Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cre01.g055151 Chlamydomonas reinhardtii HOM05D007927 ORTHO05D010029 3.5e-148 528.5 309 100.0
Pp3c24_20210 Physcomitrium patens HOM05D007927 ORTHO05D010029 5.1e-22 109.4 143 42.7
Os12g0189700 Oryza sativa ssp. japonica HOM05D007927 ORTHO05D010029 1.9e-21 107.5 135 45.9
AagrBONN_evm.TU.Sc2ySwM_344.4939 Anthoceros agrestis HOM05D007927 ORTHO05D010029 7.3e-21 105.5 141 38.3
ATR0584G243 Amborella trichopoda HOM05D007927 ORTHO05D010029 1.4e-19 101.3 135 42.2
Dinv07117 Davidia involucrata HOM05D007927 ORTHO05D010029 5.2e-19 99.4 141 38.3
Cfa002902 Carpinus fangiana HOM05D007927 ORTHO05D001116 6.8e-19 99.0 135 40.7
Potri.005G063600 Populus trichocarpa HOM05D007927 ORTHO05D010029 8.9e-19 98.6 135 38.5
vmacro18670 Vaccinium macrocarpon HOM05D007927 ORTHO05D010029 1.2e-18 98.2 137 40.9
CSS0028810 Camellia sinensis var. sinensis HOM05D007927 ORTHO05D010029 1.5e-18 97.8 135 40.7
ClCG02G000450 Citrullus lanatus HOM05D007927 ORTHO05D010029 1.5e-18 97.8 135 40.7
QL10p043457 Quercus lobata HOM05D007927 ORTHO05D010029 2.0e-18 97.4 134 39.6
SEGI_35752 Sequoiadendron giganteum HOM05D007927 ORTHO05D010029 2.0e-18 97.4 135 40.7
CiPaw.04G081700 Carya illinoinensis HOM05D007927 ORTHO05D010029 2.6e-18 97.1 135 40.0
ECA233G3055 Erigeron canadensis HOM05D007927 ORTHO05D010029 2.6e-18 97.1 137 40.1
Lsat_1_v5_gn_5_69000 Lactuca sativa HOM05D007927 ORTHO05D010029 3.4e-18 96.7 148 39.2
CsaV3_2G019410 Cucumis sativus L. HOM05D007927 ORTHO05D010029 4.4e-18 96.3 135 40.0
Hma1.2p1_0476F.1_g160770 Hydrangea macrophylla HOM05D007927 ORTHO05D010029 4.4e-18 96.3 137 40.1
MD01G1005400 Malus domestica HOM05D007927 ORTHO05D010029 4.4e-18 96.3 135 39.3
Dinv24372 Davidia involucrata HOM05D007927 ORTHO05D010029 5.8e-18 95.9 143 39.2
Manes.13G085601 Manihot esculenta HOM05D007927 ORTHO05D010029 5.8e-18 95.9 135 39.3
Ciclev10002360m.g Citrus clementina HOM05D007927 ORTHO05D010029 7.6e-18 95.5 143 38.5
FvH4_1g24440 Fragaria vesca HOM05D007927 ORTHO05D010029 7.6e-18 95.5 135 40.0
FAN19G2953 Fragaria x ananassa HOM05D007927 ORTHO05D010029 7.6e-18 95.5 135 40.0
FAN28G0845 Fragaria x ananassa HOM05D007927 ORTHO05D010029 7.6e-18 95.5 135 40.0
HanXRQChr12g0380561 Helianthus annuus HOM05D007927 ORTHO05D010029 7.6e-18 95.5 137 40.1
Aqoxy5G02324 Aquilegia oxysepala HOM05D007927 ORTHO05D010029 9.9e-18 95.1 135 39.3
Rhsim08G0002700 Rhododendron simsii HOM05D007927 ORTHO05D010029 9.9e-18 95.1 137 39.4
CDE02G1961 Ceratophyllum demersum HOM05D007927 ORTHO05D010029 1.7e-17 94.4 135 39.3
Mapoly0115s0058 Marchantia polymorpha HOM05D007927 ORTHO05D010029 1.7e-17 94.4 140 38.6
TWI75G1488 Tripterygium wilfordii HOM05D007927 ORTHO05D010029 1.7e-17 94.4 135 39.3
Lj4A837T13 Lonicera japonica HOM05D007927 ORTHO05D010029 2.2e-17 94.0 135 39.3
Phvul.002G272300 Phaseolus vulgaris HOM05D007927 ORTHO05D010029 2.2e-17 94.0 135 38.5
