum L. HOM05D003649 ORTHO05D004498 2.4e-88 330.5 460 42.6
Aqoxy1G02521 Aquilegia oxysepala HOM05D003649 ORTHO05D004498 3.2e-88 330.1 438 42.9
arahy.Tifrunner.gnm1.ann1.V43L5Z Arachis hypogaea HOM05D003649 ORTHO05D004498 3.2e-88 330.1 344 50.9
FAN21G3990 Fragaria x ananassa HOM05D003649 ORTHO05D004498 3.2e-88 330.1 477 43.6
SGA_v2.0_scaffold73G24356 Striga asiatica HOM05D003649 ORTHO05D004498 4.2e-88 329.7 347 50.1
Thecc.09G274600 Theobroma cacao HOM05D003649 ORTHO05D004498 4.2e-88 329.7 341 50.7
vmacro10596 Vaccinium macrocarpon HOM05D003649 ORTHO05D004498 4.2e-88 329.7 338 50.9
FAN16G3269 Fragaria x ananassa HOM05D003649 ORTHO05D004498 7.1e-88 328.9 478 43.3
FAN21G1332 Fragaria x ananassa HOM05D003649 ORTHO05D004498 9.3e-88 328.6 476 43.5
Actinidia37054 Actinidia chinensis HOM05D003649 ORTHO05D004498 1.2e-87 328.2 464 43.3
Nitab4.5_0001924g0070 Nicotiana tabacum HOM05D003649 ORTHO05D004498 1.2e-87 328.2 356 48.9
Oeu058434.1 Olea europaea HOM05D003649 ORTHO05D004498 2.1e-87 327.4 348 50.0
PSO675G2950 Papaver somniferum HOM05D003649 ORTHO05D004498 2.1e-87 327.4 477 43.0
Peaxi162Scf00111g00723 Petunia axillaris HOM05D003649 ORTHO05D004498 2.7e-87 327.0 339 49.0
Sopen07g029910 Solanum pennellii HOM05D003649 ORTHO05D004498 2.7e-87 327.0 343 49.3
PGSC0003DMG400027653 Solanum tuberosum HOM05D003649 ORTHO05D004498 2.7e-87 327.0 343 49.3
Potri.001G394000 Populus trichocarpa HOM05D003649 ORTHO05D004498 3.5e-87 326.6 470 41.3
FvH4_3g16580 Fragaria vesca HOM05D003649 ORTHO05D004498 4.6e-87 326.2 479 44.1
Potri.011G112500 Populus trichocarpa HOM05D003649 ORTHO05D004498 4.6e-87 326.2 469 41.8
COL.COLO4_24336 Corchorus olitorius HOM05D003649 ORTHO05D004498 7.9e-87 325.5 280 55.7
SalBow6G0551 Salvia bowleyana HOM05D003649 ORTHO05D004498 7.9e-87 325.5 323 49.5
TWI38G0227 Tripterygium wilfordii HOM05D003649 ORTHO05D004498 7.9e-87 325.5 343 49.6
Cfa011266 Carpinus fangiana HOM05D003649 ORTHO05D004498 1.0e-86 325.1 341 51.0
arahy.Tifrunner.gnm1.ann1.FP5V95 Arachis hypogaea HOM05D003649 ORTHO05D004498 1.3e-86 324.7 366 46.7
Lalb_Chr21g0316901 Lupinus albus HOM05D003649 ORTHO05D004498 1.3e-86 324.7 317 50.5
SalBow5G3252 Salvia bowleyana HOM05D003649 ORTHO05D004498 2.3e-86 323.9 343 48.1
SalBow8G0566 Salvia bowleyana HOM05D003649 ORTHO05D004498 2.3e-86 323.9 323 49.2
ECA236G2713 Erigeron canadensis HOM05D003649 ORTHO05D004498 3.0e-86 323.6 341 48.7
BcaB03g13795 Brassica carinata HOM05D003649 ORTHO05D004498 3.9e-86 323.2 338 48.8
A07p09400 Brassica napus HOM05D003649 ORTHO05D004498 3.9e-86 323.2 333 49.5
C07p14470 Brassica napus HOM05D003649 ORTHO05D004498 3.9e-86 323.2 333 49.5
