Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cre01.g041300 Chlamydomonas reinhardtii HOM05D005843 ORTHO05D007781 3.8e-248 861.3 517 100.0
MD12G1140900 Malus domestica HOM05D005843 ORTHO05D007781 1.0e-59 235.3 532 32.0
MD04G1127500 Malus domestica HOM05D005843 ORTHO05D007781 4.3e-58 229.9 529 32.1
TWI38G1602 Tripterygium wilfordii HOM05D005843 ORTHO05D007781 5.6e-58 229.6 538 32.2
Nn8g39667 Nelumbo nucifera HOM05D005843 ORTHO05D007781 7.3e-58 229.2 541 32.3
TAR633G1568 Trochodendron aralioides HOM05D005843 ORTHO05D007781 2.1e-57 227.6 545 31.7
Rhsim05G0192300 Rhododendron simsii HOM05D005843 ORTHO05D007781 3.6e-57 226.9 540 30.7
EL10Ac3g07255 Beta vulgaris HOM05D005843 ORTHO05D007781 1.1e-56 225.3 538 32.2
CsaV3_4G024980 Cucumis sativus L. HOM05D005843 ORTHO05D007781 1.1e-56 225.3 535 31.0
MELO3C003129.2 Cucumis melo HOM05D005843 ORTHO05D007781 2.4e-56 224.2 536 31.5
Gorai.006G173000 Gossypium raimondii HOM05D005843 ORTHO05D007781 2.4e-56 224.2 533 32.6
Gohir.D09G151700 Gossypium hirsutum HOM05D005843 ORTHO05D007781 4.0e-56 223.4 533 32.5
RcHm_v2.0_Chr3g0466751 Rosa chinensis HOM05D005843 ORTHO05D007781 4.0e-56 223.4 532 31.8
Gohir.A09G156300 Gossypium hirsutum HOM05D005843 ORTHO05D007781 5.3e-56 223.0 533 32.3
PGR004G0455 Punica granatum HOM05D005843 ORTHO05D007781 6.9e-56 222.6 535 32.1
CiPaw.09G192200 Carya illinoinensis HOM05D005843 ORTHO05D007781 9.0e-56 222.2 536 31.2
Prupe.6G254200 Prunus persica HOM05D005843 ORTHO05D007781 1.2e-55 221.9 540 32.2
Atru.chr8.1969 Acer truncatum HOM05D005843 ORTHO05D007781 1.5e-55 221.5 549 32.6
QL06p005681 Quercus lobata HOM05D005843 ORTHO05D007781 2.0e-55 221.1 535 32.3
Thecc.05G040300 Theobroma cacao HOM05D005843 ORTHO05D007781 2.0e-55 221.1 535 32.7
Solyc09g010770.3 Solanum lycopersicum HOM05D005843 ORTHO05D007781 2.6e-55 220.7 520 31.2
DCAR_014847 Daucus carota HOM05D005843 ORTHO05D007781 4.4e-55 219.9 542 31.2
FAN14G2296 Fragaria x ananassa HOM05D005843 ORTHO05D007781 4.4e-55 219.9 532 31.6
Haze_20785 Corylus avellana HOM05D005843 ORTHO05D007781 5.8e-55 219.5 554 31.2
Sopen09g005490 Solanum pennellii HOM05D005843 ORTHO05D007781 1.3e-54 218.4 535 30.5
Lalb_Chr19g0125371 Lupinus albus HOM05D005843 ORTHO05D007781 2.2e-54 217.6 541 30.7
Duzib128G1977 Durio zibethinus HOM05D005843 ORTHO05D007781 3.8e-54 216.9 557 32.1
FAN05G5617 Fragaria x ananassa HOM05D005843 ORTHO05D007781 3.8e-54 216.9 539 32.1
Nitab4.5_0001190g0070 Nicotiana tabacum HOM05D005843 ORTHO05D007781 3.8e-54 216.9 535 30.8
Medtr7g060680 Medicago truncatula HOM05D005843 ORTHO05D007781 4.9e-54 216.5 542 31.2
GSVIVG01034179001 Vitis vinifera HOM05D005843 ORTHO05D007781 4.9e-54 216.5 545 31.7
