Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cre01.g033516 Chlamydomonas reinhardtii HOM05D005940 ORTHO05D007027 6.3e-212 740.7 433 100.0
Cre01.g033763 Chlamydomonas reinhardtii HOM05D005940 ORTHO05D007027 5.6e-27 126.3 69 98.6
Eucgr.G02795 Eucalyptus grandis HOM05D005940 ORTHO05D007027 5.1e-12 76.6 187 32.6
FAN10G2498 Fragaria x ananassa HOM05D005940 ORTHO05D007027 1.9e-11 74.7 206 31.6
TWI38G0416 Tripterygium wilfordii HOM05D005940 ORTHO05D007027 4.3e-11 73.6 191 32.5
AagrBONN_evm.TU.Sc2ySwM_344.1014 Anthoceros agrestis HOM05D005940 ORTHO05D007027 5.6e-11 73.2 192 30.7
FAN03G1319 Fragaria x ananassa HOM05D005940 ORTHO05D007027 1.6e-10 71.6 206 30.1
Nn2g10645 Nelumbo nucifera HOM05D005940 ORTHO05D007027 3.6e-10 70.5 203 31.5
CDE11G0619 Ceratophyllum demersum HOM05D005940 ORTHO05D007027 8.1e-10 69.3 200 30.5
Oeu055049.1 Olea europaea HOM05D005940 ORTHO05D007027 8.1e-10 69.3 202 29.7
Migut.F01794 Erythranthe guttata HOM05D005940 ORTHO05D007027 1.1e-09 68.9 174 32.2
FAN06G4195 Fragaria x ananassa HOM05D005940 ORTHO05D007027 1.1e-09 68.9 206 29.6
BcaB01g00141 Brassica carinata HOM05D005940 ORTHO05D007027 1.8e-09 68.2 171 31.0
A09p47960 Brassica napus HOM05D005940 ORTHO05D007027 1.8e-09 68.2 171 31.0
FvH4_7g20280 Fragaria vesca HOM05D005940 ORTHO05D007027 2.4e-09 67.8 206 29.6
Medtr1g103900 Medicago truncatula HOM05D005940 ORTHO05D007027 2.4e-09 67.8 191 30.9
SMO201G0153 Selaginella moellendorffii HOM05D005940 ORTHO05D007027 2.4e-09 67.8 200 30.0
Lj5g0027680 Lotus japonicus HOM05D005940 ORTHO05D007027 3.1e-09 67.4 202 30.2
Medtr1g030720 Medicago truncatula HOM05D005940 ORTHO05D007027 3.1e-09 67.4 191 31.4
VMungo0720G1649 Vigna mungo HOM05D005940 ORTHO05D007027 3.1e-09 67.4 191 31.4
Atru.chr12.628 Acer truncatum HOM05D005940 ORTHO05D007027 5.3e-09 66.6 187 29.4
FAN01G1689 Fragaria x ananassa HOM05D005940 ORTHO05D007027 5.3e-09 66.6 194 30.4
Psat6g207800 Pisum sativum HOM05D005940 ORTHO05D007027 5.3e-09 66.6 191 30.9
CARHR164970 Cardamine hirsuta HOM05D005940 ORTHO05D007027 6.9e-09 66.2 172 29.7
AUR62020800 Chenopodium quinoa HOM05D005940 ORTHO05D007027 6.9e-09 66.2 202 30.7
Phvul.007G056900 Phaseolus vulgaris HOM05D005940 ORTHO05D007027 6.9e-09 66.2 191 31.4
Sp5g07450 Schrenkiella parvula HOM05D005940 ORTHO05D007027 6.9e-09 66.2 172 29.1
SMO329G0058 Selaginella moellendorffii HOM05D005940 ORTHO05D007027 6.9e-09 66.2 182 28.0
Solyc04g049890.4 Solanum lycopersicum HOM05D005940 ORTHO05D007027 6.9e-09 66.2 203 30.0
CAN.G693.9 Capsicum annuum HOM05D005940 ORTHO05D007027 9.0e-09 65.9 210 30.5
THA.LOC104809986 Tarenaya hassleriana HOM05D005940 ORTHO05D007027 9.0e-09 65.9 204 29.4
