Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cre01.g043200 Chlamydomonas reinhardtii HOM05D007518 ORTHO05D008168 6.9e-49 197.6 151 100.0
Pp3c15_7720 Physcomitrium patens HOM05D007518 ORTHO05D008168 8.5e-15 84.3 121 70.2
Mapoly0168s0019 Marchantia polymorpha HOM05D007518 ORTHO05D008168 1.0e-12 77.4 92 50.0
Haze_15107 Corylus avellana HOM05D007518 ORTHO05D008168 1.4e-12 77.0 59 66.1
Lj2g0015504 Lotus japonicus HOM05D007518 ORTHO05D008168 3.0e-12 75.9 71 57.7
COL.COLO4_22099 Corchorus olitorius HOM05D007518 ORTHO05D008168 8.8e-12 74.3 87 50.6
Gohir.A02G164600 Gossypium hirsutum HOM05D007518 ORTHO05D008168 8.8e-12 74.3 65 60.0
Gohir.D03G015500 Gossypium hirsutum HOM05D007518 ORTHO05D008168 2.6e-11 72.8 113 69.9
Gorai.003G015700 Gossypium raimondii HOM05D007518 ORTHO05D008168 2.6e-11 72.8 113 69.9
TPR.G28676 Trifolium pratense HOM05D007518 ORTHO05D008168 2.6e-11 72.8 65 55.4
Sed0026205 Sechium edule HOM05D007518 ORTHO05D008168 7.5e-11 71.2 92 45.7
Ah.03g139360 Amaranthus hybridus HOM05D007518 ORTHO05D008168 1.3e-10 70.5 61 57.4
CiPaw.02G016200 Carya illinoinensis HOM05D007518 ORTHO05D008168 1.7e-10 70.1 59 61.0
Duzib187G0536 Durio zibethinus HOM05D007518 ORTHO05D008168 1.7e-10 70.1 65 56.9
MD15G1264900 Malus domestica HOM05D007518 ORTHO05D008168 1.7e-10 70.1 59 61.0
MBI16_g37747_MAGBIO Magnolia biondii HOM05D007518 ORTHO05D008168 2.2e-10 69.7 59 55.9
Psat2g160680 Pisum sativum HOM05D007518 ORTHO05D008168 2.2e-10 69.7 68 52.9
Glyma.11G067100 Glycine max HOM05D007518 ORTHO05D008168 2.8e-10 69.3 58 62.1
Lsat_1_v5_gn_3_78660 Lactuca sativa HOM05D007518 ORTHO05D008168 2.8e-10 69.3 71 57.7
MD02G1150400 Malus domestica HOM05D007518 ORTHO05D008168 2.8e-10 69.3 59 57.6
Phvul.002G029100 Phaseolus vulgaris HOM05D007518 ORTHO05D008168 3.7e-10 68.9 63 55.6
TWI53G0381 Tripterygium wilfordii HOM05D007518 ORTHO05D008168 3.7e-10 68.9 68 54.4
Ca_00386_v3 Cicer arietinum L. HOM05D007518 ORTHO05D008168 4.8e-10 68.6 61 57.4
PSO675G1394 Papaver somniferum HOM05D007518 ORTHO05D008168 4.8e-10 68.6 64 59.4
Lalb_Chr09g0322501 Lupinus albus HOM05D007518 ORTHO05D008168 6.3e-10 68.2 77 50.6
arahy.Tifrunner.gnm1.ann1.RRU65L Arachis hypogaea HOM05D007518 ORTHO05D008168 8.2e-10 67.8 90 47.8
CSS0014655 Camellia sinensis var. sinensis HOM05D007518 ORTHO05D008168 8.2e-10 67.8 65 56.9
Cfa004294 Carpinus fangiana HOM05D007518 ORTHO05D008168 8.2e-10 67.8 59 61.0
Ciclev10026615m.g Citrus clementina HOM05D007518 ORTHO05D008168 8.2e-10 67.8 52 63.5
CsaV3_6G046170 Cucumis sativus L. HOM05D007518 ORTHO05D008168 8.2e-10 67.8 86 48.8
PGR119G2546 Punica granatum HOM05D007518 ORTHO05D008168 8.2e-10 67.8 65 53.8
