Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cre01.g030350 Chlamydomonas reinhardtii HOM05D007052 ORTHO05D008871 3.8e-82 308.1 157 100.0
Cre07.g339000 Chlamydomonas reinhardtii HOM05D007052 ORTHO05D008871 4.7e-24 115.2 129 51.2
CSS0050367 Camellia sinensis var. sinensis HOM05D007052 ORTHO05D008871 6.1e-16 88.2 116 44.8
Carub.0006s3216 Capsella rubella HOM05D007052 ORTHO05D008871 1.0e-15 87.4 123 43.1
Pp3c25_6660 Physcomitrium patens HOM05D007052 ORTHO05D008871 1.0e-15 87.4 123 43.1
Migut.M01374 Erythranthe guttata HOM05D007052 ORTHO05D008871 1.4e-15 87.0 123 39.8
A09p26390 Brassica napus HOM05D007052 ORTHO05D008871 3.0e-15 85.9 123 43.1
BraA09t38213Z Brassica rapa HOM05D007052 ORTHO05D008871 3.0e-15 85.9 123 43.1
BcaC04g21282 Brassica carinata HOM05D007052 ORTHO05D008871 4.0e-15 85.5 123 43.1
C09p33580 Brassica napus HOM05D007052 ORTHO05D008871 4.0e-15 85.5 123 43.1
BolC9t56192H Brassica oleracea HOM05D007052 ORTHO05D008871 4.0e-15 85.5 123 43.1
Dinv20100 Davidia involucrata HOM05D007052 ORTHO05D008871 4.0e-15 85.5 123 42.3
Sed0006602 Sechium edule HOM05D007052 ORTHO05D008871 4.0e-15 85.5 123 41.5
AT4G04330 Arabidopsis thaliana HOM05D007052 ORTHO05D008871 5.2e-15 85.1 123 42.3
Cfa000169 Carpinus fangiana HOM05D007052 ORTHO05D008871 5.2e-15 85.1 123 43.1
Haze_06850 Corylus avellana HOM05D007052 ORTHO05D008871 5.2e-15 85.1 123 44.7
MD05G1351600 Malus domestica HOM05D007052 ORTHO05D008871 5.2e-15 85.1 123 43.9
Manes.17G028000 Manihot esculenta HOM05D007052 ORTHO05D008871 5.2e-15 85.1 123 39.8
MD10G1325900 Malus domestica HOM05D007052 ORTHO05D008871 6.8e-15 84.7 123 43.9
BcaB01g01799 Brassica carinata HOM05D007052 ORTHO05D008871 8.9e-15 84.3 123 42.3
CARHR253150 Cardamine hirsuta HOM05D007052 ORTHO05D008871 8.9e-15 84.3 123 42.3
PSO541G4001 Papaver somniferum HOM05D007052 ORTHO05D008871 8.9e-15 84.3 123 42.3
Actinidia11870 Actinidia chinensis HOM05D007052 ORTHO05D008871 1.5e-14 83.6 132 40.2
Lj1A1235T90 Lonicera japonica HOM05D007052 ORTHO05D008871 1.5e-14 83.6 123 41.5
Lj6g0012328 Lotus japonicus HOM05D007052 ORTHO05D008871 1.5e-14 83.6 124 42.7
Rhsim02G0105300 Rhododendron simsii HOM05D007052 ORTHO05D008871 1.5e-14 83.6 130 40.8
TPR.G13090 Trifolium pratense HOM05D007052 ORTHO05D008871 1.5e-14 83.6 124 41.1
AagrBONN_evm.TU.Sc2ySwM_117.3173 Anthoceros agrestis HOM05D007052 ORTHO05D008871 2.0e-14 83.2 123 42.3
EL10Ac8g20122 Beta vulgaris HOM05D007052 ORTHO05D008871 2.0e-14 83.2 123 42.3
ECA248G2484 Erigeron canadensis HOM05D007052 ORTHO05D008871 2.0e-14 83.2 123 43.1
Gohir.A10G011300 Gossypium hirsutum HOM05D007052 ORTHO05D008871 2.0e-14 83.2 136 39.7
Gorai.011G012000 Gossypium raimondii HOM05D007052 ORTHO05D008871 2.0e-14 83.2 136 39.7