Glyma.20G145700 Glycine max HOM05D005940 ORTHO05D007027 1.2e-08 65.5 191 31.4
BolC8t50626H Brassica oleracea HOM05D005940 ORTHO05D007027 1.5e-08 65.1 171 29.8
CsaV3_5G006320 Cucumis sativus L. HOM05D005940 ORTHO05D007027 1.5e-08 65.1 189 31.7
BraA09t40251Z Brassica rapa HOM05D005940 ORTHO05D007027 2.0e-08 64.7 171 30.4
MELO3C011725.2 Cucumis melo HOM05D005940 ORTHO05D007027 2.0e-08 64.7 85 48.2
Mapoly0016s0023 Marchantia polymorpha HOM05D005940 ORTHO05D007027 3.4e-08 63.9 190 32.6
Peaxi162Scf00208g00211 Petunia axillaris HOM05D005940 ORTHO05D007027 3.4e-08 63.9 203 30.0
Nitab4.5_0003582g0030 Nicotiana tabacum HOM05D005940 ORTHO05D007027 4.5e-08 63.5 203 31.0
HanXRQChr16g0510921 Helianthus annuus HOM05D005940 ORTHO05D007027 5.8e-08 63.2 229 27.5
PRCOL_00002155 Prasinoderma coloniale HOM05D005940 ORTHO05D007027 5.8e-08 63.2 197 38.6
TAR623G0325 Trochodendron aralioides HOM05D005940 ORTHO05D007027 5.8e-08 63.2 188 29.8
Zm00001eb194920 Zea mays HOM05D005940 ORTHO05D007027 5.8e-08 63.2 201 30.8
Aqoxy7G03246 Aquilegia oxysepala HOM05D005940 ORTHO05D007027 7.6e-08 62.8 203 31.0
BcaNung04648 Brassica carinata HOM05D005940 ORTHO05D007027 9.9e-08 62.4 171 29.2
C08p30200 Brassica napus HOM05D005940 ORTHO05D007027 9.9e-08 62.4 171 29.2
RcHm_v2.0_Chr1g0364231 Rosa chinensis HOM05D005940 ORTHO05D007027 9.9e-08 62.4 206 30.1
DCAR_019137 Daucus carota HOM05D005940 ORTHO05D007027 1.3e-07 62.0 186 28.0
Cc09_g02600 Coffea canephora HOM05D005940 ORTHO05D007027 1.7e-07 61.6 173 31.2
PSO170G0010 Papaver somniferum HOM05D005940 ORTHO05D007027 1.7e-07 61.6 188 31.4
ClCG02G013840 Citrullus lanatus HOM05D005940 ORTHO05D007027 2.2e-07 61.2 205 29.8
Medtr1g103870 Medicago truncatula HOM05D005940 ORTHO05D007027 2.2e-07 61.2 186 30.6
Sed0018989 Sechium edule HOM05D005940 ORTHO05D007027 2.2e-07 61.2 205 27.3
AL5G36080 Arabidopsis lyrata HOM05D005940 ORTHO05D007027 2.9e-07 60.8 172 28.5
Cfa001588 Carpinus fangiana HOM05D005940 ORTHO05D007027 2.9e-07 60.8 207 29.5
PGR102G2278 Punica granatum HOM05D005940 ORTHO05D007027 2.9e-07 60.8 184 29.3
SGA_v2.0_scaffold122G33246 Striga asiatica HOM05D005940 ORTHO05D007027 2.9e-07 60.8 80 46.2
EL10Ac2g03550 Beta vulgaris HOM05D005940 ORTHO05D007027 3.8e-07 60.5 191 31.4
Ciclev10033357m.g Citrus clementina HOM05D005940 ORTHO05D007027 3.8e-07 60.5 213 27.2
Hma1.2p1_0192F.1_g083550 Hydrangea macrophylla HOM05D005940 ORTHO05D007027 4.9e-07 60.1 204 29.9
Hma1.2p1_0192F.1_g083560 Hydrangea macrophylla HOM05D005940 ORTHO05D007027 4.9e-07 60.1 204 29.9
Prupe.2G219400 Prunus persica HOM05D005940 ORTHO05D007027 4.9e-07 60.1 203 27.6
