Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cre01.g048600 Chlamydomonas reinhardtii HOM05D006228 ORTHO05D007847 0.0e+00 2182.1 1257 100.0
AagrBONN_evm.TU.Sc2ySwM_344.5121 Anthoceros agrestis HOM05D006228 ORTHO05D007847 5.1e-28 131.3 276 31.9
Mapoly0014s0032 Marchantia polymorpha HOM05D006228 ORTHO05D007847 3.6e-26 125.2 207 35.7
Pp3c11_8050 Physcomitrium patens HOM05D006228 ORTHO05D007847 1.5e-24 119.8 207 33.8
MCO16G020 Micromonas commoda HOM05D006228 ORTHO05D007847 2.8e-18 99.0 234 29.9
MBI14_g08147_MAGBIO Magnolia biondii HOM05D006228 ORTHO05D007847 3.1e-17 95.5 201 28.9
Lj6g0016911 Lotus japonicus HOM05D006228 ORTHO05D007847 8.9e-17 94.0 201 29.9
ClCG11G010510 Citrullus lanatus HOM05D006228 ORTHO05D007847 2.0e-16 92.8 211 28.9
Dinv34431 Davidia involucrata HOM05D006228 ORTHO05D007847 2.9e-15 89.0 241 27.8
Cc02_g06990 Coffea canephora HOM05D006228 ORTHO05D007847 3.8e-15 88.6 186 29.6
Sed0002982 Sechium edule HOM05D006228 ORTHO05D007847 3.8e-15 88.6 201 29.4
Hma1.2p1_0026F.1_g016930 Hydrangea macrophylla HOM05D006228 ORTHO05D007847 4.9e-15 88.2 186 30.1
Rhsim09G0171700 Rhododendron simsii HOM05D006228 ORTHO05D007847 6.4e-15 87.8 254 26.8
CsaV3_5G008840 Cucumis sativus L. HOM05D006228 ORTHO05D007847 1.4e-14 86.7 186 29.6
CSS0026214 Camellia sinensis var. sinensis HOM05D006228 ORTHO05D007847 2.4e-14 85.9 186 28.5
AUR62012200 Chenopodium quinoa HOM05D006228 ORTHO05D007847 2.4e-14 85.9 201 28.9
C03p26500 Brassica napus HOM05D006228 ORTHO05D007847 5.4e-14 84.7 186 29.0
CAN.G1280.21 Capsicum annuum HOM05D006228 ORTHO05D007847 5.4e-14 84.7 229 26.2
Haze_17175 Corylus avellana HOM05D006228 ORTHO05D007847 7.1e-14 84.3 241 26.6
CSS0000174 Camellia sinensis var. sinensis HOM05D006228 ORTHO05D007847 9.3e-14 84.0 186 28.0
Cfa005508 Carpinus fangiana HOM05D006228 ORTHO05D007847 2.1e-13 82.8 186 28.5
MD07G1212900 Malus domestica HOM05D006228 ORTHO05D007847 3.5e-13 82.0 186 26.3
AUR62022833 Chenopodium quinoa HOM05D006228 ORTHO05D007847 7.8e-13 80.9 194 28.9
Prupe.2G245100 Prunus persica HOM05D006228 ORTHO05D007847 7.8e-13 80.9 185 25.9
Actinidia13913 Actinidia chinensis HOM05D006228 ORTHO05D007847 1.3e-12 80.1 245 24.5
CARHR134830 Cardamine hirsuta HOM05D006228 ORTHO05D007847 3.0e-12 79.0 186 26.9
PGSC0003DMG400007303 Solanum tuberosum HOM05D006228 ORTHO05D007847 3.0e-12 79.0 221 25.3
RcHm_v2.0_Chr1g0369221 Rosa chinensis HOM05D006228 ORTHO05D007847 3.9e-12 78.6 186 26.9
Sopen06g004350 Solanum pennellii HOM05D006228 ORTHO05D007847 3.9e-12 78.6 221 25.3
Aqoxy1G00736 Aquilegia oxysepala HOM05D006228 ORTHO05D007847 6.6e-12 77.8 198 26.3
Aqoxy3G00589 Aquilegia oxysepala HOM05D006228 ORTHO05D007847 1.1e-11 77.0 198 26.3
Solyc06g009690.3 Solanum lycopersicum HOM05D006228 ORTHO05D007847 1.1e-11 77.0 221 24.9
Nn2g13585 Nelumbo nucifera HOM05D006228 ORTHO05D007847 4.3e-11 75.1 186 25.3
PSO384G3635 Papaver somniferum HOM05D006228 ORTHO05D007847 3.6e-10 72.0 241 23.2
Nitab4.5_0000278g0180 Nicotiana tabacum HOM05D006228 ORTHO05D007847 2.4e-09 69.3 202 26.7
HanXRQChr09g0246891 Helianthus annuus HOM05D006228 ORTHO05D007847 3.1e-09 68.9 186 25.3
MELO3C025144.2 Cucumis melo HOM05D006228 ORTHO05D007847 2.0e-08 66.2 221 25.8
Peaxi162Scf00401g00030 Petunia axillaris HOM05D006228 ORTHO05D007847 1.3e-07 63.5 186 25.3
PSO585G0034 Papaver somniferum HOM05D006228 ORTHO05D007847 1.7e-07 63.2 244 23.0
PGR044G0451 Punica granatum HOM05D006228 ORTHO05D007847 1.1e-06 60.5 134 26.9


User provided reference genes

Program Settings