arahy.Tifrunner.gnm1.ann1.JAB43P Arachis hypogaea HOM05D005843 ORTHO05D007781 6.4e-54 216.1 538 30.9
CAN.G326.14 Capsicum annuum HOM05D005843 ORTHO05D007781 1.1e-53 215.3 535 30.3
Hund24578 Selenicereus undatus HOM05D005843 ORTHO05D007781 1.1e-53 215.3 536 31.2
Psat5g101400 Pisum sativum HOM05D005843 ORTHO05D007781 1.4e-53 214.9 541 30.9
PGSC0003DMG400008911 Solanum tuberosum HOM05D005843 ORTHO05D007781 1.4e-53 214.9 535 30.1
HPP92_000805 Vanilla planifolia HOM05D005843 ORTHO05D007781 1.4e-53 214.9 542 30.6
BcaC06g31988 Brassica carinata HOM05D005843 ORTHO05D007781 1.9e-53 214.5 539 31.7
Ca_26026_v3 Cicer arietinum L. HOM05D005843 ORTHO05D007781 1.9e-53 214.5 542 31.0
Cpa.g.sc332.7 Carica papaya HOM05D005843 ORTHO05D007781 2.4e-53 214.2 542 31.5
ECA238G1173 Erigeron canadensis HOM05D005843 ORTHO05D007781 3.2e-53 213.8 533 31.1
Sc20g0004950 Simmondsia chinensis HOM05D005843 ORTHO05D007781 3.2e-53 213.8 535 31.8
THA.LOC104809903 Tarenaya hassleriana HOM05D005843 ORTHO05D007781 3.2e-53 213.8 530 30.9
Manes.17G047400 Manihot esculenta HOM05D005843 ORTHO05D007781 4.2e-53 213.4 541 31.6
Oeu024347.1 Olea europaea HOM05D005843 ORTHO05D007781 4.2e-53 213.4 535 30.1
BolC9t60149H Brassica oleracea HOM05D005843 ORTHO05D007781 5.4e-53 213.0 534 30.9
Cc06_g02690 Coffea canephora HOM05D005843 ORTHO05D007781 7.1e-53 212.6 534 31.6
PSO339G2649 Papaver somniferum HOM05D005843 ORTHO05D007781 9.3e-53 212.2 546 31.1
SalBow3G1829 Salvia bowleyana HOM05D005843 ORTHO05D007781 1.6e-52 211.5 523 31.0
Glyma.07G131100 Glycine max HOM05D005843 ORTHO05D007781 2.1e-52 211.1 540 30.7
SGA_v2.0_scaffold75G24948 Striga asiatica HOM05D005843 ORTHO05D007781 2.7e-52 210.7 537 31.1
A10p33250 Brassica napus HOM05D005843 ORTHO05D007781 3.5e-52 210.3 535 30.8
Eucgr.K03141 Eucalyptus grandis HOM05D005843 ORTHO05D007781 3.5e-52 210.3 533 30.0
Sed0019468 Sechium edule HOM05D005843 ORTHO05D007781 3.5e-52 210.3 526 31.2
Aqoxy6G01388 Aquilegia oxysepala HOM05D005843 ORTHO05D007781 4.6e-52 209.9 537 31.3
ClCG04G008190 Citrullus lanatus HOM05D005843 ORTHO05D007781 6.0e-52 209.5 535 29.9
PSO151G0180 Papaver somniferum HOM05D005843 ORTHO05D007781 6.0e-52 209.5 546 31.1
BcaNung02129 Brassica carinata HOM05D005843 ORTHO05D007781 1.0e-51 208.8 532 30.6
TPR.G23290 Trifolium pratense HOM05D005843 ORTHO05D007781 1.0e-51 208.8 539 30.1
Peaxi162Scf00165g01322 Petunia axillaris HOM05D005843 ORTHO05D007781 3.0e-51 207.2 568 29.9
Sp6g40070 Schrenkiella parvula HOM05D005843 ORTHO05D007781 3.0e-51 207.2 529 30.6
Migut.J00332 Erythranthe guttata HOM05D005843 ORTHO05D007781 3.9e-51 206.8 541 30.3
BcaNung05922 Brassica carinata HOM05D005843 ORTHO05D007781 5.1e-51 206.5 532 30.6