BraA07t28735Z Brassica rapa HOM05D003649 ORTHO05D004498 3.9e-86 323.2 333 49.5
Nn7g38381 Nelumbo nucifera HOM05D003649 ORTHO05D004498 5.1e-86 322.8 457 41.8
THA.LOC104814384 Tarenaya hassleriana HOM05D003649 ORTHO05D004498 5.1e-86 322.8 343 51.0
RcHm_v2.0_Chr5g0027651 Rosa chinensis HOM05D003649 ORTHO05D004498 8.7e-86 322.0 489 41.5
BolC7t41946H Brassica oleracea HOM05D003649 ORTHO05D004498 1.1e-85 321.6 333 49.2
Lsat_1_v5_gn_5_148460 Lactuca sativa HOM05D003649 ORTHO05D004498 1.5e-85 321.2 339 49.0
MD10G1195400 Malus domestica HOM05D003649 ORTHO05D004498 1.9e-85 320.9 476 42.4
Psat2g144640 Pisum sativum HOM05D003649 ORTHO05D004498 1.9e-85 320.9 449 43.4
Cpa.g.sc54.5 Carica papaya HOM05D003649 ORTHO05D004498 2.5e-85 320.5 368 47.6
FAN11G3158 Fragaria x ananassa HOM05D003649 ORTHO05D004498 2.5e-85 320.5 488 41.6
Hma1.2p1_0505F.1_g168130 Hydrangea macrophylla HOM05D003649 ORTHO05D004498 2.5e-85 320.5 454 42.3
Hund24921 Selenicereus undatus HOM05D003649 ORTHO05D004498 4.3e-85 319.7 472 42.4
PSO541G1065 Papaver somniferum HOM05D003649 ORTHO05D004498 5.6e-85 319.3 477 42.1
MELO3C024126.2 Cucumis melo HOM05D003649 ORTHO05D004498 7.4e-85 318.9 340 49.1
Sabra11G0099700 Salix brachista HOM05D003649 ORTHO05D004498 9.6e-85 318.5 485 40.4
Sp1g27340 Schrenkiella parvula HOM05D003649 ORTHO05D004498 9.6e-85 318.5 342 49.4
Sed0023018 Sechium edule HOM05D003649 ORTHO05D004498 9.6e-85 318.5 318 49.7
BcaB07g32813 Brassica carinata HOM05D003649 ORTHO05D004498 1.3e-84 318.2 315 51.1
CARHR286950 Cardamine hirsuta HOM05D003649 ORTHO05D004498 1.3e-84 318.2 426 43.0
CsaV3_7G025330 Cucumis sativus L. HOM05D003649 ORTHO05D004498 1.3e-84 318.2 340 49.1
FAN25G2823 Fragaria x ananassa HOM05D003649 ORTHO05D004498 1.6e-84 317.8 476 41.6
AUR62036018 Chenopodium quinoa HOM05D003649 ORTHO05D004498 2.1e-84 317.4 340 49.1
Ah.13g074570 Amaranthus hybridus HOM05D003649 ORTHO05D004498 3.7e-84 316.6 473 41.9
TPR.G34458 Trifolium pratense HOM05D003649 ORTHO05D004498 4.8e-84 316.2 468 41.7
arahy.Tifrunner.gnm1.ann1.956DWW Arachis hypogaea HOM05D003649 ORTHO05D004498 2.4e-83 313.9 324 51.2
Carub.0001s2998 Capsella rubella HOM05D003649 ORTHO05D004498 4.0e-83 313.2 355 47.0
ClCG09G009520 Citrullus lanatus HOM05D003649 ORTHO05D004498 4.0e-83 313.2 356 46.9
Solyc07g056550.3 Solanum lycopersicum HOM05D003649 ORTHO05D004498 6.9e-83 312.4 325 50.2
EL10Ac3g06484 Beta vulgaris HOM05D003649 ORTHO05D004498 1.2e-82 311.6 472 40.7
Migut.M00658 Erythranthe guttata HOM05D003649 ORTHO05D004498 1.5e-82 311.2 346 48.3
A09p34660 Brassica napus HOM05D003649 ORTHO05D004498 7.6e-82 308.9 319 49.8