Thecc.06G227100 Theobroma cacao HOM05D007052 ORTHO05D008871 2.0e-14 83.2 136 39.0
VMungo0540G2459 Vigna mungo HOM05D007052 ORTHO05D008871 2.0e-14 83.2 122 42.6
Aqoxy1G03011 Aquilegia oxysepala HOM05D007052 ORTHO05D008871 2.6e-14 82.8 131 41.2
AL6G47870 Arabidopsis lyrata HOM05D007052 ORTHO05D008871 2.6e-14 82.8 123 42.3
Cc09_g01290 Coffea canephora HOM05D007052 ORTHO05D008871 2.6e-14 82.8 123 40.7
Gohir.D06G156800 Gossypium hirsutum HOM05D007052 ORTHO05D008871 3.4e-14 82.4 123 40.7
PSO675G2240 Papaver somniferum HOM05D007052 ORTHO05D008871 3.4e-14 82.4 123 41.5
TAR627G0466 Trochodendron aralioides HOM05D007052 ORTHO05D008871 3.4e-14 82.4 123 41.5
Duzib235G0934 Durio zibethinus HOM05D007052 ORTHO05D008871 4.4e-14 82.0 136 37.5
Aa31LG9G9870 Aethionema arabicum HOM05D007052 ORTHO05D008871 5.7e-14 81.6 123 41.5
Glyma.15G111400 Glycine max HOM05D007052 ORTHO05D008871 5.7e-14 81.6 122 42.6
Phvul.006G146300 Phaseolus vulgaris HOM05D007052 ORTHO05D008871 5.7e-14 81.6 122 42.6
PRCOL_00003846 Prasinoderma coloniale HOM05D007052 ORTHO05D008871 5.7e-14 81.6 145 35.2
Sp6g04520 Schrenkiella parvula HOM05D007052 ORTHO05D008871 5.7e-14 81.6 123 41.5
THA.LOC104812978 Tarenaya hassleriana HOM05D007052 ORTHO05D008871 5.7e-14 81.6 123 41.5
Glyma.09G007000 Glycine max HOM05D007052 ORTHO05D008871 7.5e-14 81.3 122 42.6
PGR042G3505 Punica granatum HOM05D007052 ORTHO05D008871 7.5e-14 81.3 123 41.5
TWI38G1879 Tripterygium wilfordii HOM05D007052 ORTHO05D008871 7.5e-14 81.3 123 40.7
Ca_00688_v3 Cicer arietinum L. HOM05D007052 ORTHO05D008871 9.8e-14 80.9 123 40.7
Lsat_1_v5_gn_1_129560 Lactuca sativa HOM05D007052 ORTHO05D008871 9.8e-14 80.9 123 42.3
Gohir.A06G150600 Gossypium hirsutum HOM05D007052 ORTHO05D008871 1.3e-13 80.5 123 39.8
SMO118G0387 Selaginella moellendorffii HOM05D007052 ORTHO05D008871 1.3e-13 80.5 117 41.9
Sc05g0009410 Simmondsia chinensis HOM05D007052 ORTHO05D008871 1.3e-13 80.5 123 39.8
ATR0624G054 Amborella trichopoda HOM05D007052 ORTHO05D008871 1.7e-13 80.1 123 41.5
SGA_v2.0_scaffold7G03781 Striga asiatica HOM05D007052 ORTHO05D008871 1.7e-13 80.1 123 42.3
MELO3C007415.2 Cucumis melo HOM05D007052 ORTHO05D008871 2.2e-13 79.7 146 37.0
vmacro15801 Vaccinium macrocarpon HOM05D007052 ORTHO05D008871 2.2e-13 79.7 128 39.8
ClCG01G021710 Citrullus lanatus HOM05D007052 ORTHO05D008871 2.8e-13 79.3 137 38.7
Sabra11G0007900 Salix brachista HOM05D007052 ORTHO05D008871 2.8e-13 79.3 123 39.8
CANSAT56G3240 Cannabis sativa HOM05D007052 ORTHO05D008871 3.7e-13 79.0 132 37.9
Potri.011G010300 Populus trichocarpa HOM05D007052 ORTHO05D008871 3.7e-13 79.0 123 39.0