QL08p056963 Quercus lobata HOM05D005940 ORTHO05D007027 4.9e-07 60.1 195 28.7
CANSAT25G0128 Cannabis sativa HOM05D005940 ORTHO05D007027 6.4e-07 59.7 214 28.5
ECA232G2986 Erigeron canadensis HOM05D005940 ORTHO05D007027 6.4e-07 59.7 174 31.0
Lalb_Chr21g0304671 Lupinus albus HOM05D005940 ORTHO05D007027 6.4e-07 59.7 186 30.1
CiPaw.02G177100 Carya illinoinensis HOM05D005940 ORTHO05D007027 8.4e-07 59.3 188 28.2
Pp3c1_190 Physcomitrium patens HOM05D005940 ORTHO05D007027 8.4e-07 59.3 172 31.4
Prupe.2G216400 Prunus persica HOM05D005940 ORTHO05D007027 8.4e-07 59.3 203 27.6
TPR.G5540 Trifolium pratense HOM05D005940 ORTHO05D007027 8.4e-07 59.3 181 29.8
HPP92_019787 Vanilla planifolia HOM05D005940 ORTHO05D007027 8.4e-07 59.3 192 31.2
Carub.0005s2159 Capsella rubella HOM05D005940 ORTHO05D007027 1.1e-06 58.9 180 28.3
Gohir.D04G082400 Gossypium hirsutum HOM05D005940 ORTHO05D007027 1.1e-06 58.9 188 30.9
Lsat_1_v5_gn_1_128021 Lactuca sativa HOM05D005940 ORTHO05D007027 1.1e-06 58.9 194 25.8
Thhalv10010491m.g Eutrema salsugineum HOM05D005940 ORTHO05D007027 1.9e-06 58.2 180 28.3
Nitab4.5_0000061g0280 Nicotiana tabacum HOM05D005940 ORTHO05D007027 1.9e-06 58.2 203 29.1
Gorai.012G093100 Gossypium raimondii HOM05D005940 ORTHO05D007027 2.4e-06 57.8 188 30.9
Haze_16942 Corylus avellana HOM05D005940 ORTHO05D007027 3.2e-06 57.4 89 43.8
Os02g0252600 Oryza sativa ssp. japonica HOM05D005940 ORTHO05D007027 3.2e-06 57.4 85 42.4
AT3G54970 Arabidopsis thaliana HOM05D005940 ORTHO05D007027 4.2e-06 57.0 66 50.0
Sabra10G0167600 Salix brachista HOM05D005940 ORTHO05D007027 4.2e-06 57.0 80 46.2
Sopen04g020430 Solanum pennellii HOM05D005940 ORTHO05D007027 4.2e-06 57.0 210 28.6
Ca_10908_v3 Cicer arietinum L. HOM05D005940 ORTHO05D007027 5.5e-06 56.6 191 29.8
GSVIVG01016348001 Vitis vinifera HOM05D005940 ORTHO05D007027 5.5e-06 56.6 194 28.9
Manes.10G041400 Manihot esculenta HOM05D005940 ORTHO05D007027 7.1e-06 56.2 84 44.0
Medtr1g030710 Medicago truncatula HOM05D005940 ORTHO05D007027 7.1e-06 56.2 76 47.4
PGR142G2620 Punica granatum HOM05D005940 ORTHO05D007027 7.1e-06 56.2 60 50.0
PGSC0003DMG400010575 Solanum tuberosum HOM05D005940 ORTHO05D007027 7.1e-06 56.2 203 29.6
MD01G1112500 Malus domestica HOM05D005940 ORTHO05D007027 9.3e-06 55.8 186 30.6
Potri.010G216500 Populus trichocarpa HOM05D005940 ORTHO05D007027 9.3e-06 55.8 189 30.7
Rhsim09G0154600 Rhododendron simsii HOM05D005940 ORTHO05D007027 9.3e-06 55.8 90 42.2
SEGI_22112 Sequoiadendron giganteum HOM05D005940 ORTHO05D007027 9.3e-06 55.8 59 49.2


User provided reference genes

Program Settings