BraA09t39000Z Brassica rapa HOM05D003649 ORTHO05D004498 2.9e-81 307.0 319 50.2
PSO339G1025 Papaver somniferum HOM05D003649 ORTHO05D004498 2.4e-80 303.9 352 46.6
Thhalv10007604m.g Eutrema salsugineum HOM05D003649 ORTHO05D004498 4.2e-80 303.1 441 41.0
PSO339G4670 Papaver somniferum HOM05D003649 ORTHO05D004498 7.1e-80 302.4 352 46.6
CANSAT80G0167 Cannabis sativa HOM05D003649 ORTHO05D004498 2.7e-79 300.4 241 58.5
AUR62035508 Chenopodium quinoa HOM05D003649 ORTHO05D004498 1.0e-78 298.5 318 50.3
MD05G1209000 Malus domestica HOM05D003649 ORTHO05D004498 1.3e-78 298.1 434 43.3
VMungo1127G0750 Vigna mungo HOM05D003649 ORTHO05D004498 3.9e-78 296.6 296 51.4
Aqoxy5G01320 Aquilegia oxysepala HOM05D003649 ORTHO05D004498 2.1e-76 290.8 293 50.9
EL10Ac3g06580 Beta vulgaris HOM05D003649 ORTHO05D004498 3.7e-76 290.0 343 46.1
Gohir.A09G098001 Gossypium hirsutum HOM05D003649 ORTHO05D004498 1.1e-75 288.5 229 58.5
unitig_748.g7599 Utricularia gibba HOM05D003649 ORTHO05D004498 2.4e-75 287.3 468 40.8
Migut.M00659 Erythranthe guttata HOM05D003649 ORTHO05D004498 3.1e-75 287.0 323 47.4
Lj1C808T9 Lonicera japonica HOM05D003649 ORTHO05D004498 6.9e-75 285.8 343 46.1
TPR.G9666 Trifolium pratense HOM05D003649 ORTHO05D004498 2.6e-74 283.9 288 51.4
Rhsim09G0104400 Rhododendron simsii HOM05D003649 ORTHO05D004498 2.2e-73 280.8 335 46.9
HPP92_001514 Vanilla planifolia HOM05D003649 ORTHO05D004498 5.5e-72 276.2 459 39.0
Zm00001eb065940 Zea mays HOM05D003649 ORTHO05D004498 1.5e-69 268.1 479 39.2
Thecc.09G275100 Theobroma cacao HOM05D003649 ORTHO05D004498 2.5e-69 267.3 291 48.8
Migut.J00669 Erythranthe guttata HOM05D003649 ORTHO05D004498 1.1e-67 261.9 346 41.3
BcaC06g35364 Brassica carinata HOM05D003649 ORTHO05D004498 2.4e-67 260.8 251 51.0
A07p11220 Brassica napus HOM05D003649 ORTHO05D004498 2.4e-67 260.8 251 51.0
BcaC05g27183 Brassica carinata HOM05D003649 ORTHO05D004498 4.1e-67 260.0 326 44.5
BraA07t28915Z Brassica rapa HOM05D003649 ORTHO05D004498 6.9e-67 259.2 251 50.6
vmacro10597 Vaccinium macrocarpon HOM05D003649 ORTHO05D004498 1.2e-66 258.5 294 44.2
Haze_02513 Corylus avellana HOM05D003649 ORTHO05D004498 2.2e-65 254.2 514 36.8
A07p08470 Brassica napus HOM05D003649 ORTHO05D004498 2.9e-65 253.8 246 50.4
COL.COLO4_22663 Corchorus olitorius HOM05D003649 ORTHO05D004498 5.5e-64 249.6 251 49.4
Thhalv10028678m.g Eutrema salsugineum HOM05D003649 ORTHO05D004498 1.4e-62 245.0 247 48.6
BolC7t42199H Brassica oleracea HOM05D003649 ORTHO05D004498 5.1e-62 243.0 230 51.3
C07p13190 Brassica napus HOM05D003649 ORTHO05D004498 1.1e-61 241.9 335 42.1
