Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cre01.g041351 Chlamydomonas reinhardtii HOM05D007563 ORTHO05D009546 1.6e-112 409.8 273 100.0
PGSC0003DMG400016398 Solanum tuberosum HOM05D007563 ORTHO05D009546 1.3e-26 124.4 140 45.0
Zm00001eb248280 Zea mays HOM05D007563 ORTHO05D009546 1.8e-26 124.0 213 40.8
Sopen01g003780 Solanum pennellii HOM05D007563 ORTHO05D009546 3.9e-26 122.9 140 44.3
Os02g0635700 Oryza sativa ssp. japonica HOM05D007563 ORTHO05D009546 5.1e-26 122.5 141 47.5
MSTRG.8089 Avicennia marina HOM05D007563 ORTHO05D009546 1.9e-25 120.6 143 45.5
PGR044G2202 Punica granatum HOM05D007563 ORTHO05D009546 2.5e-25 120.2 136 45.6
Solyc01g008260.4 Solanum lycopersicum HOM05D007563 ORTHO05D009546 2.5e-25 120.2 140 43.6
Thecc.02G156900 Theobroma cacao HOM05D007563 ORTHO05D009546 2.5e-25 120.2 142 43.7
CAN.G282.47 Capsicum annuum HOM05D007563 ORTHO05D009546 4.3e-25 119.4 137 43.8
Nitab4.5_0000069g0150 Nicotiana tabacum HOM05D007563 ORTHO05D009546 5.6e-25 119.0 136 41.9
Prupe.1G070600 Prunus persica HOM05D007563 ORTHO05D009546 5.6e-25 119.0 142 45.1
VMungo0720G1614 Vigna mungo HOM05D007563 ORTHO05D009546 9.6e-25 118.2 136 43.4
Lalb_Chr06g0163901 Lupinus albus HOM05D007563 ORTHO05D009546 2.1e-24 117.1 140 43.6
COL.COLO4_33083 Corchorus olitorius HOM05D007563 ORTHO05D009546 2.8e-24 116.7 140 42.9
RcHm_v2.0_Chr4g0398681 Rosa chinensis HOM05D007563 ORTHO05D009546 3.7e-24 116.3 140 42.9
TWI53G1187 Tripterygium wilfordii HOM05D007563 ORTHO05D009546 3.7e-24 116.3 136 43.4
GSVIVG01026146001 Vitis vinifera HOM05D007563 ORTHO05D009546 3.7e-24 116.3 141 41.8
Hund24382 Selenicereus undatus HOM05D007563 ORTHO05D009546 6.2e-24 115.5 136 43.4
CSS0014548 Camellia sinensis var. sinensis HOM05D007563 ORTHO05D009546 8.1e-24 115.2 136 42.6
Eucgr.J00882 Eucalyptus grandis HOM05D007563 ORTHO05D009546 8.1e-24 115.2 136 42.6
THA.LOC104818377 Tarenaya hassleriana HOM05D007563 ORTHO05D009546 8.1e-24 115.2 137 43.8
arahy.Tifrunner.gnm1.ann1.B4R3WF Arachis hypogaea HOM05D007563 ORTHO05D009546 1.1e-23 114.8 136 42.6
Duzib248G0691 Durio zibethinus HOM05D007563 ORTHO05D009546 1.1e-23 114.8 142 41.5
Gohir.D13G060600 Gossypium hirsutum HOM05D007563 ORTHO05D009546 1.1e-23 114.8 143 41.3
BraA02t04951Z Brassica rapa HOM05D007563 ORTHO05D009546 1.4e-23 114.4 140 41.4
Gohir.A13G061300 Gossypium hirsutum HOM05D007563 ORTHO05D009546 1.4e-23 114.4 143 41.3
MBI03_g13825_MAGBIO Magnolia biondii HOM05D007563 ORTHO05D009546 1.4e-23 114.4 133 42.1
arahy.Tifrunner.gnm1.ann1.02I6X5 Arachis hypogaea HOM05D007563 ORTHO05D009546 1.8e-23 114.0 136 41.9
Gorai.013G068700 Gossypium raimondii HOM05D007563 ORTHO05D009546 1.8e-23 114.0 143 41.3