VMungo0251G0724 Vigna mungo HOM05D007927 ORTHO05D010029 2.2e-17 94.0 135 38.5
RcHm_v2.0_Chr2g0121541 Rosa chinensis HOM05D007927 ORTHO05D010029 2.9e-17 93.6 135 40.0
COL.COLO4_35756 Corchorus olitorius HOM05D007927 ORTHO05D010029 3.8e-17 93.2 137 37.2
Nn1g06275 Nelumbo nucifera HOM05D007927 ORTHO05D010029 3.8e-17 93.2 135 40.7
TAR628G1503 Trochodendron aralioides HOM05D007927 ORTHO05D010029 3.8e-17 93.2 141 36.9
Atru.chr4.915 Acer truncatum HOM05D007927 ORTHO05D010029 4.9e-17 92.8 135 38.5
GSVIVG01026475001 Vitis vinifera HOM05D007927 ORTHO05D010029 4.9e-17 92.8 135 37.8
Glyma.05G191900 Glycine max HOM05D007927 ORTHO05D010029 6.4e-17 92.4 135 37.8
Actinidia01389 Actinidia chinensis HOM05D007927 ORTHO05D010029 8.4e-17 92.0 135 38.5
Ca_17635_v3 Cicer arietinum L. HOM05D007927 ORTHO05D010029 8.4e-17 92.0 141 36.2
Medtr8g093750 Medicago truncatula HOM05D007927 ORTHO05D010029 8.4e-17 92.0 134 38.1
PGR102G3035 Punica granatum HOM05D007927 ORTHO05D010029 8.4e-17 92.0 137 37.2
Thecc.01G133600 Theobroma cacao HOM05D007927 ORTHO05D010029 8.4e-17 92.0 134 37.3
MBI03_g37385_MAGBIO Magnolia biondii HOM05D007927 ORTHO05D010029 1.1e-16 91.7 137 38.0
MBI03_g42544_MAGBIO Magnolia biondii HOM05D007927 ORTHO05D010029 1.1e-16 91.7 137 38.0
Prupe.4G271700 Prunus persica HOM05D007927 ORTHO05D010029 1.4e-16 91.3 135 37.8
TPR.G37352 Trifolium pratense HOM05D007927 ORTHO05D010029 1.4e-16 91.3 137 36.5
Psat7g045960 Pisum sativum HOM05D007927 ORTHO05D010029 1.9e-16 90.9 134 38.1
Eucgr.J01289 Eucalyptus grandis HOM05D007927 ORTHO05D010029 2.4e-16 90.5 143 37.8
DCAR_014334 Daucus carota HOM05D007927 ORTHO05D010029 3.2e-16 90.1 135 37.8
Gohir.A09G004300 Gossypium hirsutum HOM05D007927 ORTHO05D010029 3.2e-16 90.1 135 37.0
Gohir.D09G003800 Gossypium hirsutum HOM05D007927 ORTHO05D010029 3.2e-16 90.1 135 37.0
Lalb_Chr07g0184391 Lupinus albus HOM05D007927 ORTHO05D010029 3.2e-16 90.1 135 38.5
Duzib264G0901 Durio zibethinus HOM05D007927 ORTHO05D010029 4.1e-16 89.7 135 36.3
Haze_25255 Corylus avellana HOM05D007927 ORTHO05D010029 5.4e-16 89.4 154 35.7
Lj4g0020524 Lotus japonicus HOM05D007927 ORTHO05D010029 1.2e-15 88.2 141 36.9
FAN26G1905 Fragaria x ananassa HOM05D007927 ORTHO05D010029 4.6e-15 86.3 133 38.3
FAN23G1573 Fragaria x ananassa HOM05D007927 ORTHO05D010029 1.3e-14 84.7 124 38.7
Cpa.g.sc42.162 Carica papaya HOM05D007927 ORTHO05D010029 5.1e-14 82.8 128 36.7
Gorai.006G005200 Gossypium raimondii HOM05D007927 ORTHO05D010029 9.6e-13 78.6 121 35.5
Sabra07G0086100 Salix brachista HOM05D007927 ORTHO05D010029 1.6e-12 77.8 98 39.8
MELO3C023232.2 Cucumis melo HOM05D007927 ORTHO05D010029 5.8e-10 69.3 109 37.6
SEGI_09554 Sequoiadendron giganteum HOM05D007927 ORTHO05D010029 3.8e-09 66.6 83 43.4
Lj4C838G8 Lonicera japonica HOM05D007927 ORTHO05D010029 6.0e-07 59.3 65 49.2


User provided reference genes

Program Settings