Carub.0006s0120 Capsella rubella HOM05D005843 ORTHO05D007781 5.1e-51 206.5 547 31.1
AL6G11640 Arabidopsis lyrata HOM05D005843 ORTHO05D007781 6.6e-51 206.1 550 30.9
A03p00670 Brassica napus HOM05D005843 ORTHO05D007781 6.6e-51 206.1 533 30.6
SMO137G0039 Selaginella moellendorffii HOM05D005843 ORTHO05D007781 8.7e-51 205.7 530 30.9
Hma1.2p1_1513F.1_g288040 Hydrangea macrophylla HOM05D005843 ORTHO05D007781 1.1e-50 205.3 537 31.5
Phvul.008G100900 Phaseolus vulgaris HOM05D005843 ORTHO05D007781 2.5e-50 204.1 539 30.2
Pp3c4_12410 Physcomitrium patens HOM05D005843 ORTHO05D007781 4.3e-50 203.4 540 31.1
Thhalv10013300m.g Eutrema salsugineum HOM05D005843 ORTHO05D007781 9.6e-50 202.2 549 29.1
C09p74160 Brassica napus HOM05D005843 ORTHO05D007781 2.1e-49 201.1 486 31.5
VMungo1383G2898 Vigna mungo HOM05D005843 ORTHO05D007781 2.1e-49 201.1 537 29.1
HanXRQChr16g0515781 Helianthus annuus HOM05D005843 ORTHO05D007781 2.8e-49 200.7 533 29.8
Lj3C968G10 Lonicera japonica HOM05D005843 ORTHO05D007781 3.6e-49 200.3 584 30.5
CANSAT35G1785 Cannabis sativa HOM05D005843 ORTHO05D007781 6.2e-49 199.5 547 30.7
CARHR211000 Cardamine hirsuta HOM05D005843 ORTHO05D007781 6.2e-49 199.5 534 29.4
FAN09G3893 Fragaria x ananassa HOM05D005843 ORTHO05D007781 6.2e-49 199.5 567 29.8
SHI00339 Sapria himalayana HOM05D005843 ORTHO05D007781 6.2e-49 199.5 547 31.1
Actinidia26464 Actinidia chinensis HOM05D005843 ORTHO05D000250 1.1e-48 198.7 480 32.3
AT5G02410 Arabidopsis thaliana HOM05D005843 ORTHO05D007781 1.8e-48 198.0 534 30.0
Lsat_1_v5_gn_2_17401 Lactuca sativa HOM05D005843 ORTHO05D007781 1.8e-48 198.0 506 30.4
QL11p021821 Quercus lobata HOM05D005843 ORTHO05D007781 1.2e-47 195.3 581 28.9
BraA03t09456Z Brassica rapa HOM05D005843 ORTHO05D007781 1.5e-47 194.9 544 29.2
BcaB01g06160 Brassica carinata HOM05D005843 ORTHO05D007781 5.8e-47 193.0 530 29.8
C03p00940 Brassica napus HOM05D005843 ORTHO05D007781 5.8e-47 193.0 530 29.8
BolC3t12656H Brassica oleracea HOM05D005843 ORTHO05D007781 5.8e-47 193.0 530 29.8
CSS0035027 Camellia sinensis var. sinensis HOM05D005843 ORTHO05D007781 7.6e-47 192.6 467 30.8
FAN02G2362 Fragaria x ananassa HOM05D005843 ORTHO05D007781 1.1e-45 188.7 563 28.2
Dinv35609 Davidia involucrata HOM05D005843 ORTHO05D007781 3.2e-45 187.2 452 33.4
AUR62030297 Chenopodium quinoa HOM05D005843 ORTHO05D007781 3.5e-44 183.7 619 28.6
Glyma.18G179500 Glycine max HOM05D005843 ORTHO05D007781 7.9e-44 182.6 525 29.3
Os04g0503700 Oryza sativa ssp. japonica HOM05D005843 ORTHO05D007781 1.3e-43 181.8 512 29.1
Mapoly0047s0019 Marchantia polymorpha HOM05D005843 ORTHO05D007781 4.3e-42 176.8 550 28.7
Aa31LG1G22390 Aethionema arabicum HOM05D005843 ORTHO05D007781 9.6e-42 175.6 606 26.7