Nitab4.5_0002387g0070 Nicotiana tabacum HOM05D007563 ORTHO05D009546 1.8e-23 114.0 137 41.6
TAR622G0982 Trochodendron aralioides HOM05D007563 ORTHO05D009546 1.8e-23 114.0 137 43.1
FAN12G1059 Fragaria x ananassa HOM05D007563 ORTHO05D009546 3.1e-23 113.2 140 42.9
Peaxi162Scf00021g02222 Petunia axillaris HOM05D007563 ORTHO05D009546 3.1e-23 113.2 140 42.9
SMO201G0195 Selaginella moellendorffii HOM05D007563 ORTHO05D009546 3.1e-23 113.2 139 46.8
CANSAT78G0704 Cannabis sativa HOM05D007563 ORTHO05D009546 5.3e-23 112.5 144 41.7
unitig_22.g6356 Utricularia gibba HOM05D007563 ORTHO05D009546 5.3e-23 112.5 145 43.4
BolC2t06312H Brassica oleracea HOM05D007563 ORTHO05D009546 6.9e-23 112.1 140 40.7
Cfa008765 Carpinus fangiana HOM05D007563 ORTHO05D009546 6.9e-23 112.1 137 40.9
Ciclev10032938m.g Citrus clementina HOM05D007563 ORTHO05D009546 6.9e-23 112.1 136 43.4
DCAR_026884 Daucus carota HOM05D007563 ORTHO05D009546 6.9e-23 112.1 133 39.8
C02p03530 Brassica napus HOM05D007563 ORTHO05D009546 9.0e-23 111.7 140 40.7
Glyma.10G285700 Glycine max HOM05D007563 ORTHO05D009546 9.0e-23 111.7 136 41.9
MD16G1243400 Malus domestica HOM05D007563 ORTHO05D009546 9.0e-23 111.7 140 43.6
QL03p034961 Quercus lobata HOM05D007563 ORTHO05D009546 9.0e-23 111.7 135 40.7
Aa31LG3G18250 Aethionema arabicum HOM05D007563 ORTHO05D009546 1.5e-22 110.9 137 40.9
FvH4_4g06750 Fragaria vesca HOM05D007563 ORTHO05D009546 1.5e-22 110.9 140 42.1
Nn3g18621 Nelumbo nucifera HOM05D007563 ORTHO05D009546 2.0e-22 110.5 145 40.7
SEGI_01872 Sequoiadendron giganteum HOM05D007563 ORTHO05D009546 2.0e-22 110.5 138 42.8
vmacro15986 Vaccinium macrocarpon HOM05D007563 ORTHO05D009546 2.0e-22 110.5 136 41.9
Carub.0006s0721 Capsella rubella HOM05D007563 ORTHO05D009546 3.4e-22 109.8 140 40.0
Hma1.2p1_0513F.1_g169460 Hydrangea macrophylla HOM05D007563 ORTHO05D009546 3.4e-22 109.8 140 42.9
Mapoly0067s0084 Marchantia polymorpha HOM05D007563 ORTHO05D009546 3.4e-22 109.8 136 43.4
PSO478G0646 Papaver somniferum HOM05D007563 ORTHO05D009546 3.4e-22 109.8 136 42.6
ATR0618G415 Amborella trichopoda HOM05D007563 ORTHO05D009546 5.8e-22 109.0 134 41.0
CARHR204780 Cardamine hirsuta HOM05D007563 ORTHO05D009546 5.8e-22 109.0 140 42.1
Thhalv10014924m.g Eutrema salsugineum HOM05D007563 ORTHO05D009546 5.8e-22 109.0 140 42.1
AL6G18750 Arabidopsis lyrata HOM05D007563 ORTHO05D009546 1.0e-21 108.2 140 40.0
HanXRQChr16g0528531 Helianthus annuus HOM05D007563 ORTHO05D009546 1.0e-21 108.2 136 43.4
Lj3A848G48 Lonicera japonica HOM05D007563 ORTHO05D009546 1.0e-21 108.2 140 42.1
Potri.005G090400 Populus trichocarpa HOM05D007563 ORTHO05D009546 1.0e-21 108.2 136 39.7
HPP92_005058 Vanilla planifolia HOM05D007563 ORTHO05D009546 1.3e-21 107.8 136 41.2