Cfa004293 Carpinus fangiana HOM05D007518 ORTHO05D008168 1.1e-09 67.4 62 58.1
MELO3C007820.2 Cucumis melo HOM05D007518 ORTHO05D008168 1.1e-09 67.4 92 46.7
FvH4_1g13510 Fragaria vesca HOM05D007518 ORTHO05D008168 1.1e-09 67.4 59 57.6
FAN19G2612 Fragaria x ananassa HOM05D007518 ORTHO05D008168 1.1e-09 67.4 59 57.6
FAN28G1656 Fragaria x ananassa HOM05D007518 ORTHO05D008168 1.1e-09 67.4 59 57.6
HanXRQChr16g0530261 Helianthus annuus HOM05D007518 ORTHO05D008168 1.1e-09 67.4 69 55.1
arahy.Tifrunner.gnm1.ann1.5UMV3I Arachis hypogaea HOM05D007518 ORTHO05D008168 1.4e-09 67.0 90 46.7
RcHm_v2.0_Chr2g0101891 Rosa chinensis HOM05D007518 ORTHO05D008168 1.4e-09 67.0 59 57.6
Aa31LG4G18840 Aethionema arabicum HOM05D007518 ORTHO05D008168 1.8e-09 66.6 72 52.8
Manes.01G134000 Manihot esculenta HOM05D007518 ORTHO05D008168 1.8e-09 66.6 65 53.8
Prupe.7G152700 Prunus persica HOM05D007518 ORTHO05D008168 1.8e-09 66.6 63 57.1
A06p05270 Brassica napus HOM05D007518 ORTHO05D008168 2.4e-09 66.2 47 68.1
BraA06t23735Z Brassica rapa HOM05D007518 ORTHO05D008168 2.4e-09 66.2 47 68.1
CAN.G1028.6 Capsicum annuum HOM05D007518 ORTHO05D008168 2.4e-09 66.2 94 76.6
ECA246G0481 Erigeron canadensis HOM05D000085 ORTHO05D000274 2.4e-09 66.2 63 54.0
Eucgr.I02457 Eucalyptus grandis HOM05D007518 ORTHO05D008168 2.4e-09 66.2 103 43.7
Actinidia12117 Actinidia chinensis HOM05D007518 ORTHO05D008168 3.1e-09 65.9 65 55.4
Solyc03g034070.1 Solanum lycopersicum HOM05D007518 ORTHO05D008168 3.1e-09 65.9 94 76.6
Sopen03g006850 Solanum pennellii HOM05D007518 ORTHO05D008168 3.1e-09 65.9 94 76.6
VMungo1215G2461 Vigna mungo HOM05D007518 ORTHO05D008168 3.1e-09 65.9 90 45.6
AUR62007988 Chenopodium quinoa HOM05D006571 ORTHO05D007771 4.1e-09 65.5 62 54.8
Thhalv10010782m.g Eutrema salsugineum HOM05D007518 ORTHO05D008168 4.1e-09 65.5 72 52.8
DCAR_021444 Daucus carota HOM05D007518 ORTHO05D008168 5.3e-09 65.1 81 46.9
Lj2P450T11 Lonicera japonica HOM05D007518 ORTHO05D008168 5.3e-09 65.1 46 65.2
Medtr5g019920 Medicago truncatula HOM05D007518 ORTHO05D008168 5.3e-09 65.1 68 50.0
Thecc.01G037800 Theobroma cacao HOM05D007518 ORTHO05D008168 5.3e-09 65.1 87 47.1
Migut.L00282 Erythranthe guttata HOM05D007518 ORTHO05D008168 7.0e-09 64.7 77 50.6
PSO541G1957 Papaver somniferum HOM05D007518 ORTHO05D008168 7.0e-09 64.7 78 52.6
PRCOL_00004191 Prasinoderma coloniale HOM05D007518 ORTHO05D008168 7.0e-09 64.7 67 50.7
THA.LOC104821280 Tarenaya hassleriana HOM05D007518 ORTHO05D008168 7.0e-09 64.7 134 62.7
Atru.chr3.555 Acer truncatum HOM05D007518 ORTHO05D008168 9.1e-09 64.3 67 50.7
AL5G30840 Arabidopsis lyrata HOM05D007518 ORTHO05D008168 9.1e-09 64.3 57 57.9