AUR62015928 Chenopodium quinoa HOM05D005843 ORTHO05D007781 2.4e-40 171.0 520 29.2
arahy.Tifrunner.gnm1.ann1.HAEF8J Arachis hypogaea HOM05D005843 ORTHO05D007781 1.2e-39 168.7 387 32.6
Lj3g0024665 Lotus japonicus HOM05D005843 ORTHO05D007781 2.6e-39 167.5 467 29.1
Hma1.2p1_1513F.1_g288030 Hydrangea macrophylla HOM05D005843 ORTHO05D007781 4.9e-38 163.3 511 29.9
Sabra06G0064400 Salix brachista HOM05D005843 ORTHO05D007781 3.2e-37 160.6 541 29.6
unitig_26.g9195 Utricularia gibba HOM05D005843 ORTHO05D007781 1.1e-34 152.1 498 27.9
FvH4_6g13910 Fragaria vesca HOM05D005843 ORTHO05D007781 1.6e-33 148.3 358 32.4
CBR_g29861 Chara braunii HOM05D005843 ORTHO05D000002 2.6e-31 141.0 258 36.4
AagrBONN_evm.TU.Sc2ySwM_117.1914 Anthoceros agrestis HOM05D005843 ORTHO05D007781 6.5e-30 136.3 476 27.3
AUR62018365 Chenopodium quinoa HOM05D005843 ORTHO05D007781 6.5e-30 136.3 363 30.6
Zm00001eb078080 Zea mays HOM05D005843 ORTHO05D007781 8.7e-27 125.9 257 32.3
ATR0585G056 Amborella trichopoda HOM05D005843 ORTHO05D007781 6.3e-25 119.8 362 29.3
Potri.006G084800 Populus trichocarpa HOM05D005843 ORTHO05D007781 8.2e-25 119.4 257 32.7
Nitab4.5_0002018g0090 Nicotiana tabacum HOM05D005843 ORTHO05D007781 9.0e-24 115.9 213 36.2
Dinv37176 Davidia involucrata HOM05D005843 ORTHO05D007781 3.4e-23 114.0 257 33.1
A03p00710 Brassica napus HOM05D005843 ORTHO05D007781 7.7e-23 112.8 213 35.7
SGA_v2.0_scaffold75G24944 Striga asiatica HOM05D005843 ORTHO05D007781 2.1e-20 104.8 276 30.4
vmacro20152 Vaccinium macrocarpon HOM05D005843 ORTHO05D007781 6.1e-20 103.2 432 27.1
BcaC06g31987 Brassica carinata HOM05D005843 ORTHO05D007781 7.9e-20 102.8 356 27.8
CDE09G0345 Ceratophyllum demersum HOM05D005843 ORTHO05D007781 2.2e-17 94.7 368 27.2
TAR636G2087 Trochodendron aralioides HOM05D005843 ORTHO05D007781 4.8e-17 93.6 154 38.3
Haze_26583 Corylus avellana HOM05D005843 ORTHO05D007781 7.7e-15 86.3 210 33.8
DCAR_015734 Daucus carota HOM05D005843 ORTHO05D007781 1.6e-12 78.6 120 39.2
TAR636G1000 Trochodendron aralioides HOM05D005843 ORTHO05D007781 1.6e-12 78.6 166 36.7
TAR636G1324 Trochodendron aralioides HOM05D005843 ORTHO05D007781 1.6e-12 78.6 166 36.7
VMungo1309G2290 Vigna mungo HOM05D005843 ORTHO05D007781 2.2e-09 68.2 179 30.7
SEGI_08652 Sequoiadendron giganteum HOM05D005843 ORTHO05D000001 1.1e-08 65.9 47 53.2
BcaNung05921 Brassica carinata HOM05D002515 ORTHO05D002722 4.5e-07 60.5 371 23.5
DCAR_015735 Daucus carota HOM05D005843 ORTHO05D007781 5.9e-07 60.1 42 59.5
AUR62040681 Chenopodium quinoa HOM05D005843 ORTHO05D007781 2.2e-06 58.2 75 45.3
SEGI_06123 Sequoiadendron giganteum HOM05D005843 ORTHO05D007781 2.2e-06 58.2 75 45.3


User provided reference genes

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