ECA234G0294 Erigeron canadensis HOM05D007563 ORTHO05D009546 1.7e-21 107.5 141 40.4
Lsat_1_v5_gn_4_64620 Lactuca sativa HOM05D007563 ORTHO05D009546 1.7e-21 107.5 142 40.1
PSO017G0076 Papaver somniferum HOM05D007563 ORTHO05D009546 1.7e-21 107.5 136 40.4
Psat6g233640 Pisum sativum HOM05D007563 ORTHO05D009546 1.7e-21 107.5 138 39.9
Lj5g0022450 Lotus japonicus HOM05D007563 ORTHO05D009546 2.2e-21 107.1 136 40.4
Sc21g0003780 Simmondsia chinensis HOM05D007563 ORTHO05D009546 2.2e-21 107.1 140 41.4
CDE04G1527 Ceratophyllum demersum HOM05D007563 ORTHO05D009546 3.8e-21 106.3 136 41.2
AUR62017724 Chenopodium quinoa HOM05D007563 ORTHO05D009546 3.8e-21 106.3 141 41.8
Medtr1g114370 Medicago truncatula HOM05D007563 ORTHO05D009546 3.8e-21 106.3 137 40.9
Phvul.007G015100 Phaseolus vulgaris HOM05D007563 ORTHO05D009546 3.8e-21 106.3 133 39.8
AT5G08320 Arabidopsis thaliana HOM05D007563 ORTHO05D009546 4.9e-21 105.9 140 39.3
Rhsim09G0069800 Rhododendron simsii HOM05D007563 ORTHO05D009546 6.5e-21 105.5 140 40.0
TPR.G4067 Trifolium pratense HOM05D007563 ORTHO05D009546 1.1e-20 104.8 136 39.0
Sp6g34630 Schrenkiella parvula HOM05D007563 ORTHO05D009546 1.4e-20 104.4 141 39.0
Oeu013196.2 Olea europaea HOM05D007563 ORTHO05D009546 1.9e-20 104.0 167 36.5
Ca_11254_v3 Cicer arietinum L. HOM05D007563 ORTHO05D009546 2.5e-20 103.6 136 38.2
Atru.chr11.1116 Acer truncatum HOM05D007563 ORTHO05D009546 5.5e-20 102.4 142 39.4
AUR62032956 Chenopodium quinoa HOM05D007563 ORTHO05D009546 2.1e-19 100.5 136 41.9
EL10Ac9g22975 Beta vulgaris HOM05D007563 ORTHO05D009546 7.9e-19 98.6 136 39.0
Pp3c13_24580 Physcomitrium patens HOM05D007563 ORTHO05D009546 7.9e-19 98.6 150 38.7
Aqoxy2G00835 Aquilegia oxysepala HOM05D007563 ORTHO05D009546 1.3e-18 97.8 136 37.5
Nitab4.5_0000069g0170 Nicotiana tabacum HOM05D007563 ORTHO05D009546 1.3e-18 97.8 136 37.5
BcaC03g13222 Brassica carinata HOM05D007563 ORTHO05D009546 1.1e-17 94.7 125 39.2
AagrBONN_evm.TU.Sc2ySwM_368.3197 Anthoceros agrestis HOM05D007563 ORTHO05D009546 7.4e-17 92.0 66 63.6
CiPaw.05G170900 Carya illinoinensis HOM05D007563 ORTHO05D009546 2.1e-16 90.5 118 40.7
Haze_11776 Corylus avellana HOM05D007563 ORTHO05D009546 1.4e-15 87.8 188 29.8
MCO14G254 Micromonas commoda HOM05D007563 ORTHO05D009546 4.5e-14 82.8 66 56.1
Sabra05G0074500 Salix brachista HOM05D007563 ORTHO05D009546 5.1e-10 69.3 133 29.3
PRCOL_00006925 Prasinoderma coloniale HOM05D007563 ORTHO05D009546 2.5e-09 67.0 119 33.6
Cc00_g07880 Coffea canephora HOM05D007563 ORTHO05D009546 4.8e-08 62.8 41 61.0
CBR_g24157 Chara braunii HOM05D007563 ORTHO05D009546 2.4e-07 60.5 117 37.6
Migut.L00866 Erythranthe guttata HOM05D007563 ORTHO05D009546 4.1e-07 59.7 103 34.0


User provided reference genes

Program Settings