BcaB07g34065 Brassica carinata HOM05D007518 ORTHO05D008168 9.1e-09 64.3 72 51.4
Nn1g05049 Nelumbo nucifera HOM05D007518 ORTHO05D008168 1.2e-08 63.9 71 52.1
QL06p045656 Quercus lobata HOM05D007518 ORTHO05D008168 1.2e-08 63.9 61 54.1
TAR628G0256 Trochodendron aralioides HOM05D007518 ORTHO05D008168 1.2e-08 63.9 72 50.0
C05p06340 Brassica napus HOM05D007518 ORTHO05D008168 1.6e-08 63.5 69 53.6
CANSAT01G2215 Cannabis sativa HOM05D007518 ORTHO05D008168 1.6e-08 63.5 73 50.7
Sabra07G0023900 Salix brachista HOM05D007518 ORTHO05D008168 1.6e-08 63.5 65 50.8
SEGI_19868 Sequoiadendron giganteum HOM05D007518 ORTHO05D008168 1.6e-08 63.5 49 63.3
unitig_62.g23458 Utricularia gibba HOM05D007518 ORTHO05D008168 1.6e-08 63.5 59 59.3
Aqoxy6G01075 Aquilegia oxysepala HOM05D007518 ORTHO05D008168 2.0e-08 63.2 65 50.8
BolC5t29390H Brassica oleracea HOM05D007518 ORTHO05D008168 2.7e-08 62.8 69 53.6
Rhsim10G0067800 Rhododendron simsii HOM05D007518 ORTHO05D008168 2.7e-08 62.8 79 46.8
Cc07_g09360 Coffea canephora HOM05D007518 ORTHO05D008168 3.5e-08 62.4 82 46.3
Nitab4.5_0016476g0010 Nicotiana tabacum HOM05D007518 ORTHO05D008168 3.5e-08 62.4 44 65.9
Sp5g11540 Schrenkiella parvula HOM05D007518 ORTHO05D008168 3.5e-08 62.4 72 52.8
ATR0733G025 Amborella trichopoda HOM05D007518 ORTHO05D008168 7.7e-08 61.2 56 58.9
AUR62003171 Chenopodium quinoa HOM05D007518 ORTHO05D008168 7.7e-08 61.2 91 41.8
CBR_g37409 Chara braunii HOM05D007518 ORTHO05D008168 1.0e-07 60.8 82 48.8
SMO361G0359 Selaginella moellendorffii HOM05D007518 ORTHO05D008168 1.0e-07 60.8 47 61.7
Carub.0005s1701 Capsella rubella HOM05D007518 ORTHO05D008168 1.3e-07 60.5 73 47.9
Oeu007443.1 Olea europaea HOM05D007518 ORTHO05D008168 1.7e-07 60.1 66 48.5
AT3G50685 Arabidopsis thaliana HOM05D007518 ORTHO05D008168 2.2e-07 59.7 65 52.3
Sc03g0000780 Simmondsia chinensis HOM05D007518 ORTHO05D008168 2.2e-07 59.7 73 52.1
Potri.007G027400 Populus trichocarpa HOM05D007518 ORTHO05D008168 2.9e-07 59.3 55 54.5
Dinv26823 Davidia involucrata HOM05D002420 ORTHO05D002422 3.8e-07 58.9 42 64.3
SGA_v2.0_scaffold248G44914 Striga asiatica HOM05D007518 ORTHO05D008168 5.0e-07 58.5 63 50.8
CARHR160200 Cardamine hirsuta HOM05D007518 ORTHO05D008168 1.9e-06 56.6 68 48.5
MCO12G314 Micromonas commoda HOM05D007518 ORTHO05D008168 4.2e-06 55.5 66 50.0
Nitab4.5_0001038g0130 Nicotiana tabacum HOM05D007518 ORTHO05D008168 4.2e-06 55.5 40 62.5
AagrBONN_evm.TU.Sc2ySwM_228.2926 Anthoceros agrestis HOM05D007518 ORTHO05D008168 5.5e-06 55.1 48 60.4
PGSC0003DMG400017778 Solanum tuberosum HOM05D007518 ORTHO05D008168 7.2e-06 54.7 130 56.9


User provided reference genes

Program Settings