Ciclev10016958m.g Citrus clementina HOM05D007052 ORTHO05D008871 4.9e-13 78.6 123 40.7
CsaV3_6G048750 Cucumis sativus L. HOM05D007052 ORTHO05D008871 6.3e-13 78.2 117 43.6
HanXRQChr01g0006501 Helianthus annuus HOM05D007052 ORTHO05D008871 8.3e-13 77.8 123 42.3
Lalb_Chr18g0056571 Lupinus albus HOM05D007052 ORTHO05D008871 8.3e-13 77.8 123 39.0
Medtr2g024300 Medicago truncatula HOM05D007052 ORTHO05D008871 8.3e-13 77.8 124 39.5
GSVIVG01012660001 Vitis vinifera HOM05D007052 ORTHO05D008871 8.3e-13 77.8 116 40.5
arahy.Tifrunner.gnm1.ann1.LNF63F Arachis hypogaea HOM05D007052 ORTHO05D008871 1.1e-12 77.4 122 40.2
arahy.Tifrunner.gnm1.ann1.MS5PCD Arachis hypogaea HOM05D007052 ORTHO05D008871 1.1e-12 77.4 122 40.2
CDE07G0375 Ceratophyllum demersum HOM05D000570 ORTHO05D001174 1.8e-12 76.6 123 40.7
COL.COLO4_31826 Corchorus olitorius HOM05D007052 ORTHO05D008871 2.4e-12 76.3 113 38.9
Os08g0425200 Oryza sativa ssp. japonica HOM05D007052 ORTHO05D008871 4.1e-12 75.5 123 38.2
DCAR_024989 Daucus carota HOM05D007052 ORTHO05D008871 9.2e-12 74.3 121 38.8
AUR62012751 Chenopodium quinoa HOM05D007052 ORTHO05D008871 1.7e-10 70.1 123 38.2
Hund23440 Selenicereus undatus HOM05D007052 ORTHO05D008871 2.3e-10 69.7 120 38.3
Ah.09g234570 Amaranthus hybridus HOM05D007052 ORTHO05D008871 1.1e-09 67.4 134 36.6
MCO13G382 Micromonas commoda HOM05D007052 ORTHO05D008871 1.5e-09 67.0 164 29.3
PRCOL_00003373 Prasinoderma coloniale HOM05D007052 ORTHO05D008871 5.6e-09 65.1 139 34.5
MCO09G711 Micromonas commoda HOM05D007052 ORTHO05D008871 1.6e-08 63.5 153 35.9
PRCOL_00002086 Prasinoderma coloniale HOM05D007052 ORTHO05D008871 3.6e-08 62.4 155 31.6
SalBow8G1921 Salvia bowleyana HOM05D007052 ORTHO05D008871 4.7e-08 62.0 94 41.5
Peaxi162Scf00178g00039 Petunia axillaris HOM05D007052 ORTHO05D008871 1.0e-07 60.8 121 33.9
QL05p072067 Quercus lobata HOM05D007052 ORTHO05D008871 1.4e-07 60.5 184 27.7
Hund21433 Selenicereus undatus HOM05D007052 ORTHO05D008871 1.8e-07 60.1 145 33.1
Thhalv10029002m.g Eutrema salsugineum HOM05D007052 ORTHO05D008871 5.2e-07 58.5 79 43.0
AUR62021907 Chenopodium quinoa HOM05D007052 ORTHO05D008871 8.9e-07 57.8 78 41.0
CiPaw.09G097200 Carya illinoinensis HOM05D007052 ORTHO05D008871 3.4e-06 55.8 72 43.1
Psat1g177840 Pisum sativum HOM05D007052 ORTHO05D008871 3.4e-06 55.8 80 41.2
MCO14G271 Micromonas commoda HOM05D007052 ORTHO05D008871 4.4e-06 55.5 128 35.2
Prupe.4G016000 Prunus persica HOM05D007052 ORTHO05D008871 5.8e-06 55.1 79 40.5
MCO07G222 Micromonas commoda HOM05D007052 ORTHO05D270181 9.8e-06 54.3 192 26.0
Nn1g07250 Nelumbo nucifera HOM05D007052 ORTHO05D008871 9.8e-06 54.3 78 39.7


User provided reference genes

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