BolC7t41812H Brassica oleracea HOM05D003649 ORTHO05D004498 1.1e-61 241.9 335 42.1
C07p16930 Brassica napus HOM05D003649 ORTHO05D004498 3.3e-61 240.4 276 46.0
BolC5t31810H Brassica oleracea HOM05D003649 ORTHO05D004498 1.1e-59 235.3 259 49.0
Haze_18856 Corylus avellana HOM05D003649 ORTHO05D004498 9.1e-59 232.3 510 33.9
BcaC06g35591 Brassica carinata HOM05D003649 ORTHO05D004498 1.0e-57 228.8 324 41.7
Ah.13g066610 Amaranthus hybridus HOM05D003649 ORTHO05D004498 3.8e-57 226.9 417 37.2
CANSAT54G0397 Cannabis sativa HOM05D003649 ORTHO05D004498 3.2e-56 223.8 194 56.2
Cfa024010 Carpinus fangiana HOM05D003649 ORTHO05D004498 6.7e-54 216.1 521 33.4
RcHm_v2.0_Chr6g0291881 Rosa chinensis HOM05D003649 ORTHO05D004498 9.7e-53 212.2 356 38.2
SEGI_32462 Sequoiadendron giganteum HOM05D003649 ORTHO05D004498 1.1e-45 188.7 125 69.6
Pp3c1_22730 Physcomitrium patens HOM05D003649 ORTHO05D004498 2.4e-43 181.0 153 56.9
arahy.Tifrunner.gnm1.ann1.KE86EX Arachis hypogaea HOM05D003649 ORTHO05D004498 2.3e-38 164.5 203 43.3
Atru.chr3.2262 Acer truncatum HOM05D003649 ORTHO05D004498 4.8e-36 156.8 133 55.6
Atru.chr3.2268 Acer truncatum HOM05D003649 ORTHO05D004498 4.8e-36 156.8 133 55.6
Cfa011268 Carpinus fangiana HOM05D007039 ORTHO05D008886 2.7e-31 141.0 326 35.6
SEGI_37931 Sequoiadendron giganteum HOM05D003649 ORTHO05D004498 7.5e-29 132.9 94 62.8
arahy.Tifrunner.gnm1.ann1.S7QI7K Arachis hypogaea HOM05D003649 ORTHO05D004498 2.9e-25 120.9 166 42.2
Sabra16G0258400 Salix brachista HOM05D003649 ORTHO05D004498 3.8e-25 120.6 139 45.3
arahy.Tifrunner.gnm1.ann1.CT835L Arachis hypogaea HOM05D003649 ORTHO05D004498 7.5e-21 106.3 119 43.7
BolC9t56391H Brassica oleracea HOM05D003649 ORTHO05D004498 1.8e-19 101.7 99 46.5
Actinidia13653 Actinidia chinensis HOM05D003649 ORTHO05D004498 3.1e-19 100.9 131 43.5
RhsimUnG0127900 Rhododendron simsii HOM05D003649 ORTHO05D004498 2.7e-18 97.8 82 53.7
AL6G50590 Arabidopsis lyrata HOM05D003649 ORTHO05D004498 5.9e-18 96.7 111 45.0
C09p35520 Brassica napus HOM05D003649 ORTHO05D004498 1.3e-17 95.5 91 48.4
A09p28020 Brassica napus HOM05D003649 ORTHO05D004498 2.3e-17 94.7 91 49.5
BraA07t28632Z Brassica rapa HOM05D003649 ORTHO05D004498 3.8e-17 94.0 98 46.9
BcaC05g27926 Brassica carinata HOM05D003649 ORTHO05D004498 4.6e-10 70.5 167 29.9
BcaC04g21367 Brassica carinata HOM05D001554 ORTHO05D001481 3.0e-09 67.8 53 52.8
C09p32650 Brassica napus HOM05D003649 ORTHO05D004498 3.0e-09 67.8 53 52.8
DCAR_030782 Daucus carota HOM05D003649 ORTHO05D004498 3.6e-07 60.8 56 50.0
MBI19_g34544_MAGBIO Magnolia biondii HOM05D000961 ORTHO05D000841 8.9e-06 56.2 57 52.6


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